Ravi Gupta

发表

CTCF binding site sequence differences are associated with unique regulatory and functional trends during embryonic stem cell differentiation

S. Hannenhalli, R. Davuluri, Robert N. Plasschaert, 2013, Nucleic acids research.

Alternative transcription and alternative splicing in cancer.

R. Davuluri, Ravi Gupta, Sharmistha Pal, 2012, Pharmacology & therapeutics.

the transcriptome diversity of cerebellar development Alternative transcription exceeds alternative splicing in generating Material Supplemental

Hyunsoo Kim, R. Davuluri, P. Wickramasinghe, 2011 .

Tree-Based Position Weight Matrix Approach to Model Transcription Factor Binding Site Profiles

Hyunsoo Kim, R. Davuluri, Ravi Gupta, 2011, PloS one.

ADAR1 Forms a Complex with Dicer to Promote MicroRNA Processing and RNA-Induced Gene Silencing

Ramana V. Davuluri, Masayuki Sakurai, Kentaro Ariyoshi, 2013, Cell.

Identification of Reprogrammed Myeloid Cell Transcriptomes in NSCLC

O. Elemento, S. Rafii, N. Altorki, 2015, PloS one.

Genome-wide mapping of RNA Pol-II promoter usage in mouse tissues by ChIP-seq.

Sharmistha Pal, Ramana V Davuluri, R. Davuluri, 2014, Methods in molecular biology.

Genome-wide mapping of RNA Pol-II promoter usage in mouse tissues by ChIP-seq

Francisco J. Agosto-Perez, Louise C. Showe, Tim Hui-Ming Huang, 2010, Nucleic Acids Res..

Bioinformatics Approaches to the Study of MicroRNAs

Ramana V. Davuluri, Ravi Gupta, R. Davuluri, 2014 .

The H3K27me3 Demethylase dUTX Is a Suppressor of Notch- and Rb-Dependent Tumors in Drosophila

A. Shilatifard, I. Hariharan, R. Davuluri, 2010, Molecular and Cellular Biology.

IsoformEx: isoform level gene expression estimation using weighted non-negative least squares from mRNA-Seq data

Hyunsoo Kim, Ramana V. Davuluri, Yingtao Bi, 2011, BMC Bioinformatics.

MPromDb update 2010: an integrated resource for annotation and visualization of mammalian gene promoters and ChIP-seq experimental data

Francisco J. Agosto-Perez, Ramana V. Davuluri, Ravi Gupta, 2010, Nucleic Acids Res..

Estimation of Gene Expression at Isoform Level from mRNA-Seq Data by Bayesian Hierarchical Modeling

Ravi Gupta, M. Bhattacharjee, R. V. Davuluri, 2012, Front. Gene..

Alternative transcription exceeds alternative splicing in generating the transcriptome diversity of cerebellar development.

Hyunsoo Kim, R. Davuluri, P. Wickramasinghe, 2011, Genome research.

Annotation of gene promoters by integrative data-mining of ChIP-seq Pol-II enrichment data

Ramana V. Davuluri, Sharmistha Pal, Ravi Gupta, 2010, BMC Bioinformatics.

Subtelomeric CTCF and cohesin binding site organization using improved subtelomere assemblies and a novel annotation pipeline

Sufen Hu, Harold Riethman, Evan E Eichler, 2014, Genome research.