D. Shin

发表

Crystal structure of conserved hypothetical protein Aq1575 from Aquifex aeolicus

Sung-Hou Kim, H. Yokota, R. Kim, 2002, Proceedings of the National Academy of Sciences of the United States of America.

Crystal structure of carboxylesterase from Pseudomonas fluorescens, an α/β hydrolase with broad substrate specificity

Ook Joon Yoo, Dong Hae Shin, D. Shin, 1997 .

Crystal structure of a conserved hypothetical protein from Escherichia coli

Sung-Hou Kim, H. Yokota, R. Kim, 2004, Journal of Structural and Functional Genomics.

Overview of Structural Genomics: Landscape, Premises, and Current Direction

Sung-Hou Kim, J. Chandonia, P. Adams, 2005 .

Neuroprotective effect of Cu,Zn-superoxide dismutase fused to a TCTP-derived protein transduction domain.

D. Shin, Kyunglim Lee, Hwa‐Jung Kim, 2011, European journal of pharmacology.

The Tetrameric Structure of Haemophilus influenzaHybrid Prx5 Reveals Interactions between Electron Donor and Acceptor Proteins*

Seong Eon Ryu, Dong Hae Shin, Dae Gwin Jeong, 2003, The Journal of Biological Chemistry.

Degradation of Redox-Sensitive Proteins including Peroxiredoxins and DJ-1 is Promoted by Oxidation-induced Conformational Changes and Ubiquitination

D. Shin, Jin-Hwan Cho, Jae-Jin Lee, 2016, Scientific Reports.

Novel Oxidative Modifications in Redox-Active Cysteine Residues*

Sun Choi, Eunok Paek, D. Shin, 2010, Molecular & Cellular Proteomics.

A preliminary X-ray study of 3-deoxy-D-manno-oct-2-ulosonic acid 8-phosphate phosphatase (YrbI) from Burkholderia pseudomallei.

D. Shin, Daeun Lee, Jimin Park, 2015, Acta crystallographica. Section F, Structural biology communications.

Structural analyses of peptide release factor 1 from Thermotoga maritima reveal domain flexibility required for its interaction with the ribosome.

Sung-Hou Kim, H. Yokota, R. Kim, 2004, Journal of molecular biology.

Structural Genomics of Minimal Organisms and Protein Fold Space

Paul D. Adams, Steven E. Brenner, Stephen R. Holbrook, 2005, Journal of Structural and Functional Genomics.

General assay for enzymes in the heptose biosynthesis pathways using electrospray ionization mass spectrometry

D. Shin, Daeun Lee, Jimin Park, 2017, Applied Microbiology and Biotechnology.

Expression and crystallographic studies of D-glycero-β-D-manno-heptose-1-phosphate adenylyltransferase from Burkholderia pseudomallei.

Hyojin Kim, D. Shin, Daeun Lee, 2017, Acta crystallographica. Section F, Structural biology communications.

A Preliminary X-ray Study of Murine Tnfaip8/Oxi-α

D. Shin, Daeun Lee, Mi‐Sun Kim, 2014, International journal of molecular sciences.

New molecular interaction of IIANtr and HPr from Burkholderia pseudomallei identified by X‐ray crystallography and docking studies

Chaok Seok, D. Shin, Mi‐Sun Kim, 2013, Proteins.

A preliminary X-ray study of transketolase from Burkholderia pseudomallei.

D. Shin, Daeun Lee, Jimin Park, 2012, Acta crystallographica. Section F, Structural biology and crystallization communications.

A preliminary X-ray study of D,D-heptose-1,7-bisphosphate phosphatase from Burkholderia thailandensis E264.

D. Shin, Mi Sun Kim, 2010, Acta crystallographica. Section F, Structural biology and crystallization communications.

Structural genomics of minimal organisms: pipeline and results.

Sung-Hou Kim, J. Chandonia, P. Adams, 2007, Methods in molecular biology.

GTP Preference of d-Glycero-α-d-manno-Heptose-1-Phosphate Guanylyltransferase from Yersinia pseudotuberculosis

D. Shin, Mi‐Sun Kim, Suwon Kim, 2019, International journal of molecular sciences.

Crystal structure of TM1457 from Thermotoga maritima.

Sung-Hou Kim, H. Yokota, R. Kim, 2005, Journal of structural biology.

Tyrosine 51 residue of the syndecan-2 extracellular domain is involved in the interaction with and activation of pro-matrix metalloproteinase-7

Weontae Lee, D. Shin, J. Yun, 2019, Scientific Reports.

Crystal structure of NusA from Thermotoga maritima and functional implication of the N-terminal domain.

Henry H Nguyen, Sung-Hou Kim, H. Yokota, 2003, Biochemistry.

Crystal structure of pharmaceutical-grade human serum albumin.

D. Shin, Mi‐Sun Kim, Jimin Park, 2020, International journal of biological macromolecules.

Structure of Nm23-H1 under oxidative conditions.

D. Shin, Mi‐Sun Kim, Kong-Joo Lee, 2013, Acta crystallographica. Section D, Biological crystallography.

Dimerization Tendency of 3CLpros of Human Coronaviruses Based on the X-ray Crystal Structure of the Catalytic Domain of SARS-CoV-2 3CLpro

D. Shin, S. Jo, Mi-Sun Kim, 2022, International journal of molecular sciences.

A preliminary X-ray study of sedoheptulose-7-phosphate isomerase from Burkholderia pseudomallei.

D. Shin, Mi Sun Kim, 2009, Acta crystallographica. Section F, Structural biology and crystallization communications.

A Study of 3CLpros as Promising Targets against SARS-CoV and SARS-CoV-2

D. Shin, Mi‐Sun Kim, Ja-Young Yoo, 2021, Microorganisms.

Crystal Structure of Hypothetical Fructose-Specific EIIB from Escherichia coli

Jooyoung Lee, E. Berry, D. Shin, 2016, Molecules and cells.

Transduction of translationally controlled tumor protein employing TCTP-derived protein transduction domain.

D. Shin, Kyunglim Lee, H. Kim, 2013, Analytical biochemistry.

Crystal structure of d-glycero-α-d-manno-heptose-1-phosphate guanylyltransferase from Yersinia pseudotuberculosis.

Hyojin Kim, D. Shin, Jimin Park, 2018, Biochimica et biophysica acta. Proteins and proteomics.

Preliminary structural studies on the MtxX protein from Methanococcus jannaschii.

D. Shin, 2008, Acta crystallographica. Section F, Structural biology and crystallization communications.

Inhibition of African swine fever virus protease by myricetin and myricitrin

D. Shin, Mi‐Sun Kim, Suwon Kim, 2020, Journal of enzyme inhibition and medicinal chemistry.

Expression and localization of translationally controlled tumor protein in rat urinary organs

D. Shin, Kyunglim Lee, Seong-Yeon Bae, 2012, Microscopy research and technique.

A Study of Drug Repurposing to Identify SARS-CoV-2 Main Protease (3CLpro) Inhibitors

D. Shin, N. Reig, Suwon Kim, 2022, International journal of molecular sciences.

Crystallization, molecular replacement solution, and refinement of tetrameric β‐amylase from sweet potato

S. Eom, D. Shin, J. Moon, 1995 .

Structural characterization of an iron–sulfur cluster assembly protein IscU in a zinc‐bound form

Sung-Hou Kim, H. Yokota, R. Kim, 2005, Proteins.

An artificially constructed dimer through deformation of a short zinc-binding loop.

Jooyoung Lee, K. Joo, D. Shin, 2018, Biochimica et biophysica acta. Proteins and proteomics.

Flavonoids with inhibitory activity against SARS-CoV-2 3CLpro

D. Shin, Mi‐Sun Kim, Dae Yong Kim, 2020, Journal of enzyme inhibition and medicinal chemistry.

Crystallization and preliminary X-ray analysis of neoagarobiose hydrolase from Saccharophagus degradans 2-40.

I. Choi, K. Kim, D. Shin, 2009, Acta crystallographica. Section F, Structural biology and crystallization communications.

Inhibition of SARS-CoV 3CL protease by flavonoids

D. Shin, Mi‐Sun Kim, Suwon Kim, 2019, Journal of enzyme inhibition and medicinal chemistry.

A study of Rose Bengal against a 2-keto-3-deoxy-d-manno-octulosonate cytidylyltransferase as an antibiotic candidate

D. Shin, Mi‐Sun Kim, Suwon Kim, 2020, Journal of enzyme inhibition and medicinal chemistry.

Dimerized Translationally Controlled Tumor Protein-Binding Peptide Ameliorates Atopic Dermatitis in NC/Nga Mice

D. Shin, Kyunglim Lee, J. Maeng, 2017, International journal of molecular sciences.

Inactivation of Peroxiredoxin I by Phosphorylation Allows Localized H2O2 Accumulation for Cell Signaling

Dae-Yeul Yu, Dong Hae Shin, Sue Goo Rhee, 2010, Cell.

Structural and molecular genetic insight into a widespread sulfur oxidation pathway.

Sung-Hou Kim, R. Kim, D. Shin, 2008, Journal of molecular biology.

Meclizine, a piperazine-derivative antihistamine, binds to dimerized translationally controlled tumor protein and attenuates allergic reactions in a mouse model.

D. Shin, Kyunglim Lee, Hae-duck Bae, 2023, Biomedicine & pharmacotherapy = Biomedecine & pharmacotherapie.

The cell penetrating ability of the proapoptotic peptide, KLAKLAKKLAKLAK fused to the N-terminal protein transduction domain of translationally controlled tumor protein, MIIYRDLISH.

D. Shin, Kyunglim Lee, H. Youn, 2011, Biomaterials.

Small molecule activator of Nm23/NDPK as an inhibitor of metastasis

D. Shin, Jimin Park, Kong-Joo Lee, 2018, Scientific Reports.

Crystal structure of a phosphatase with a unique substrate binding domain from Thermotoga maritima

Sung-Hou Kim, H. Yokota, R. Kim, 2003, Protein science : a publication of the Protein Society.

5-(4-Hydroxy-2,3,5-trimethylbenzylidene) thiazolidine-2,4-dione attenuates atherosclerosis possibly by reducing monocyte recruitment to the lesion

D. Shin, Mi‐Sun Kim, G. Oh, 2011, Experimental and Molecular Medicine.

Structure-based functional inference in structural genomics

Dong Hae Shin, Rosalind Kim, Sung-Hou Kim, 2004, Journal of Structural and Functional Genomics.

Crystal Structure of a Nicotinate Phosphoribosyltransferase from Thermoplasma acidophilum*

Sung-Hou Kim, H. Yokota, R. Kim, 2005, Journal of Biological Chemistry.

Interaction of translationally controlled tumor protein with Apaf-1 is involved in the development of chemoresistance in HeLa cells

D. Shin, Kyunglim Lee, Jaehoon Jung, 2014, BMC Cancer.

Crystal structure of YjeQ from Thermotoga maritima contains a circularly permuted GTPase domain.

Yun Lou, Dong Hae Shin, Rosalind Kim, 2004, Proceedings of the National Academy of Sciences of the United States of America.

Crystal structure of the DUF16 domain of MPN010 from Mycoplasma pneumoniae

Sung-Hou Kim, H. Yokota, R. Kim, 2006, Protein science : a publication of the Protein Society.

Crystal structure of tRNA (m1G37) methyltransferase from Aquifex aeolicus at 2.6 Å resolution: A novel methyltransferase fold

Rosalind Kim, Sung-Hou Kim, H. Yokota, 2003, Proteins.

Crystal structure analyses of uncomplexed ecotin in two crystal forms: Implications for its function and stability

D. Shin, S. Suh, C. Chung, 1996, Protein science : a publication of the Protein Society.

Structure and in silico substrate-binding mode of ADP-L-glycero-D-manno-heptose 6-epimerase from Burkholderia thailandensis.

D. Shin, Daeun Lee, Mi‐Sun Kim, 2013, Acta crystallographica. Section D, Biological crystallography.

A preliminary X-ray study of human nucleoside diphosphate kinase A under oxidative conditions.

D. Shin, Kong-Joo Lee, Mi Sun Kim, 2010, Acta crystallographica. Section F, Structural biology and crystallization communications.

Structural and enzymatic characterization of DR1281: A calcineurin‐like phosphoesterase from Deinococcus radiodurans

Sung-Hou Kim, H. Yokota, R. Kim, 2008, Proteins.

Cloning, expression, purification, crystallization and preliminary X-ray diffraction analysis of DsrEFH from Allochromatium vinosum.

D. Shin, C. Dahl, A. Schulte, 2007, Acta crystallographica. Section F, Structural biology and crystallization communications.

Crystal structure of ScpB from Chlorobium tepidum, a protein involved in chromosome partitioning

Sung-Hou Kim, H. Yokota, R. Kim, 2005, Proteins.

Crystal structure of a heat-inducible transcriptional repressor HrcA from Thermotoga maritima: structural insight into DNA binding and dimerization.

Sung-Hou Kim, P. Adams, H. Yokota, 2005, Journal of molecular biology.

Crystal structure of methenyltetrahydrofolate synthetase from Mycoplasma pneumoniae (GI: 13508087) at 2.2 Å resolution

Sung-Hou Kim, R. Kim, D. Shin, 2004, Proteins.

Crystal structure of a phosphotransacetylase from Streptococcus pyogenes

Sung-Hou Kim, H. Yokota, R. Kim, 2004, Proteins.

Structure of OsmC from Escherichia coli: a salt-shock-induced protein.

Sung-Hou Kim, I. Choi, H. Yokota, 2004, Acta crystallographica. Section D, Biological crystallography.

Comparison of solution and crystal structures of maize nonspecific lipid transfer protein: A model for a potential in vivo lipid carrier protein

D. Marion, D. Shin, Jae Young Lee, 1998, Proteins.

The Tnfaip8-PE complex is a novel upstream effector in the anti-autophagic action of insulin

D. Shin, Mi‐Sun Kim, Jimin Park, 2017, Scientific Reports.

A Study of a Potent Inhibitor Against a GDP-6-Deoxy-α-d-Manno-Heptose Biosynthesis Pathway as Antibiotic Candidates.

D. Shin, Mi‐Sun Kim, Suwon Kim, 2020, Microbial drug resistance.

Structure-based inference of molecular functions of proteins of unknown function from Berkeley Structural Genomics Center

In-Geol Choi, John-Marc Chandonia, Sung-Hou Kim, 2007, Journal of Structural and Functional Genomics.

Stepwise Oxidations Play Key Roles in the Structural and Functional Regulations of DJ-1.

D. Shin, Mi‐Sun Kim, Kong-Joo Lee, 2021, The Biochemical journal.

Stepwise Oxidations Play Key Roles in the Structural and Functional Regulations of DJ-1

J. Ferrell, D. Shin, Mi‐Sun Kim, 2021, bioRxiv.

Inhibition of d-glycero-β-d-manno-heptose 1-phosphate adenylyltransferase from Burkholderia pseudomallei by epigallocatechin gallate and myricetin.

D. Shin, Mi‐Sun Kim, Suwon Kim, 2020, The Biochemical journal.

Characteristics of flavonoids as potent MERS‐CoV 3C‐like protease inhibitors

Hyojin Kim, D. Shin, Mi‐Sun Kim, 2019, Chemical biology & drug design.

Crystal structure of D‐glycero‐Β‐D‐manno‐heptose‐1‐phosphate adenylyltransferase from Burkholderia pseudomallei

Hyojin Kim, D. Shin, Daeun Lee, 2018, Proteins.

Crystal Structure of Memapsin 2 (β-Secretase) in Complex with an Inhibitor OM00-3†

Lin Hong, Arun K. Ghosh, L. Hong, 2002 .

Crystal structure of memapsin 2 (beta-secretase) in complex with an inhibitor OM00-3.

Arun K. Ghosh, L. Hong, R. Turner, 2002, Biochemistry.

High-resolution crystal structure of the non-specific lipid-transfer protein from maize seedlings.

D. Shin, Jae Young Lee, S. Suh, 1995, Structure.

Calcium Ion Induced Structural Changes Promote Dimerization of Secretagogin, Which Is Required for Its Insulin Secretory Function

J. Ferrell, D. Shin, Jimin Park, 2017, Scientific Reports.

Small molecule activator of Nm23/NDPK as an inhibitor of metastasis

D. Shin, Jimin Park, Kong-Joo Lee, 2018, Scientific Reports.

Crystallization and preliminary X‐ray crystallographic analysis of phospholipid transfer protein from maize seedlings

R. Sweet, D. Shin, S. Suh, 1994, Proteins.

Structural genomics of minimal organisms: pipeline and results.

Sung-Hou Kim, J. Chandonia, P. Adams, 2007, Methods in molecular biology.

Crystal structure of a stress inducible protein from Mycoplasma pneumoniae at 2.85 Å resolution

Sung-Hou Kim, I. Choi, H. Yokota, 2003, Journal of Structural and Functional Genomics.

A study of inhibitors of d-glycero-β-d-manno-heptose-1-phosphate adenylyltransferase from Burkholderia pseudomallei as a potential antibiotic target

D. Shin, Mi‐Sun Kim, Suwon Kim, 2021, Journal of enzyme inhibition and medicinal chemistry.

Structural and molecular genetic insight into a widespread sulfur oxidation pathway.

Sung-Hou Kim, R. Kim, D. Shin, 2008, Journal of molecular biology.