Eric A. Johnson

发表

Rapid SNP Discovery and Genetic Mapping Using Sequenced RAD Markers

P. Etter, E. Selker, W. Cresko, 2008, PloS one.

SNP discovery and genotyping for evolutionary genetics using RAD sequencing.

P. Etter, W. Cresko, Eric A. Johnson, 2011, Methods in molecular biology.

Rapid and cost-effective polymorphism identification and genotyping using restriction site associated DNA (RAD) markers.

A. Amores, J. Dunham, W. Cresko, 2007, Genome research.

Local De Novo Assembly of RAD Paired-End Contigs Using Short Sequencing Reads

P. Etter, W. Cresko, Eric A. Johnson, 2011, PloS one.

Population Genomics of Parallel Adaptation in Threespine Stickleback using Sequenced RAD Tags

Nicholas Stiffler, Paul A. Hohenlohe, P. Etter, 2010, PLoS genetics.

High-Density Detection of Restriction-Site-Associated DNA Markers for Rapid Mapping of Mutated Loci in Neurospora

Nicholas Stiffler, Eric U. Selker, E. Selker, 2007, Genetics.

Massively parallel characterization of restriction endonucleases

Nick Kamps-Hughes, Eric A. Johnson, Zhenyu Zhu, 2013, Nucleic acids research.

A Survey of New Temperature-Sensitive, Embryonic-Lethal Mutations in C. elegans: 24 Alleles of Thirteen Genes

Sean M. O'Rourke, Bruce Bowerman, John H. Willis, 2011, PloS one.

The African Turquoise Killifish Genome Provides Insights into Evolution and Genetic Architecture of Lifespan

Param Priya Singh, C. Bustamante, A. Beyer, 2015, Cell.

Sgt1 acts via an LKB1/AMPK pathway to establish cortical polarity in larval neuroblasts.

C. Doe, Eric A. Johnson, Douglas W. Turnbull, 2012, Developmental biology.

Rapid Mapping and Identification of Mutations in Caenorhabditis elegans by Restriction Site-Associated DNA Mapping and Genomic Interval Pull-Down Sequencing

Eric A. Johnson, S. O’Rourke, J. Lowry, 2011, Genetics.

Genome-wide identification of hypoxia-induced enhancer regions

Eric A. Johnson, Jessica L. Preston, Nick Kamps-Hughes, 2015, PeerJ.

HIF Takes It Up a Notch

Eric A. Johnson, 2011, Science Signaling.

Reference‐free SNP discovery for the Eurasian beaver from restriction site–associated DNA paired‐end data

Z. Iqbal, T. Cezard, K. Gharbi, 2013, Molecular ecology.

Expression profiling of zebrafish sox9 mutants reveals that Sox9 is required for retinal differentiation.

J. Postlethwait, Yi-Lin Yan, Hayato Yokoi, 2009, Developmental biology.

Elevated CO2 suppresses specific Drosophila innate immune responses and resistance to bacterial infection

J. Sznajder, Eric A. Johnson, I. T. Helenius, 2009, Proceedings of the National Academy of Sciences.

Induction of the Heat Shock Pathway during Hypoxia Requires Regulation of Heat Shock Factor by Hypoxia-inducible Factor-1*

Eric A. Johnson, Douglas W. Turnbull, N. Baird, 2006, Journal of Biological Chemistry.

Construction and application for QTL analysis of a Restriction Site Associated DNA (RAD) linkage map in barley

Patrick M Hayes, Alfonso Cuesta-Marcos, Eric A. Johnson, 2011, BMC Genomics.

A southern African origin and cryptic structure in the highly mobile plains zebra

P. Etter, L. Orlando, A. Albrechtsen, 2018, Nature Ecology & Evolution.

Phylogeographic Analyses of American Black Bears (Ursus americanus) Suggest Four Glacial Refugia and Complex Patterns of Postglacial Admixture.

Emily E. Puckett, P. Etter, Eric A. Johnson, 2015, Molecular biology and evolution.

Rapid identification and recovery of ENU-induced mutations with next-generation sequencing and Paired-End Low-Error analysis

Eric A. Johnson, D. Doherty, Ian G. Phelps, 2015, BMC Genomics.

High-specificity detection of rare alleles with Paired-End Low Error Sequencing (PELE-Seq)

P. Phillips, Ariel E. Royall, Eric A. Johnson, 2016, BMC Genomics.

Cryptic patterns of speciation in cryptic primates: microendemic mouse lemurs and the multispecies coalescent

P. Etter, A. Yoder, L. Chikhi, 2019, bioRxiv.

RAD marker microarrays enable rapid mapping of zebrafish mutations

John H Postlethwait, J. Postlethwait, Yi-Lin Yan, 2007, Genome Biology.

RAD paired-end sequencing for local de novo assembly and SNP discovery in non-model organisms.

P. Etter, Eric A. Johnson, 2012, Methods in molecular biology.

Creation of a minimal tiling path of genomic clones for Drosophila: provision of a common resource.

E. Furlong, J. Hoheisel, S. Celniker, 2004, BioTechniques.

Genomic patterns of introgression in rainbow and westslope cutthroat trout illuminated by overlapping paired‐end RAD sequencing

G. Luikart, F. Allendorf, Eric A. Johnson, 2013, Molecular ecology.

From promise to practice: pairing non-invasive sampling with genomics in conservation

P. Etter, Eric A. Johnson, M. Russello, 2015, PeerJ.

Identification and function of hypoxia-response genes in Drosophila melanogaster.

Eric A. Johnson, Guowen Liu, J. Roy, 2006, Physiological genomics.

Rapid identification and recovery of ENU-induced mutations with next-generation sequencing and Paired-End Low-Error analysis

Eric A. Johnson, D. Doherty, Ian G. Phelps, 2015, BMC Genomics.

Genomic Resources Notes Accepted 1 December 2014 – 31 January 2015

P. Etter, T. Goldberg, C. Chapman, 2015, Molecular ecology resources.

Mapping with RAD (restriction-site associated DNA) markers to rapidly identify QTL for stem rust resistance in Lolium perenne

Eric A. Johnson, W. Pfender, M. Saha, 2011, Theoretical and Applied Genetics.

Distributed under Creative Commons Cc-by 4.0 Genome-wide Identification of Hypoxia-induced Enhancer Regions

Eric A. Johnson, Jessica L. Preston, Nick Kamps-Hughes, 2022 .

Permissive hypercapnia and ARDS: balancing inflammation and infection

J. Sznajder, Eric A. Johnson, M. Leonard, 2013 .

The African Turquoise Killifish Genome Provides Insights into Evolution and Genetic Architecture of Lifespan

Param Priya Singh, C. Bustamante, A. Beyer, 2015, Cell.

SNP discovery in Zea mays using sequenced restriction-site associated DNA markers.

T. S. Atwood, Eric A. Johnson, J. Boone, 2010 .

Cryptic Patterns of Speciation in Cryptic Primates: Microendemic Mouse Lemurs and the Multispecies Coalescent.

A. Yoder, L. Chikhi, Eric A. Johnson, 2020, Systematic biology.

Genome-wide analyses of the Bemisia tabaci species complex reveal contrasting patterns of admixture and complex demographic histories

P. Etter, M. Fumagalli, Eric A. Johnson, 2018, PloS one.

Genotyping on High Throughput Sequencers: Preparation and Analysis of Reduced Representation Genomic Libraries

Organizer, Eric A. Johnson, C. Rosato, 2012 .