J. Leigh

发表

Evaluating Phylogenetic Congruence in the Post-Genomic Era

F. Lapointe, J. Leigh, P. Lopez, 2011, Genome biology and evolution.

Phylogenomic analyses support the monophyly of Taphrinomycotina, including Schizosaccharomyces fission yeasts.

B. Lang, H. Philippe, H. Brinkmann, 2008, Molecular biology and evolution.

Phylogenomic analyses support the monophyly of Excavata and resolve relationships among eukaryotic “supergroups”

L. Hug, B. Lang, A. Simpson, 2009, Proceedings of the National Academy of Sciences.

Visualizing and assessing phylogenetic congruence of core gene sets: a case study of the gamma-proteobacteria.

W. Doolittle, E. Susko, J. Leigh, 2006, Molecular biology and evolution.

Do orthologous gene phylogenies really support tree-thinking?

W. Doolittle, R. L. Charlebois, E. Susko, 2005, BMC Evolutionary Biology.

Phylogenetic reconstruction and lateral gene transfer.

Yan Boucher, Eric Bapteste, W. Doolittle, 2004, Trends in microbiology.

Monte Carlo Strategies for Selecting Parameter Values in Simulation Experiments.

D. Bryant, J. Leigh, 2015, Systematic biology.

Parameter Exploration in Simulation Experiments: A Bayesian Framework

D. Bryant, J. Leigh, Jessica W. Leigh, 2012, 1205.4503.

A multi-locus time-calibrated phylogeny of the brown algae (Heterokonta, Ochrophyta, Phaeophyceae): Investigating the evolutionary nature of the "brown algal crown radiation".

C. Cruaud, J. Leigh, H. Verbruggen, 2010, Molecular phylogenetics and evolution.

popart: full‐feature software for haplotype network construction

David Bryant, D. Bryant, J. Leigh, 2015 .

A comparison of three fission yeast mitochondrial genomes.

B. Lang, J. Leigh, L. Forget, 2003, Nucleic acids research.

Hybridization may facilitate in situ survival of endemic species through periods of climate change

M. Steel, P. Lockhart, J. Leigh, 2013 .

7 - Evolution of the Fungi and their Mitochondrial Genomes

B. Lang, J. Leigh, E. Seif, 2003 .

Invasion and Persistence of a Selfish Gene in the Cnidaria

A. Roger, J. Leigh, M. Goddard, 2006, PloS one.

The Diversity of Mitochondrion-Related Organelles Amongst Eukaryotic Microbes

L. Hug, A. Roger, J. Leigh, 2007 .

Network analyses structure genetic diversity in independent genetic worlds

Eric Bapteste, Philippe Lopez, J. Leigh, 2009, Proceedings of the National Academy of Sciences.

Let them fall where they may: congruence analysis in massive phylogenetically messy data sets.

Klaus Schliep, Eric Bapteste, Philippe Lopez, 2011, Molecular biology and evolution.

Mitochondrial 3' tRNA editing in the jakobid Seculamonas ecuadoriensis: a novel mechanism and implications for tRNA processing.

B. Lang, J. Leigh, Jessica W. Leigh, 2004, RNA.

Testing congruence in phylogenomic analysis.

Edward Susko, E. Susko, A. Roger, 2008, Systematic biology.

Comparative mitochondrial genomics in zygomycetes: bacteria-like RNase P RNAs, mobile elements and a close source of the group I intron invasion in angiosperms

B. Lang, J. Leigh, Yu Liu, 2005, Nucleic acids research.

Molecular phylogeny of diplomonads and enteromonads based on SSU rRNA, alpha-tubulin and HSP90 genes: Implications for the evolutionary history of the double karyomastigont of diplomonads

A. Simpson, A. Roger, J. Flegr, 2008, BMC Evolutionary Biology.

Fungal Evolution Meets Fungal Genomics

Naiara Rodríguez-Ezpeleta, B. Franz Lang, Yannick Jacob, 2003 .

Alternative methods for concatenation of core genes indicate a lack of resolution in deep nodes of the prokaryotic phylogeny.

W. Doolittle, E. Susko, J. Leigh, 2007, Molecular biology and evolution.