J. Meller

发表

Computational Methods for Prediction of Protein-Protein Interaction Sites

J. Meller, A. Porollo, 2012 .

Linear programming optimization and a double statistical filter for protein threading protocols

J Meller, R Elber, R. Elber, 2001, Proteins.

Maximum feasibility guideline in the design and analysis of protein folding potentials

Ron Elber, Jaroslaw Meller, Michael Wagner, 2002, J. Comput. Chem..

Maximum Feasibility Approach for Consensus Classifiers : Applications to Protein Structure Prediction

Aleksey A. Porollo, Jaroslaw Meller, Michael Wagner, 2004 .

On the transferability of folding and threading potentials and sequence-independent filters for protein folding simulations

R. Adamczak, J. Meller, 2004 .

Advances in Protein Structure Prediction: Algorithms and Applications

J. Meller, 2022 .

Protein Recognition by Sequence‐to‐Structure Fitness: Bridging Efficiency and Capacity of Threading Models

R. Elber, J. Meller, 2002 .

Leveraging Food and Drug Administration Adverse Event Reports for the Automated Monitoring of Electronic Health Records in a Pediatric Hospital

I. Solti, Yizhao Ni, T. Lingren, 2017, Biomedical informatics insights.

Enhanced prediction of conformational flexibility and phosphorylation in proteins.

Aleksey A. Porollo, R. Adamczak, J. Meller, 2010, Advances in experimental medicine and biology.

Computer simulations of carbon monoxide photodissociation in myoglobin: structural interpretation of the B states.

R. Elber, J. Meller, Jaroslaw Meller, 1998, Biophysical journal.

Deuterium isotope effects on hydrophobic interactions: the importance of dispersion interactions in the hydrophobic phase.

Jaroslaw Meller, Nobuo Tanaka, J. Meller, 2003, Journal of the American Chemical Society.

SGA DERIVATION OF MATRIX ELEMENTS BETWEEN SPIN-ADAPTED PERTURBATIVE WAVE FUNCTIONS

Wlodzislaw Duch, J. Meller, 1999 .

Size-consistent multireference configuration interaction method through the dressing of the norm of determinants

J. Malrieu, J. Meller, J. Heully, 2003 .

A central domain of cyclin D1 mediates nuclear receptor corepressor activity

J. Meller, K. Knudsen, J. Diehl, 2005, Oncogene.

Cyclin D3 action in androgen receptor regulation and prostate cancer

J. Meller, Y. Wang, K. Knudsen, 2008, Oncogene.

Rhesus rotavirus receptor‐binding site affects high mobility group box 1 release, altering the pathogenesis of experimental biliary atresia

J. Meller, G. Tiao, H. Poling, 2022, Hepatology communications.

SYNTHESES WITH ORGANOBORANES. VII. MONOHYDROBORATION OF CONJUGATED DIENES WITH CATECHOLBORANE CATALYZED BY COMPLEXES OF NICKEL(II) CHLORIDE AND COBALT (II) CHLORIDE WITH DIPHOSPHINES

J. Meller, M. Zaidlewicz, 1997 .

Syntheses with Organoboranes. X. Monohydroboration of Conjugated Enynes with Catecholborane Catalyzed by Nickel(II) Chloride Complexes with Diphosphines

J. Meller, M. Zaidlewicz, 1999 .

Canonical Bcl-2 Motifs of the Na+/K+ Pump Revealed by the BH3 Mimetic Chelerythrine: Early Signal Transducers of Apoptosis?

J. Meller, G. Alter, T. L. Brown, 2013, Cellular Physiology and Biochemistry.

Analysis of current antifungal agents and their targets within the Pneumocystis carinii genome.

J. Meller, A. Porollo, M. Cushion, 2012, Current drug targets.

Electronic excitation spectra of furan and pyrrole: Revisited by the symmetry adapted cluster–configuration interaction method

H. Nakatsuji, M. Ehara, J. Meller, 2000 .

Enhanced recognition of protein transmembrane domains with prediction-based structural profiles

Aleksey A. Porollo, Jaroslaw Meller, Mark Jarrell, 2006, Bioinform..

Cinteny: flexible analysis and visualization of synteny and genome rearrangements in multiple organisms

Amit U. Sinha, Jaroslaw Meller, J. Meller, 2007, BMC Bioinformatics.

The Library of Integrated Network-Based Cellular Signatures NIH Program: System-Level Cataloging of Human Cells Response to Perturbations.

Ravi Iyengar, Vasileios Stathias, Amar Koleti, 2017, Cell systems.

Interaction between Na-K-ATPase and Bcl-2 proteins BclXL and Bak.

J. Meller, P. Lauf, N. Adragna, 2015, American journal of physiology. Cell physiology.

Pharmacological impacts on schizophrenia functional analysis: a postmortem proteome study

J. Meller, A. Funk, R. Mccullumsmith, 2021 .

Sensitivity Analysis for Reversal Distance and Breakpoint Reuse in Genome Rearrangements

Amit U. Sinha, Jaroslaw Meller, J. Meller, 2007, Pacific Symposium on Biocomputing.

Accurate prediction of solvent accessibility using neural networks–based regression

Aleksey A. Porollo, Aleksey Porollo, Jarosław Meller, 2004, Proteins.

Rhesus rotavirus VP4 sequence-specific activation of mononuclear cells is associated with cholangiopathy in murine biliary atresia.

J. Meller, G. Tiao, S. Mohanty, 2015, American journal of physiology. Gastrointestinal and liver physiology.

Secretory phospholipase A2-IIa upregulates HER/HER2-elicited signaling in lung cancer cells

P. Succop, J. Meller, K. Wikenheiser-Brokamp, 2014, International journal of oncology.

Expression profiles during dedifferentiation in newt lens regeneration revealed by expressed sequence tags

Kiyokazu Agata, Jaroslaw Meller, Panagiotis A. Tsonis, 2010, Molecular vision.

A Point Mutation in the Rhesus Rotavirus VP4 Protein Generated through a Rotavirus Reverse Genetics System Attenuates Biliary Atresia in the Murine Model

J. Meller, G. Tiao, S. Mohanty, 2017, Journal of Virology.

The SRL peptide of rhesus rotavirus VP4 protein governs cholangiocyte infection and the murine model of biliary atresia

J. Meller, G. Tiao, S. Mohanty, 2017, Hepatology.

POLYVIEW-MM: web-based platform for animation and analysis of molecular simulations

Aleksey A. Porollo, Jaroslaw Meller, J. Meller, 2010, Nucleic Acids Res..

Versatile annotation and publication quality visualization of protein complexes using POLYVIEW-3D

Aleksey A. Porollo, Jaroslaw Meller, J. Meller, 2007, BMC Bioinformatics.

Transcriptome of Pneumocystis carinii during Fulminate Infection: Carbohydrate Metabolism and the Concept of a Compatible Parasite

J. Arnold, R. Adamczak, J. Meller, 2007, PloS one.

Genomics Portals: integrative web-platform for mining genomics data

Mario Medvedovic, Jing Chen, Jaroslaw Meller, 2010, BMC Genomics.

Prediction‐based fingerprints of protein–protein interactions

Aleksey A. Porollo, Aleksey Porollo, Jarosław Meller, 2006, Proteins.

Draft Assembly and Annotation of the Pneumocystis carinii Genome

Aleksey A. Porollo, J. Meller, A. Porollo, 2006, The Journal of eukaryotic microbiology.

Combining prediction of secondary structure and solvent accessibility in proteins

Aleksey A. Porollo, Aleksey Porollo, Jarosław Meller, 2005, Proteins.

POLYVIEW: a flexible visualization tool for structural and functional annotations of proteins

Aleksey A. Porollo, Jaroslaw Meller, Rafal Adamczak, 2004, Bioinform..

Building and assessing atomic models of proteins from structural templates: Learning and benchmarks

Ron Elber, Jaroslaw Meller, Brinda Kizhakke Vallat, 2009, Proteins.

Linear Regression Models for Solvent Accessibility Prediction in Proteins

Aleksey A. Porollo, Jaroslaw Meller, Michael Wagner, 2005, J. Comput. Biol..

State‐specific coupled cluster‐type dressing of multireference singles and doubles configuration interaction matrix

J. Malrieu, J. Meller, R. Caballol, 1996 .

Multireference self-consistent size-consistent configuration interaction method. A few applications to ground and excited states

J. Malrieu, J. Meller, J. Heully, 1995 .

On multireference superdirect configuration interaction in third order

Wlodzislaw Duch, J. Meller, 1994 .

Computational Approach to Understanding Autism Spectrum Disorders

Wieslaw Nowak, Wlodzislaw Duch, Grzegorz M. Wójcik, 2012 .

A general bridge between configuration interaction and coupled-cluster methods: a multistate solution

L. Adamowicz, J. Malrieu, J. Meller, 1996 .

Size-consistent self-consistent combination of selected CI and perturbation theory

J. Malrieu, J. Meller, J. Heully, 1994 .

Interaction between Na/K ATPase and

J. Meller, P. Lauf, N. Adragna, 2014 .

KRSA: An R package and R Shiny web application for an end-to-end upstream kinase analysis of kinome array data

J. Meller, Erica A. K. DePasquale, R. Mccullumsmith, 2021, PloS one.

Artificial intelligence approaches for rational drug design and discovery.

Włodzisław Duch, Karthikeyan Swaminathan, Jarosław Meller, 2007, Current pharmaceutical design.

Exposure to traffic-related air pollution and bacterial diversity in the lower respiratory tract of children

T. Reponen, A. Adhikari, J. Meller, 2021, PloS one.

Comprehensive analysis of sequences of a protein switch

Ron Elber, Jaroslaw Meller, R. Elber, 2016, Protein science : a publication of the Protein Society.

On setting up and assessing docking simulations for virtual screening.

Aleksey A. Porollo, Jaroslaw Meller, Aleksey Porollo, 2012, Methods in molecular biology.

UQlust: combining profile hashing with linear-time ranking for efficient clustering and analysis of big macromolecular data

R. Adamczak, J. Meller, 2016, BMC Bioinformatics.

In Silico Sequence Analysis and Homology Modeling of Dihydropteroate Synthase in Pneumocystis Pneumonia

Miller, C. Beard, J. Stringer, 2015 .

Stochastic path approach to compute atomically detailed trajectories: Application to the folding of C peptide

Ron Elber, Jaroslaw Meller, Roberto Olender, 1999 .

Large-scale linear programming techniques for the design of protein folding potentials

Ron Elber, Jaroslaw Meller, Michael Wagner, 2004, Math. Program..

fw2.2: a quantitative trait locus key to the evolution of tomato fruit size.

T. C. Nesbitt, R. Elber, S. Tanksley, 2000, Science.

Large‐Scale Characterization of Introns in the Pneumocystis carinii Genome

J. Meller, A. Porollo, M. Cushion, 2006, The Journal of eukaryotic microbiology.

Temperatures in linguistics as a model of thermodynamics

Jaroslaw Meller, Roman S. Ingarden, R. Ingarden, 1994 .

Enhanced recognition of protein transmembrane domains with prediction-based structural profiles

R. Adamczak, J. Meller, A. Porollo, 2006, Bioinform..

Solvent and lipid accessibility prediction as a basis for model quality assessment in soluble and membrane proteins.

Mukta Phatak, Michael Wagner, Baoqiang Cao, 2011, Current protein & peptide science.

Fast Geometric Consensus Approach for Protein Model Quality Assessment

Jaroslaw Meller, Jaroslaw Pillardy, Rafal Adamczak, 2011, J. Comput. Biol..

Expression profiles during dedifferentiation in newt lens regeneration revealed by expressed sequence tags

J. Meller, P. Tsonis, K. Agata, 2010, Molecular vision.

Electronic excitation spectra of furan and pyrrole: Revisited by the symmetry adapted cluster–configuration interaction method

H. Nakatsuji, M. Ehara, J. Meller, 2000 .

Enhanced recognition of protein transmembrane domains with prediction-based structural profiles

Aleksey A. Porollo, R. Adamczak, J. Meller, 2006, Bioinform..

Interaction between Na-K-ATPase and Bcl-2 proteins BclXL and Bak.

J. Meller, P. Lauf, N. Adragna, 2015, American journal of physiology. Cell physiology.