Dong Wang

发表

RNALocate: a resource for RNA subcellular localizations

Yan Huang, Lin Zhang, Ting Zhang, 2016, Nucleic Acids Res..

RAID: a comprehensive resource for human RNA-associated (RNA–RNA/RNA–protein) interaction

Xia Li, Kongning Li, Jianzhen Xu, 2014, RNA.

A functional module-based exploration between inflammation and cancer in esophagus

Hong Wang, Chunhua Li, Kongning Li, 2015, Scientific Reports.

A Brief Review of RNA–Protein Interaction Database Resources

Yue Zhao, Dong Wang, Ying Yi, 2017, Non-coding RNA.

Network-based survival-associated module biomarker and its crosstalk with cell death genes in ovarian cancer

Xia Li, Liqiang Wang, Kongning Li, 2015, Scientific Reports.

Guidelines for the use and interpretation of assays formonitoring autophagy (3rd edition)

Sangeeta Khare, Xin Qi, Ying Wang, 2016 .

Connect the dots

Jianzhen Xu, Yongfei Hu, Dong Wang, 2013, Autophagy.

protein ) interaction − RNA / RNA − RAID : a comprehensive resource for human RNA-associated ( RNA

Kongning Li, Jianzhen Xu, Wulan Deng, 2014 .

ncRDeathDB: A comprehensive bioinformatics resource for deciphering network organization of the ncRNA-mediated cell death system

Xia Li, Kongning Li, Jianzhen Xu, 2015, Autophagy.

RNAInter in 2020: RNA interactome repository with increased coverage and annotation

Jia Yu, Yan Huang, Dong Wang, 2019, Nucleic Acids Res..

Exploration of invasive mechanisms via global ncRNA-associated virus-host crosstalk.

Yongfei Hu, Dong Wang, Yan Wang, 2020, Genomics.

Global gene expression distribution in non-cancerous complex diseases.

X. Chen, Yun Xiao, Kongning Li, 2014, Molecular bioSystems.

Deciphering global signal features of high-throughput array data from cancers.

B. Li, Kongning Li, Zheng Guo, 2014, Molecular bioSystems.

Integrated Analysis of Brain Transcriptome Reveals Convergent Molecular Pathways in Autism Spectrum Disorder

Y. Huang, Dong Wang, Xiaodan Li, 2019, Front. Psychiatry.

Revealing potential molecular targets bridging colitis and colorectal cancer based on multidimensional integration strategy

Yongfei Hu, Huihui Fan, Dong Wang, 2015, Oncotarget.

Identifying Genomic Variations in Monozygotic Twins Discordant for Autism Spectrum Disorder Using Whole-Genome Sequencing

Yue Zhao, Dong Wang, Ying Yi, 2018, Molecular therapy. Nucleic acids.

Guidelines for the use and interpretation of assays for monitoring autophagy (4th edition)1

Mark R. Marten, Erinna F. Lee, Dana L. Miller, 2021, Autophagy.

Artificial intelligence and its applications in digital hematopathology

Yan Huang, Yongfei Hu, Dong Wang, 2022, Blood science.

Engineered Cas12a-Plus nuclease enables gene editing with enhanced activity and specificity

Yongfei Hu, Dong Wang, Yuchen Liu, 2022, BMC biology.

DM3Loc: multi-label mRNA subcellular localization prediction and analysis based on multi-head self-attention mechanism

Dong Xu, Hao Lin, Dong Wang, 2021, Nucleic acids research.

MNDR v2.0: an updated resource of ncRNA–disease associations in mammals

Yue Zhao, Yan Huang, Lin Zhang, 2017, Nucleic Acids Res..

MNDR v3.0: mammal ncRNA–disease repository with increased coverage and annotation

Dong Wang, Lin Ning, Tianyu Cui, 2020, Nucleic Acids Res..

Single-cell RNA-seq reveals fibroblast heterogeneity and increased mesenchymal fibroblasts in human fibrotic skin diseases

Yongfei Hu, Dong Wang, Bin Yang, 2021, Nature Communications.

MiniCAFE, a CRISPR/Cas9-based compact and potent transcriptional activator, elicits gene expression in vivo

Yongfei Hu, Dong Wang, Zhenhua Luo, 2021, Nucleic acids research.

RNAInter v4.0: RNA interactome repository with redefined confidence scoring system and improved accessibility

Yongfei Hu, Puwen Tan, Yan Huang, 2021, Nucleic Acids Res..

Bioinformatics Technologies in Autophagy Research.

Dong Wang, Di Peng, Yu Xue, 2021, Advances in experimental medicine and biology.

CellCall: integrating paired ligand–receptor and transcription factor activities for cell–cell communication

Puwen Tan, Yan Huang, Dong Wang, 2021, Nucleic acids research.

Cellinker: a platform of ligand-receptor interactions for intercellular communication analysis

Dong Wang, Le Li, Tianyuan Liu, 2021, Bioinform..

hnRNPLL controls pluripotency exit of embryonic stem cells by modulating alternative splicing of Tbx3 and Bptf

Yongfei Hu, Puwen Tan, Dong Wang, 2020, The EMBO journal.

Tag-seq: a convenient and scalable method for genome-wide specificity assessment of CRISPR/Cas nucleases

Yongfei Hu, Dong Wang, Jiajian Zhou, 2021, Communications Biology.

Enhancing site-specific DNA integration by a Cas9 nuclease fused with a DNA donor-binding domain

Yongfei Hu, Dong Wang, Chengfang Liu, 2020, Nucleic acids research.

Single-cell RNA sequencing highlights transcription activity of autophagy-related genes during hematopoietic stem cell formation in mouse embryos

Yongfei Hu, Dong Wang, Ying Yi, 2017, Autophagy.

RNADisease v4.0: an updated resource of RNA-associated diseases, providing RNA-disease analysis, enrichment and prediction

Yongfei Hu, Yan Huang, Dong Wang, 2022, Nucleic Acids Res..

cncRNAdb: a manually curated resource of experimentally supported RNAs with both protein-coding and noncoding function

Weiyi Li, Jing Wang, Dong Wang, 2020, Nucleic Acids Res..

ViRBase: a resource for virus–host ncRNA-associated interactions

Kwong-Sak Leung, Hao Wu, Ting Zhang, 2014, Nucleic Acids Res..

Transcriptomic insights into temporal expression pattern of autophagy genes during monocytic and granulocytic differentiation

Yongfei Hu, Puwen Tan, Dong Wang, 2018, Autophagy.

microRNA arm-imbalance in part from complementary targets mediated decay promotes gastric cancer progression

Ting Zhang, Dong Wang, Fang Wang, 2019, Nature Communications.

RNALocate v2.0: an updated resource for RNA subcellular localization with increased coverage and annotation

Puwen Tan, Yan Huang, Hao Lin, 2021, Nucleic Acids Res..

Upregulation of microRNA-18b induces phosphatase and tensin homolog to accelerate the migration and invasion abilities of ovarian cancer.

Dong Wang, Ai-ming Wang, Xiaofan Han, 2017, Oncology letters.

LncReader: identification of dual functional long noncoding RNAs using a multi-head self-attention mechanism

Yongfei Hu, Puwen Tan, Yan Huang, 2022, Briefings Bioinform..

Single-cell architecture and functional requirement of alternative splicing during hematopoietic stem cell formation

B. Liu, Yongfei Hu, Fang Wang, 2022, Science advances.

RNAPhaSep: a resource of RNAs undergoing phase separation

Dong Wang, Xiaopei Shen, Xin Wu, 2021, Nucleic Acids Res..

Erratum to: Guidelines for the use and interpretation of assays for monitoring autophagy (3rd edition) (Autophagy, 12, 1, 1-222, 10.1080/15548627.2015.1100356

Sara W. Bird, Erinna F. Lee, Michael D. Kim, 2016 .

ViRBase v3.0: a virus and host ncRNA-associated interaction repository with increased coverage and annotation

Yanhui Li, Yan Huang, Dong Wang, 2021, Nucleic Acids Res..

Editorial :Guidelines for the use and interpretation of assays for monitoring autophagy (3rd edition). DOI: 10.1080/15548627.2015.1100356;WOS:000373595400001; 2-s2.0-85013763791&;PMID: 26799652

Lee, Duchen, Izzo, 2016 .

RAID v2.0: an updated resource of RNA-associated interactions across organisms

Yue Zhao, Ping Hou, Yan Huang, 2016, Nucleic Acids Res..

RIscoper: a tool for RNA-RNA interaction extraction from the literature

Dong Wang, Hao Xu, Yang Zhang, 2019, Bioinform..

SynBioLGDB: a resource for experimentally validated logic gates in synthetic biology

Xia Li, Hao Wu, Changliang Wang, 2015, Scientific Reports.