Darby Tien-Hao Chang

发表

Using a kernel density estimation based classifier to predict species-specific microRNA precursors

Darby Tien-Hao Chang, Chih-Ching Wang, Jian-Wei Chen, 2008, BMC Bioinformatics.

Predicting the protein-protein interactions using primary structures with predicted protein surface

Darby Tien-Hao Chang, Yu-Tang Syu, Po-Chang Lin, 2010, BMC Bioinformatics.

Prediction of protein secondary structures with a novel kernel density estimation based classifier

Yen-Jen Oyang, Yu-Yen Ou, Hao-Geng Hung, 2008, BMC Research Notes.

Studying disorder-to-order transitions from structural analysis

Darby Tien-Hao Chang, Chih-Yun Chiang, Fung-Wei Lin, 2011, 2011 IEEE 1st International Conference on Computational Advances in Bio and Medical Sciences (ICCABS).

Light-RCV: a lightweight read coverage viewer for next generation sequencing data

Che-Wei Chang, Darby Tien-Hao Chang, Wen-Bin Lee, 2015, BMC Bioinformatics.

YPA: an integrated repository of promoter features in Saccharomyces cerevisiae

Darby Tien-Hao Chang, Wei-Sheng Wu, Cheng-Yi Huang, 2010, Nucleic Acids Res..

CCProf: exploring conformational change profile of proteins

Darby Tien-Hao Chang, Che-Wei Chang, Chai-Wei Chou, 2016, Database J. Biol. Databases Curation.

A study on promoter characteristics of head-to-head genes in Saccharomyces cerevisiae

Darby Tien-Hao Chang, Chen-Yu Fan, Chi-Yeh Wu, 2012, BMC Genomics.

E1DS: catalytic site prediction based on 1D signatures of concurrent conservation

Darby Tien-Hao Chang, Chien-Yu Chen, Ting-Ying Chien, 2008, Nucleic Acids Res..

Darby Tien-Hao Chang, Ming-Liang Wei, Wei-Sheng Wu, 2014, BMC Systems Biology.

Predicting protein-protein interactions in unbalanced data using the primary structure of proteins

Darby Tien-Hao Chang, Chi-Yuan Yu, Lih-Ching Chou, 2010, BMC Bioinformatics.

Data classification with a generalized Gaussian components based density estimation algorithm

Yen-Jen Oyang, Darby Tien-Hao Chang, Chih-Hung Hsieh, 2009, 2009 International Joint Conference on Neural Networks.

Expediting protein structural analysis with an efficient kernel density estimation algorithm

Yen-Jen Oyang, Darby Tien-Hao Chang, Chien-Yu Chen, 2003, Fifth International Symposium on Multimedia Software Engineering, 2003. Proceedings..

AH-DB: collecting protein structure pairs before and after binding

Darby Tien-Hao Chang, Chih-Yun Chiang, Chen-Yu Fan, 2011, Nucleic Acids Res..

An automatic method to calculate heart rate from zebrafish larval cardiac videos

Darby Tien-Hao Chang, Chia-Pin Kang, Hung-Chi Tu, 2018, BMC Bioinformatics.

Predicting cis-regulatory modules by method integration

Darby Tien-Hao Chang, Guan-Yu Shiu, You-Jie Sun, 2014, 11th IEEE International Conference on Control & Automation (ICCA).

DBD2BS: connecting a DNA-binding protein with its binding sites

Darby Tien-Hao Chang, Chien-Yu Chen, Ting-Ying Chien, 2012, Nucleic Acids Res..

Prediction of Protein Secondary Structures with a Novel Kernel Density Estimator

Yen-Jen Oyang, Yu-Yen Ou, Hao-Geng Hung, 2007, MLMTA.

ProteMiner-SSM: a web server for efficient analysis of similar protein tertiary substructures

Yen-Jen Oyang, Darby Tien-Hao Chang, Hsuan-Cheng Huang, 2004, Nucleic Acids Res..

AutoBind: automatic extraction of protein-ligand-binding affinity data from biological literature

Jung-Hsien Chiang, Jung-Hsin Lin, Darby Tien-Hao Chang, 2012, Bioinform..

CoopTFD: a repository for predicted yeast cooperative transcription factor pairs

Darby Tien-Hao Chang, Wei-Sheng Wu, Fu-Jou Lai, 2016, Database J. Biol. Databases Curation.

seeMotif: exploring and visualizing sequence motifs in 3D structures

Darby Tien-Hao Chang, Chien-Yu Chen, Ting-Ying Chien, 2009, Nucleic Acids Res..

An efficient mechanism for prediction of protein-ligand interactions based on analysis of protein tertiary substructures

Yen-Jen Oyang, Darby Tien-Hao Chang, Hsuan-Cheng Huang, 2004, Proceedings. Fourth IEEE Symposium on Bioinformatics and Bioengineering.

MEDock: a web server for efficient prediction of ligand binding sites based on a novel optimization algorithm

Yen-Jen Oyang, Jung-Hsin Lin, Darby Tien-Hao Chang, 2005, Nucleic Acids Res..

SigUNet: signal peptide recognition based on semantic segmentation

Darby Tien-Hao Chang, Jhe-Ming Wu, Yu-Chen Liu, 2019, BMC Bioinformatics.

Real value prediction of protein solvent accessibility using enhanced PSSM features

Darby Tien-Hao Chang, Yu-Tang Syu, Chih-Peng Wu, 2008, BMC Bioinformatics.

On the Design of Optimization Algorithms for Prediction of Molecular Interactions

Yen-Jen Oyang, Jung-Hsin Lin, Darby Tien-Hao Chang, 2009, 2009 Ninth IEEE International Conference on Bioinformatics and BioEngineering.

A study on the flexibility of enzyme active sites

Darby Tien-Hao Chang, Yu-Feng Huang, Chih-Wei Lin, 2011, BMC Bioinformatics.

Predicting microRNA precursors with a generalized Gaussian components based density estimation algorithm

Yen-Jen Oyang, Darby Tien-Hao Chang, Chih-Hung Hsieh, 2010, BMC Bioinformatics.

Protemot: prediction of protein binding sites with automatically extracted geometrical templates

Yen-Jen Oyang, Jung-Hsin Lin, Darby Tien-Hao Chang, 2006, Nucleic Acids Res..

Supervised Machine Learning with a Novel Kernel Density Estimator

Darby Tien-Hao Chang, Chien-Yu Chen, Y. Oyang, 2007, 0709.2760.

Predicting Target DNA Sequences of DNA-Binding Proteins Based on Unbound Structures

Darby Tien-Hao Chang, Chien-Yu Chen, Yi-Zhong Weng, 2012, PloS one.

An Integrated Predictor for Cis-Regulatory Modules

Darby Tien-Hao Chang, G. Shiu, You-Jie Sun, 2013 .

Combining Phylogenetic Profiling-Based and Machine Learning-Based Techniques to Predict Functional Related Proteins

Darby Tien-Hao Chang, Tzu-Wen Lin, Jian-Wei Wu, 2013, PloS one.

YGA: identifying distinct biological features between yeast gene sets.

Darby Tien-Hao Chang, Yi-Han Bai, Wei-Sheng Wu, 2013, Gene.

PRASA: an integrated web server that analyzes protein interaction types.

Darby Tien-Hao Chang, Chen-Yu Fan, Yi-Han Bai, 2013, Gene.

Supervised Machine Learning with a Novel Kernel Density Estimator

Darby Tien-Hao Chang, Chien-Yu Chen, Y. Oyang, 2007, 0709.2760.

BIOINFORMATICS AutoBind: automatic extraction of protein–ligand-binding afﬁnity data from biological literature

Darby Tien-Hao Chang, J. Chiang, Jung-Hsin Lin, 2012 .

SIMGraph: Simplifying Contig Graph to Improve de Novo Genome Assembly Using Next-generation Sequencing Data

Darby Tien-Hao Chang, Tsunglin Liu, Chun-Hui Yu, 2012 .

Introducing Sequence-Order Constraint into Prediction of Protein Binding Sites with Automatically Extracted Templates

Darby Tien-Hao Chang, Yu-Feng Huang, Chien-Kang Huang, 2009 .

An automatic method to calculate heart rate from zebrafish larval cardiac videos

Darby Tien-Hao Chang, Hung-Chi Tu, T. Fu, 2018, BMC Bioinformatics.