C. Fan

发表

The B73 Maize Genome: Complexity, Diversity, and Dynamics

Dawn H. Nagel, Kevin L. Schneider, Thomas K. Wolfgruber, 2009, Science.

Evolutionary Fates and Dynamic Functionalization of Young Duplicate Genes in Arabidopsis Genomes1[OPEN]

Jun Wang, C. Fan, F. Tao, 2016, Plant Physiology.

High Occurrence of Functional New Chimeric Genes in Survey of Rice Chromosome 3 Short Arm Genome Sequences

M. Long, R. Wing, Jun Wang, 2013, Genome biology and evolution.

Recombination yet inefficient selection along the Drosophila melanogaster subgroup's fourth chromosome.

M. Long, H. Innan, C. Fan, 2010, Molecular biology and evolution.

Spatio-temporal patterns of genome evolution in allotetraploid species of the genus Oryza.

J. Bennetzen, K. Cranston, S. Jackson, 2010, The Plant journal : for cell and molecular biology.

Genomes of 13 domesticated and wild rice relatives highlight genetic conservation, turnover and innovation across the genus Oryza

Kenneth L. McNally, Luis F. Rivera, M. Sanderson, 2018, Nature Genetics.

A Microarray Based Genomic Hybridization Method for Identification of New Genes in Plants: Case Analyses of Arabidopsis and Oryza

Maria D. Vibranovski, Manyuan Long, Chuanzhu Fan, 2007 .

The genome sequence of African rice (Oryza glaberrima) and evidence for independent domestication

Georg Haberer, Andrea Zuccolo, Rod A Wing, 2014, Nature Genetics.

RiTE database: a resource database for genus-wide rice genomics and evolutionary biology

S. Jackson, Wen Wang, R. Wing, 2015, BMC Genomics.

Plant hormonal changes and differential expression profiling reveal seed dormancy removal process in double dormant plant-herbaceous peony

C. Fan, Xueting Li, R. Fei, 2020, PloS one.

Characterization of the glycerol-3-phosphate acyltransferase gene and its real-time expression under cold stress in Paeonia lactiflora Pall

Pan-pan Yang, C. Fan, Xueting Li, 2018, PloS one.

Genome-wide methylation analyses of human sperm unravel novel differentially methylated regions in asthenozoospermia.

C. Fan, Jianhai Chen, Jinyan Xu, 2022, Epigenomics.

The nanopore sequencing of a Chinese rhesus macaque revealed patterns of methylation, recombination, and selection for structural variations

Hao Yang, C. Fan, I. Jakovlić, 2022, bioRxiv.

The Oryza Map Alignment Project

L. Stein, S. Jackson, W. McCombie, 2008 .

Optimization and application of non-native Phragmites australis transcriptome assemblies

C. Fan, K. Kowalski, E. Golenberg, 2023, PloS one.

High Rate of Chimeric Gene Origination by Retroposition in Plant Genomes[W]

Jun Wang, Søren Vang, Dongyuan Liu, 2006, The Plant Cell Online.

Phylogenetic Analyses Identify 10 Classes of the Protein Disulfide Isomerase Family in Plants, Including Single-Domain Protein Disulfide Isomerase-Related Proteins1[w]

R. Jung, C. Fan, R. Boston, 2005, Plant Physiology.

Divergent Evolutionary and Expression Patterns between Lineage Specific New Duplicate Genes and Their Parental Paralogs in Arabidopsis thaliana

Jun Wang, C. Fan, N. Marowsky, 2013, PloS one.

Heterogeneous evolution of the Myc-like Anthocyanin regulatory gene and its phylogenetic utility in Cornus L. (Cornaceae).

M. Purugganan, C. Fan, B. Wiegmann, 2004, Molecular phylogenetics and evolution.

DNA methylation changes facilitated evolution of genes derived from Mutator-like transposable elements

R. Wing, Yeisoo Yu, D. Kudrna, 2016, Genome Biology.

Divergence of Gene Body DNA Methylation and Evolution of Plant Duplicate Genes

Jun Wang, C. Fan, N. Marowsky, 2014, PloS one.

Rapid Genome Evolution and Adaptation of Thlaspi arvense Mediated by Recurrent RNA-Based and Tandem Gene Duplications

C. Fan, Xiaopei Wu, Daping Gui, 2022, Frontiers in Plant Science.

PHYLOGENY, BIOGEOGRAPHY, AND MOLECULAR DATING OF CORNELIAN CHERRIES (CORNUS, CORNACEAE): TRACKING TERTIARY PLANT MIGRATION

C. Fan, Q. Xiang, S. Manchester, 2005, Evolution; international journal of organic evolution.

The subtelomere of Oryza sativa chromosome 3 short arm as a hot bed of new gene origination in rice.

M. Long, R. Wing, Yeisoo Yu, 2008, Molecular plant.

Recurrent tandem gene duplication gave rise to functionally divergent genes in Drosophila.

M. Long, C. Fan, Ying Chen, 2008, Molecular biology and evolution.

Origination of chimeric genes through DNA-level recombination.

M. Long, C. Fan, W. Wang, 2007, Genome dynamics.

A New Retroposed Gene in Drosophila Heterochromatin Detected by Microarray-Based Comparative Genomic Hybridization

M. Long, C. Fan, Chuanzhu Fan, 2007, Journal of Molecular Evolution.

Conservation and Purifying Selection of Transcribed Genes Located in a Rice Centromere[W]

R. Wing, Jiming Jiang, Jianwei Zhang, 2011, Plant Cell.

Dynamic Evolution of Oryza Genomes Is Revealed by Comparative Genomic Analysis of a Genus-Wide Vertical Data Set[W][OA]

J. Bennetzen, S. Jackson, R. Wing, 2008, The Plant Cell Online.

A Neutrality Test for Detecting Selection on DNA Methylation Using Single Methylation Polymorphism Frequency Spectrum

Jun Wang, C. Fan, Chuanzhu Fan, 2014, Genome biology and evolution.

Evolutionary patterns in the antR-Cor gene in the dwarf dogwood complex (Cornus, Cornaceae)

M. Purugganan, C. Fan, B. Wiegmann, 2007, Genetica.

Phylogenetic analyses of Cornales based on 26S rRNA and combined 26S rDNA-MATK-RBCL sequence data.

C. Fan, Q. Xiang, Chuanzhu Fan, 2003, American journal of botany.

Species-specific partial gene duplication in Arabidopsis thaliana evolved novel phenotypic effects on morphological traits under strong positive selection

M. Long, Y. Ouyang, J. Bergelson, 2021, bioRxiv.

CORNUS (CORNACEAE) BASED ON 26S RDNA SEQUENCES1

C. Fan, Q. Xiang, 2001 .

A lineage-specific centromere retrotransposon in Oryza brachyantha.

S. Jackson, R. Wing, Yeisoo Yu, 2009, The Plant journal : for cell and molecular biology.

Phylogenomic Analysis and Dynamic Evolution of Chloroplast Genomes in Salicaceae

Jun Wang, C. Fan, Yongping Yang, 2017, Front. Plant Sci..