A. Andreeva

发表

Core domain interactions in full-length p53 in solution

Antonina Andreeva, Alan R. Fersht, Dmitry B. Veprintsev, 2006, Proceedings of the National Academy of Sciences of the United States of America.

Biophysical characterizations of human mitochondrial transcription factor A and its binding to tumor suppressor p53

A. Fersht, S. Freund, T. Rutherford, 2009, Nucleic acids research.

The SCOP database in 2020: expanded classification of representative family and superfamily domains of known protein structures

J. Gough, A. Murzin, Eugene Kulesha, 2019, Nucleic Acids Res..

Evolution of protein fold in the presence of functional constraints.

A. Murzin, A. Andreeva, 2006, Current opinion in structural biology.

Crystal structures of the CPAP/STIL complex reveal its role in centriole assembly and human microcephaly

K. Oegema, Christopher M Johnson, J. Raff, 2013, eLife.

Revised structure of the AbrB N‐terminal domain unifies a diverse superfamily of putative DNA‐binding proteins

Antonina Andreeva, John Cavanagh, A. Murzin, 2005, FEBS letters.

Lessons from making the Structural Classification of Proteins (SCOP) and their implications for protein structure modelling

A. Andreeva, 2016, Biochemical Society transactions.

Structural Biology and Crystallization Communications Structural Classification of Proteins and Structural Genomics: New Insights into Protein Folding and Evolution

Alexey G. Murzin, Antonina Andreeva, A. Murzin, 2022 .

Solution structure of the U11-48K CHHC zinc-finger domain that specifically binds the 5' splice site of U12-type introns.

A. Fersht, H. Tidow, T. Rutherford, 2009, Structure.

Mechanism of completion of peptidyltransferase centre assembly in eukaryotes

Florian Stengel, S. Freund, A. Andreeva, 2019, eLife.

Direct binding of CEP85 to STIL ensures robust PLK4 activation and efficient centriole assembly

Christopher M Johnson, C. Robinson, L. Pelletier, 2018, Nature Communications.

Genome3D: integrating a collaborative data pipeline to expand the depth and breadth of consensus protein structure annotation

Marcin J. Skwark, Gustavo A. Salazar, Daniel W. A. Buchan, 2019, Nucleic Acids Res..

Disease-Associated Mutations in CEP120 Destabilize the Protein and Impair Ciliogenesis

Christopher M Johnson, F. Gergely, S. Freund, 2018, Cell reports.

Crystal Structure of a Group I Energy Coupling Factor Vitamin Transporter S Component in Complex with Its Cognate Substrate

H. Tidow, A. Andreeva, I. Josts, 2016, Cell chemical biology.

Assessment of the CASP 4 Fold Re ognition

F. S. Domingues, A. Andreeva, M. Wiederstein, 2001 .

A bimodular mechanism of calcium control in eukaryotes

C. Wiuf, P. Nissen, H. Tidow, 2012, Nature.

Data growth and its impact on the SCOP database: new developments

Tim J. P. Hubbard, Steven E. Brenner, Alexey G. Murzin, 2007, Nucleic Acids Res..

The structural basis for catalysis and substrate specificity of a rhomboid protease

Antonina Andreeva, Kutti R Vinothkumar, Matthew Freeman, 2010, The EMBO journal.

La1.825Sr0.175Cu1–xFexOy and YBa2(Cu1–xFex)3Oy for electrodes of electrochemical oxygen sensors

A. Andreeva, S. F. Palguev, V. K. Gilderman, 1992 .

SCOP2 prototype: a new approach to protein structure mining

Alexey G. Murzin, Cyrus Chothia, Antonina Andreeva, 2014, Nucleic Acids Res..

SCOP database in 2004: refinements integrate structure and sequence family data

Tim J. P. Hubbard, Steven E. Brenner, Alexey G. Murzin, 2004, Nucleic Acids Res..

A novel CHHC Zn-finger domain found in spliceosomal proteins and tRNA modifying enzymes

Antonina Andreeva, Henning Tidow, H. Tidow, 2008, Bioinform..

Adaptive evolution of p53 thermodynamic stability.

A. Fersht, A. Andreeva, K. Khoo, 2009, Journal of molecular biology.

Structures of SAS-6 Suggest Its Organization in Centrioles

C. Robinson, D. Veprintsev, Miriana Petrovich, 2011, Science.

Genome3D: a UK collaborative project to annotate genomic sequences with predicted 3D structures based on SCOP and CATH domains

Sameer Velankar, James Smith, Daniel W. A. Buchan, 2012, Nucleic Acids Res..

Tracing the Evolution of the p53 Tetramerization Domain

A. Joerger, A. Andreeva, R. Wilcken, 2014, Structure.

Classification of proteins: available structural space for molecular modeling.

Antonina Andreeva, A. Andreeva, 2012, Methods in molecular biology.

Structural validation and assessment of AlphaFold2 predictions for centrosomal and centriolar proteins and their complexes

A. Andreeva, Mark van Breugel, Ivan Rosa e Silva, 2022, Communications Biology.

The Ciliopathy-Associated Cep104 Protein Interacts with Tubulin and Nek1 Kinase

A. Andreeva, Minmin Yu, Mark van Breugel, 2017, Structure.

Consequences of point mutations in melanoma-associated antigen 4 (MAGE-A4) protein: Insights from structural and biophysical studies

E. Cota, P. Nikolova, P. Barran, 2016, Scientific Reports.

A fortuitous insight into a common mode of RNA recognition by the dsRNA-specific zinc fingers

A. Murzin, A. Andreeva, 2008, Proceedings of the National Academy of Sciences.

Structure-based evaluation of sequence comparison and fold recognition alignment accuracy.

M J Sippl, P Lackner, F S Domingues, 2000, Journal of molecular biology.

Assessment of the CASP4 fold recognition category

M J Sippl, P Lackner, F S Domingues, 2001, Proteins.

Mapping the physical and functional interactions between the tumor suppressors p53 and BRCA2

A. Fersht, T. Rutherford, A. Andreeva, 2010, Proceedings of the National Academy of Sciences.

Solution structure of ASPP2 N-terminal domain (N-ASPP2) reveals a ubiquitin-like fold.

A. Fersht, H. Tidow, T. Rutherford, 2007, Journal of molecular biology.

Interaction between the Transactivation Domain of p53 and PC4 Exemplifies Acidic Activation Domains as Single-stranded DNA Mimics

A. Fersht, S. Freund, A. Andreeva, 2009, The Journal of Biological Chemistry.

Substrate recognition determinants of human eIF2α phosphatases

A. Andreeva, A. Bertolotti, G. Hodgson, 2021, bioRxiv.

Molecular mechanisms underlying the role of the centriolar CEP164-TTBK2 complex in ciliopathies

T. Rutherford, A. Andreeva, D. Neuhaus, 2021, Structure.

Modification of Chitosan and Possibilities of its Application

A. Andreeva, M. Krysteva, E. Naĭdenova, 1995 .

SISYPHUS—structural alignments for proteins with non-trivial relationships

Andreas Prlic, Tim J. P. Hubbard, Alexey G. Murzin, 2006, Nucleic Acids Res..

What is hidden in the darkness? Deep-learning assisted large-scale protein family curation uncovers novel protein families and folds

A. Bateman, T. Schwede, A. Andreeva, 2023, bioRxiv.

Solution structure of the C4 zinc finger domain of HDM2

A. Fersht, M. Bycroft, A. Andreeva, 2006, Protein science : a publication of the Protein Society.

Crystallization of type I chloramphenicol acetyltransferase: an approach based on the concept of ionic strength reducers.

A. Andreeva, M. Kokkinidis, N. M. Glykos, 2000, Acta crystallographica. Section D, Biological crystallography.

Activation of the integrated stress response by inhibitors of its kinases

A. Andreeva, A. Bertolotti, Aleksandra P. Pitera, 2023, Nature communications.

Investigating Protein Structure and Evolution with SCOP2

Cyrus Chothia, Antonina Andreeva, Dave Howorth, 2015, Current protocols in bioinformatics.

Direct binding of CEP85 to STIL ensures robust PLK4 activation and efficient centriole assembly

C. Robinson, L. Pelletier, B. Raught, 2018, Nature Communications.