B. Volkman

发表

Two-state allosteric behavior in a single-domain signaling protein.

D E Wemmer, D. Kern, D. Lipson, 2001, Science.

Structure of a transiently phosphorylated switch in bacterial signal transduction

Brian F. Volkman, Peter Luginbühl, D. Kern, 2000, Nature.

Structure-Based Identification of Novel Ligands Targeting Multiple Sites within a Chemokine-G-Protein-Coupled-Receptor Interface.

Yan Liu, Rongshi Li, M Trent Kemp, 2016, Journal of medicinal chemistry.

Altered Dimer Interface Decreases Stability in an Amyloidogenic Protein*

B. Volkman, M. Ramirez-Alvarado, F. Peterson, 2008, Journal of Biological Chemistry.

Interconversion between two unrelated protein folds in the lymphotactin native state

Brian F. Volkman, Michael A. Kron, B. Volkman, 2008, Proceedings of the National Academy of Sciences.

Cdc42 regulates the Par-6 PDZ domain through an allosteric CRIB-PDZ transition.

B. Volkman, F. Peterson, K. Prehoda, 2004, Molecular cell.

Switchable Membrane Remodeling and Antifungal Defense by Metamorphic Chemokine XCL1

Ernest Y Lee, B. Volkman, G. Wong, 2020, ACS infectious diseases.

Structure-function guided modeling of chemokine-GPCR specificity for the chemokine XCL1 and its receptor XCR1

M. Rosenkilde, B. Volkman, O. Yoshie, 2019, Science Signaling.

Unfolding the Mysteries of Protein Metamorphosis

B. Volkman, Acacia F. Dishman, 2018, ACS chemical biology.

Chapter 3. Lymphotactin structural dynamics.

B. Volkman, F. Peterson, Tina Y. Liu, 2009, Methods in enzymology.

Decoding the chemotactic signal

B. Volkman, Monica A Thomas, Andrew B. Kleist, 2018, Journal of leukocyte biology.

Short peptide fragments derived from HMG-I/Y proteins bind specifically to the minor groove of DNA.

D. Wemmer, B. Volkman, B. Geierstanger, 1994, Biochemistry.

Targeting SDF-1/CXCL12 with a ligand that prevents activation of CXCR4 through structure-based drug design.

B. Volkman, F. Peterson, Christopher T. Veldkamp, 2010, Journal of the American Chemical Society.

A Gate-Latch-Lock Mechanism for Hormone Signaling by Abscisic Acid Receptors

S. Cutler, Jian-Kang Zhu, Yonghong Wang, 2009, Nature.

The dimeric form of CXCL12 binds to atypical chemokine receptor 1

B. Volkman, F. Peterson, A. Rot, 2021, Science Signaling.

Activation of dimeric ABA receptors elicits guard cell closure, ABA-regulated gene expression, and drought tolerance

S. Cutler, E. Nambara, B. Volkman, 2013, Proceedings of the National Academy of Sciences.

Structure of the SCAN domain from the tumor suppressor protein MZF1.

B. Volkman, F. Peterson, Davin R. Jensen, 2006, Journal of molecular biology.

The CD8-Derived Chemokine XCL1/Lymphotactin Is a Conformation-Dependent, Broad-Spectrum Inhibitor of HIV-1

A. Fauci, B. Volkman, P. Lusso, 2013, PLoS pathogens.

Effects of cognate, non-cognate and synthetic CXCR4 and ACKR3 ligands on human lung endothelial cell barrier function

B. Volkman, Jonathan M. Eby, M. Majetschak, 2017, PloS one.

Identification and Characterization of a Glycosaminoglycan Recognition Element of the C Chemokine Lymphotactin*

R. Linhardt, B. Volkman, Fuming Zhang, 2004, Journal of Biological Chemistry.

Investigations on T cell transmigration in a human skin-on-chip (SoC) model.

B. Volkman, A. Getschman, T. Klonisch, 2021, Lab on a chip.

Potent and selective activation of abscisic acid receptors in vivo by mutational stabilization of their agonist-bound conformation

S. Cutler, B. Volkman, F. Peterson, 2011, Proceedings of the National Academy of Sciences.

Design and discovery of metamorphic proteins

B. Volkman, Acacia F. Dishman, 2022, Current opinion in structural biology.

E2‐binding surface on Uba3 β‐grasp domain undergoes a conformational transition

A. Haas, B. Volkman, F. Peterson, 2012, Proteins.

Characterization of heteromeric complexes between chemokine (C-X-C motif) receptor 4 and α1-adrenergic receptors utilizing intermolecular bioluminescence resonance energy transfer assays.

B. Volkman, V. Gaponenko, Xianlong Gao, 2020, Biochemical and biophysical research communications.

Crystal structure of At2g03760, a putative steroid sulfotransferase from Arabidopsis thaliana

G. Phillips, S. Thao, Qin Zhao, 2004, Proteins.

Crystal structure of the protein from gene At3g17210 of Arabidopsis thaliana

G. Phillips, S. Thao, Qin Zhao, 2004, Proteins.

Heterodimer formation of the myeloid zinc finger 1 SCAN domain and association with promyelocytic leukemia nuclear bodies.

B. Volkman, F. Peterson, Paulette L. Hayes, 2008, Leukemia research.

Structural bioinformatics enhances the interpretation of somatic mutations in KDM6A found in human cancers

Michael T. Zimmermann, Brian C. Smith, M. Zimmermann, 2022, Computational and structural biotechnology journal.

Structural and functional insights into core ABA signaling.

S. Cutler, B. Volkman, F. Peterson, 2010, Current opinion in plant biology.

Structural Analysis of a Novel Small Molecule Ligand Bound to the CXCL12 Chemokine

Yan Liu, B. Volkman, Emmanuel W Smith, 2014, Journal of medicinal chemistry.

Structural Insights into Molecular Recognition by Human Chemokine CCL19.

B. Volkman, F. Peterson, Yu Chen, 2022, Biochemistry.

Fragment-based optimization of small molecule CXCL12 inhibitors for antagonizing the CXCL12/CXCR4 interaction.

Yan Liu, B. Volkman, Emmanuel W Smith, 2013, Current topics in medicinal chemistry.

Role of Nucleic Acid and Protein Manipulation Technologies in High-throughput Structural Biology Efforts

S. Thao, Qin Zhao, Todd Kimball, 2003 .

Chemokine Cooperativity Is Caused by Competitive Glycosaminoglycan Binding

T. Handel, B. Volkman, H. Vischer, 2014, The Journal of Immunology.

CCR7 Sulfotyrosine Enhances CCL21 Binding

B. Volkman, R. Payne, A. Getschman, 2017, International journal of molecular sciences.

Differences in Sulfotyrosine Binding amongst CXCR1 and CXCR2 Chemokine Ligands

B. Volkman, A. Getschman, Christopher T. Veldkamp, 2017, International journal of molecular sciences.

Crumbs binding to the Par-6 CRIB-PDZ module is regulated by Cdc42

B. Volkman, F. Peterson, J. Egner, 2017 .

New Insights into Mechanisms and Functions of Chemokine (C-X-C Motif) Receptor 4 Heteromerization in Vascular Smooth Muscle

B. Volkman, V. Gaponenko, N. Tarasova, 2016, International journal of molecular sciences.

What doesn't kill you makes you stranger: Dipeptidyl peptidase-4 (CD26) proteolysis differentially modulates the activity of many peptide hormones and cytokines generating novel cryptic bioactive ligands.

B. Volkman, M. McGee-Lawrence, M. Hamrick, 2019, Pharmacology & therapeutics.

The dependence of chemokine-glycosaminoglycan interactions on chemokine oligomerization.

T. Handel, B. Volkman, C. Salanga, 2015, Glycobiology.

Mutational analysis of CCL20 reveals flexibility of N‐terminal amino acid composition and length

M. Rosenkilde, B. Volkman, A. Getschman, 2018, Journal of leukocyte biology.

Structural Determinants for the Selective Anti-HIV-1 Activity of the All-β Alternative Conformer of XCL1

B. Volkman, P. Lusso, Christina Guzzo, 2015, Journal of Virology.

Conformational selection guides β-arrestin recruitment at a biased G protein–coupled receptor

M. Babu, B. Volkman, F. Peterson, 2022, Science.

X‐ray structure of Arabidopsis At1g77680, 12‐oxophytodienoate reductase isoform 1

Michael J Runnels, G. Phillips, S. Thao, 2005, Proteins.

Identification and functional characterization of arginine vasopressin receptor 1A : atypical chemokine receptor 3 heteromers in vascular smooth muscle

B. Volkman, V. Gaponenko, Amanda M. Nevins, 2018, Open Biology.

Modeling the complete chemokine-receptor interaction.

Benjamin K. Mueller, J. Meiler, B. Volkman, 2019, Methods in cell biology.

Asymmetrical ligand-induced cross-regulation of chemokine (C-X-C motif) receptor 4 by α1-adrenergic receptors at the heteromeric receptor complex

B. Volkman, V. Gaponenko, Xianlong Gao, 2018, Scientific Reports.

Comparative modeling and docking of chemokine-receptor interactions with Rosetta.

Benjamin K. Mueller, J. Meiler, B. Volkman, 2020, Biochemical and biophysical research communications.

CXC chemokine receptor 4 signaling upon co-activation with stromal cell-derived factor-1α and ubiquitin.

B. Volkman, Abhishek Tripathi, M. Majetschak, 2014, Cytokine.

The chemokine X-factor: Structure-function analysis of the CXC motif at CXCR4 and ACKR3

B. Volkman, A. Getschman, F. Peterson, 2020, The Journal of Biological Chemistry.

Age-associated changes in microRNAs affect the differentiation potential of human mesenchymal stem cells: Novel role of miR-29b-1-5p expression.

B. Volkman, M. McGee-Lawrence, M. Hamrick, 2021, Bone.

Rapid biosensor development using plant hormone receptors as reprogrammable scaffolds

Paul J. Steiner, Zachary T Baumer, Timothy A. Whitehead, 2022, Nature biotechnology.

A Requirement for Metamorphic Interconversion in the Antimicrobial Activity of Chemokine XCL1.

B. Volkman, A. Ouellette, Amanda M. Nevins, 2016, Biochemistry.

responsiveness in conscious mice of strain-specific and allergen-induced airway Restrained whole body plethysmography for measure

Rebekah L. Gundry, E. Ingenito, B. Volkman, 2015 .

Selective and Cell-Active PBRM1 Bromodomain Inhibitors Discovered through NMR Fragment Screening.

Brian C. Smith, Michael D. Olp, B. Volkman, 2022, Journal of medicinal chemistry.

Development and Validation of 2D Difference Intensity Analysis for Chemical Library Screening by Protein‐Detected NMR Spectroscopy

Brian C. Smith, Michael D. Olp, Nolan W. Kennedy, 2018, Chembiochem : a European journal of chemical biology.

Structure of the B3 domain from Arabidopsis thaliana protein At1g16640

B. Volkman, F. Peterson, J. K. Waltner, 2005, Protein science : a publication of the Protein Society.

Chemokine CCL28 Is a Potent Therapeutic Agent for Oropharyngeal Candidiasis

B. Volkman, G. Wong, M. Grayson, 2020, Antimicrobial Agents and Chemotherapy.

A new obligate CXCL4–CXCL12 heterodimer for studying chemokine heterodimer activities and mechanisms

B. Volkman, D. Dréau, I. Nesmelova, 2022, Scientific Reports.

Expression platforms for producing eukaryotic proteins: a comparison of E. coli cell-based and wheat germ cell-free synthesis, affinity and solubility tags, and cloning strategies

Z. Zolnai, G. Phillips, Paul G. Blommel, 2015, Journal of Structural and Functional Genomics.

Tyrosine Residues Mediate Fibril Formation in a Dynamic Light Chain Dimer Interface

B. Volkman, M. Ramirez-Alvarado, F. Peterson, 2012, The Journal of Biological Chemistry.

Special Issue: Fold-Switching Proteins

L. Looger, N. Tjandra, Lee‐Ping Wang, 2021 .

Selective Boosting of CCR7-Acting Chemokines; Short Peptides Boost Chemokines with Short Basic Tails, Longer Peptides Boost Chemokines with Long Basic Tails

M. Rosenkilde, B. Volkman, F. Peterson, 2022, International journal of molecular sciences.

Structural features of an extended C-terminal tail modulate function of the chemokine CCL21.

M. Rosenkilde, B. Volkman, F. Peterson, 2020, Biochemistry.

Redox-Dependent Magnetic Alignment of Clostridium pasteurianum Rubredoxin: Measurement of Magnetic Susceptibility Anisotropy and Prediction of Pseudocontact Shift Contributions

Andrew L. Lee, W. M. Westler, J. Markley, 1999 .

Alanine-scanning Mutagenesis of Plasmatocyte Spreading Peptide Identifies Critical Residues for Biological Activity*

B. Volkman, M. Strand, Y. Hayakawa, 2001, The Journal of Biological Chemistry.

Solution structure of At3g28950 from Arabidopsis thaliana

B. Volkman, F. Peterson, N. B. de la Cruz, 2008, Proteins.

Solution structure of a membrane‐anchored ubiquitin‐fold (MUB) protein from Homo sapiens

B. Volkman, F. Peterson, B. Lytle, 2007, Protein science : a publication of the Protein Society.

SOLUTION STRUCTURE OF THE N-TERMINAL RECEIVER DOMAIN OF NTRC

D. Wemmer, S. Kustu, B. Volkman, 1995 .

Biosynthesis of D-alanyl-lipoteichoic acid: the tertiary structure of apo-D-alanyl carrier protein.

B. Volkman, G. Kresheck, F. Neuhaus, 2001, Biochemistry.

The Center for Eukaryotic Structural Genomics

Z. Zolnai, G. Phillips, B. Fox, 2009, Journal of Structural and Functional Genomics.

Production of Recombinant Chemokines and Validation of Refolding.

Scott K. Johnson, B. Volkman, F. Peterson, 2016, Methods in enzymology.

The Extended N-Terminal Domain Confers Atypical Chemokine Receptor Properties to CXCR3-B

B. Janji, B. Volkman, T. Laeremans, 2022, Frontiers in Immunology.

α1‐Adrenergic Receptors Function Within Hetero‐Oligomeric Complexes With Atypical Chemokine Receptor 3 and Chemokine (C‐X‐C motif) Receptor 4 in Vascular Smooth Muscle Cells

B. Volkman, V. Gaponenko, Xianlong Gao, 2017, Journal of the American Heart Association.

Metamorphic Protein Folding Encodes Multiple Anti-Candida Mechanisms in XCL1

B. Volkman, Acacia F. Dishman, A. Huppler, 2021, Pathogens.

Assignment of 1H, 13C, and 15N signals of reduced Clostridium pasteurianum rubredoxin: Oxidation state-dependent changes in chemical shifts and relaxation rates

J. Markley, B. Volkman, A. M. Prantner, 1997, Journal of biomolecular NMR.

Tumor Derived Extracellular Vesicles Drive T Cell Exhaustion in Tumor Microenvironment through Sphingosine Mediated Signaling and Impacting Immunotherapy Outcomes in Ovarian Cancer

Kam Y. J. Zhang, D. Di Vizio, B. Volkman, 2022, Advanced science.

Abscisic Acid Inhibits Type 2C Protein Phosphatases via the PYR/PYL Family of START Proteins

P. McCourt, S. Cutler, N. Provart, 2009, Science.

The solution structure of ZNF593 from Homo sapiens reveals a zinc finger in a predominately unstructured protein

B. Volkman, F. Peterson, Paulette L. Hayes, 2008, Protein science : a publication of the Protein Society.

Structures of two Arabidopsis thaliana major latex proteins represent novel helix‐grip folds

G. Phillips, Kenneth A. Johnson, B. Volkman, 2009, Proteins: Structure, Function, and Bioinformatics.

Oxidation of histidine residues in copper-zinc superoxide dismutase by bicarbonate-stimulated peroxidase and thiol oxidase activities: pulse EPR and NMR studies.

B. Volkman, F. Peterson, B. Kalyanaraman, 2010, Biochemistry.

The monomer–dimer equilibrium of stromal cell‐derived factor‐1 (CXCL 12) is altered by pH, phosphate, sulfate, and heparin

B. Volkman, F. Peterson, Christopher T. Veldkamp, 2005, Protein science : a publication of the Protein Society.

Natural and engineered chemokine (C-X-C motif) receptor 4 agonists prevent acute respiratory distress syndrome after lung ischemia–reperfusion injury and hemorrhage

B. Volkman, Xianlong Gao, M. Majetschak, 2020, Scientific Reports.

The association and aggregation of the metamorphic chemokine lymphotactin with fondaparinux: from nm molecular complexes to μm molecular assemblies.

C. MacPhee, P. Barran, B. Volkman, 2016, Chemical communications.

Recognition of a CXCR4 Sulfotyrosine by the Chemokine Stromal Cell-derived Factor-1α (SDF-1α/CXCL12)

Brian F. Volkman, Thomas P. Sakmar, Christoph Seibert, 2006 .

Recognition of a CXCR4 sulfotyrosine by the chemokine stromal cell-derived factor-1alpha (SDF-1alpha/CXCL12).

Christoph Seibert, B. Volkman, F. Peterson, 2006, Journal of molecular biology.

New paradigms in chemokine receptor signal transduction: Moving beyond the two-site model.

B. Volkman, Amanda M. Nevins, A. Getschman, 2016, Biochemical pharmacology.

Sequential tyrosine sulfation of CXCR4 by tyrosylprotein sulfotransferases.

B. Chait, B. Volkman, F. Peterson, 2008, Biochemistry.

Structural Basis of CXCR4 Sulfotyrosine Recognition by the Chemokine SDF-1/CXCL12

Christoph Seibert, B. Volkman, F. Peterson, 2008, Science Signaling.

Structural and agonist properties of XCL2, the other member of the C-chemokine subfamily.

B. Volkman, O. Yoshie, R. Tyler, 2015, Cytokine.

Monomeric and dimeric CXCL12 inhibit metastasis through distinct CXCR4 interactions and signaling pathways

N. Heveker, B. Volkman, S. Gravel, 2011, Proceedings of the National Academy of Sciences.

N-terminal Residues of Plasmatocyte-spreading Peptide Possess Specific Determinants Required for Biological Activity*

B. Volkman, M. Strand, Y. Hayakawa, 2001, The Journal of Biological Chemistry.

Electrostatic optimization of the conformational energy landscape in a metamorphic protein.

B. Volkman, F. Peterson, R. Tyler, 2012, Biochemistry.

Detailed NMR Analysis of the Heme-Protein Interactions in Component IV Glycera dibranchiata Monomeric Hemoglobin-CO

J. Markley, B. Volkman, J. Satterlee, 1998, Journal of biomolecular NMR.

Microscopic pKa values of Escherichia coli thioredoxin.

R. Raines, J. Markley, B. Volkman, 1997, Biochemistry.

Structure of the Insect Cytokine Peptide Plasmatocyte-spreading Peptide 1 from Pseudoplusia includens *

J. Markley, B. Volkman, M. Strand, 1999, The Journal of Biological Chemistry.

Gamma-glutamylcysteine synthetase-glutathione synthetase: domain structure and identification of residues important in substrate and glutathione binding.

B. Volkman, F. Peterson, M. Hayward, 2006, Biochemistry.

Molecular mechanics and dynamic simulations of well-known Kabuki syndrome-associated KDM6A variants reveal putative mechanisms of dysfunction

Michael T. Zimmermann, Brian C. Smith, Nikita R. Dsouza, 2021, Orphanet Journal of Rare Diseases.

The First Structure from the SOUL/HBP Family of Heme-binding Proteins, Murine P22HBP*

B. Goodfellow, B. Volkman, G. C. Ferreira, 2006, Journal of Biological Chemistry.

Determination of internuclear angles of DNA using paramagnetic-assisted magnetic alignment.

B. Volkman, V. Marathias, P. Bolton, 1998, Journal of magnetic resonance.

Pancreatic Cancer Cell Migration and Metastasis Is Regulated by Chemokine-Biased Agonism and Bioenergetic Signaling.

Douglas B. Evans, B. Volkman, A. Getschman, 2015, Cancer research.

Computational modeling reveals key molecular properties and dynamic behavior of disruptor of telomeric silencing 1‐like (DOT1L) and partnering complexes involved in leukemogenesis

Michael T. Zimmermann, Nikita R. Dsouza, M. Zimmermann, 2021, Proteins.

Dynamic Interchanging Native States of Lymphotactin Examined by SNAPP-MS

B. Volkman, R. Julian, R. Tyler, 2011, Journal of the American Society for Mass Spectrometry.

Cytokines and growth factors cross-link heparan sulfate

T. Handel, J. Kühnle, B. Volkman, 2015, Open Biology.

Structure-based ligand discovery for the protein–protein interface of chemokine receptor CXCR4

Michael M. Mysinger, Dahlia R. Weiss, Brian K Shoichet, 2012, Proceedings of the National Academy of Sciences.

A Novel Zinc Finger Is Required for Mcm10 Homocomplex Assembly*

M. Lei, B. Volkman, F. Peterson, 2003, Journal of Biological Chemistry.

Diversity of polyproline recognition by EVH1 domains.

B. Volkman, F. Peterson, 2009, Frontiers in bioscience.

M. Elsalanty, B. Volkman, M. McGee-Lawrence, 2020, Bone reports.

Structure of the N-WASP EVH1 Domain-WIP Complex Insight into the Molecular Basis of Wiskott-Aldrich Syndrome

W. Lim, B. Volkman, F. Peterson, 2002, Cell.

Protein engineering of the chemokine CCL20 prevents psoriasiform dermatitis in an IL-23–dependent murine model

M. Rosenkilde, B. Volkman, A. Getschman, 2017, Proceedings of the National Academy of Sciences.

Unfolding of the C-terminal domain of the J-protein Zuo1 releases autoinhibition and activates Pdr1-dependent transcription.

E. Craig, B. Volkman, F. Peterson, 2013, Journal of molecular biology.

Mechanistic Insight into the Suppression of Polyglutamine Aggregation by SRCP1.

B. Volkman, F. Peterson, K. Scaglione, 2023, ACS chemical biology.

Conversion of the enzyme guanylate kinase into a mitotic-spindle orienting protein by a single mutation that inhibits GMP-induced closing

C. Doe, B. Volkman, C. A. Johnston, 2011, Proceedings of the National Academy of Sciences.

Evolution of an ancient protein function involved in organized multicellularity in animals

N. King, B. Volkman, J. W. Thornton, 2016, eLife.

The CXC Chemokine Receptor 4 Ligands Ubiquitin and Stromal Cell-derived Factor-1α Function through Distinct Receptor Interactions*

B. Volkman, A. Marchese, E. Campbell, 2011, The Journal of Biological Chemistry.

Identification of the Major Ubiquitin-binding Domain of the Pseudomonas aeruginosa ExoU A2 Phospholipase*

David M. Anderson, A. Haas, B. Volkman, 2013, The Journal of Biological Chemistry.

NMR solution structure of plastocyanin from the photosynthetic prokaryote, Prochlorothrix hollandica.

B. Volkman, G. Bullerjahn, C. R. Babu, 1999, Biochemistry.

Secondary structure and calcium-induced folding of the Clostridium thermocellum dockerin domain determined by NMR spectroscopy.

W. M. Westler, B. Volkman, J. Wu, 2000, Archives of Biochemistry and Biophysics.

The non-ELR CXC chemokine encoded by human cytomegalovirus UL146 genotype 5 contains a C-terminal β-hairpin and induces neutrophil migration as a selective CXCR2 agonist

B. Volkman, F. Peterson, M. Rosenkilde, 2022, PLoS pathogens.

The C-terminal peptide of CCL21 drastically augments CCL21 activity through the dendritic cell lymph node homing receptor CCR7 by interaction with the receptor N-terminus

M. Rosenkilde, B. Volkman, F. Vilhardt, 2021, Cellular and Molecular Life Sciences.

Solution structure and backbone dynamics of component IV Glycera dibranchiata monomeric hemoglobin-CO.

J. Markley, B. Volkman, J. Satterlee, 1998, Biochemistry.

Polysialylation controls dendritic cell trafficking by regulating chemokine recognition

Karl Mechtler, Brian F. Volkman, Michael Sixt, 2016, Science.

Prospects for targeting ACKR1 in cancer and other diseases

B. Volkman, Kyler S. Crawford, Kyler S. Crawford, 2023, Frontiers in Immunology.

Specific binding‐induced modulation of the XCL1 metamorphic equilibrium

B. Volkman, F. Peterson, Acacia F. Dishman, 2020, Biopolymers.

Orphan Macrodomain Protein (Human C6orf130) Is an O-Acyl-ADP-ribose Deacylase

J. Denu, B. Volkman, I. Ahel, 2011, The Journal of Biological Chemistry.

The Chemokine, CCL20, and Its Receptor, CCR6, in the Pathogenesis and Treatment of Psoriasis and Psoriatic Arthritis

B. Volkman, F. Peterson, T. Mabuchi, 2023, Journal of Psoriasis and Psoriatic Arthritis.

A negative feedback loop maintains optimal chemokine concentrations for directional cell migration

M. Meier-Schellersheim, B. Volkman, F. Peterson, 2020, Nature Cell Biology.

Structural basis for chemokine recognition by a G protein–coupled receptor and implications for receptor activation

N. Heveker, N. London, B. Volkman, 2017, Science Signaling.

Structural basis for selective activation of ABA receptors

G. Phillips, S. Cutler, B. Volkman, 2010, Nature Structural &Molecular Biology.

Fragment-based drug discovery of small molecule ligands for the human chemokine CCL28

Brian C. Smith, B. Volkman, F. Peterson, 2023, SLAS discovery : advancing life sciences R & D.

NMR Structure of the C-Terminal Transmembrane Domain of the HDL Receptor, SR-BI, and a Functionally Relevant Leucine Zipper Motif.

B. Volkman, F. Peterson, Davin R. Jensen, 2017, Structure.

Expression, purification and reconstitution of the C-terminal transmembrane domain of scavenger receptor BI into detergent micelles for NMR analysis.

B. Volkman, F. Peterson, Davin R. Jensen, 2015, Protein expression and purification.

Structure and Dimerization of IreB, a Negative Regulator of Cephalosporin Resistance in Enterococcus faecalis.

B. Volkman, F. Peterson, Jessica Hoff, 2017, Journal of molecular biology.

The Aspartate-Less Receiver (ALR) Domains: Distribution, Structure and Function

B. Volkman, F. Peterson, Lanlan Han, 2015, PLoS pathogens.

Solution structure of a type I dockerin domain, a novel prokaryotic, extracellular calcium-binding domain.

W. M. Westler, B. Volkman, J. Wu, 2001, Journal of molecular biology.

Bacterial expression of the phosphodiester-binding site of the cation-independent mannose 6-phosphate receptor for crystallographic and NMR studies.

B. Volkman, F. Peterson, R. Gundry, 2015, Protein expression and purification.

Heteromerization of chemokine (C-X-C motif) receptor 4 with α1A/B-adrenergic receptors controls α1-adrenergic receptor function

B. Volkman, V. Gaponenko, T. Chavan, 2015, Proceedings of the National Academy of Sciences.

Targeted biologic inhibition of both tumor cell-intrinsic and intercellular CLPTM1L/CRR9-mediated chemotherapeutic drug resistance

B. Volkman, F. Peterson, S. Pradeep, 2021, npj Precision Oncology.

Chemical shift mapping of the RNA-binding interface of the multiple-RBD protein sex-lethal.

D. Rio, D. Wemmer, D. Barbash, 1997, Biochemistry.

The Solution Structure of CCL28 Reveals Structural Lability that Does Not Constrain Antifungal Activity.

B. Volkman, F. Peterson, A. Huppler, 2018, Journal of molecular biology.

Different contributions of chemokine N‐terminal features attest to a different ligand binding mode and a bias towards activation of ACKR3/CXCR7 compared with CXCR4 and CXCR3

N. Heveker, B. Volkman, Amanda M. Nevins, 2017, British journal of pharmacology.

Crystallographic Structure of Truncated CCL21 and the Putative Sulfotyrosine-Binding Site.

B. Volkman, Emmanuel W Smith, Yu Chen, 2016, Biochemistry.

Structure-Function Analysis of CCL28 in the Development of Post-viral Asthma*

B. Volkman, Amanda M. Nevins, F. Peterson, 2015, The Journal of Biological Chemistry.

Role of CCL 28 structure in asthma 1 Structure-function analysis of CCL 28 in the development of post-viral asthma

B. Volkman, Amanda M. Nevins, F. Peterson, 2015 .

Monomeric structure of the cardioprotective chemokine SDF‐1/CXCL12

B. Volkman, F. Peterson, Christopher T. Veldkamp, 2009, Protein science : a publication of the Protein Society.

Structural Rearrangement of Human Lymphotactin, a C Chemokine, under Physiological Solution Conditions*

J. Markley, B. Volkman, D. McCaslin, 2002, The Journal of Biological Chemistry.

Solution Structure of a Ubiquitin-like Domain from Tubulin-binding Cofactor B*

Ming Luo, John L Markley, S. Qiu, 2004, Journal of Biological Chemistry.

Multiple WASP-interacting Protein Recognition Motifs Are Required for a Functional Interaction with N-WASP*

W. Lim, B. Volkman, F. Peterson, 2007, Journal of Biological Chemistry.

Allosteric activation of the Par-6 PDZ via a partial unfolding transition.

B. Volkman, E. L. Kovrigin, F. Peterson, 2013, Journal of the American Chemical Society.

A conformational switch in the CRIB-PDZ module of Par-6.

B. Volkman, F. Peterson, Dustin S. Whitney, 2011, Structure.

Evolution of a Protein Interaction Domain Family by Tuning Conformational Flexibility.

B. Volkman, K. Prehoda, Dustin S. Whitney, 2016, Journal of the American Chemical Society.

Some (dis)assembly required: partial unfolding in the Par-6 allosteric switch

B. Volkman, Dustin S. Whitney, 2015, Biophysical Reviews.

Staphylococcal superantigens induce lymphotactin production by human CD4+ and CD8+ T cells.

B. Volkman, C. Pauza, M. Wallace, 2001, Cytokine.

Site-specific isotopic labeling of proteins for NMR studies

D. Wemmer, B. Volkman, J. Ellman, 1992 .

Dynamic control of plant water use using designed ABA receptor agonists

S. Cutler, B. Volkman, F. Peterson, 2019, Science.

A Rationally Designed Agonist Defines Subfamily IIIA Abscisic Acid Receptors As Critical Targets for Manipulating Transpiration.

S. Cutler, B. Volkman, F. Peterson, 2017, ACS chemical biology.

Agrochemical control of plant water use using engineered abscisic acid receptors

Brian F. Volkman, S. Cutler, B. Volkman, 2015, Nature.

Modulation of the CXC chemokine receptor 4 agonist activity of ubiquitin through C-terminal protein modification.

B. Volkman, Wei-Jen Tang, A. Marchese, 2013, Biochemistry.

Solution structure of thioredoxin h1 from Arabidopsis thaliana

J. Markley, B. Volkman, F. Peterson, 2004, Protein science : a publication of the Protein Society.

TERTIARY STRUCTURE OF APO-D-ALANYL CARRIER PROTEIN

B. Volkman, G. Kresheck, F. Neuhaus, 2001 .

Chemokine (C-X-C Motif) Receptor 4 and Atypical Chemokine Receptor 3 Regulate Vascular α1-Adrenergic Receptor Function

R. Gamelli, B. Volkman, Amanda M. Nevins, 2014, Molecular medicine.

Structures of proteins of biomedical interest from the Center for Eukaryotic Structural Genomics

E. Bae, B. Fox, S. Twigger, 2007, Journal of Structural and Functional Genomics.

Click-to-lead design of a picomolar ABA receptor antagonist with potent activity in vivo

S. Cutler, B. Volkman, F. Peterson, 2021, Proceedings of the National Academy of Sciences.

Three-dimensional solution structure of the N-terminal receiver domain of NTRC.

D E Wemmer, D. Wemmer, S. Kustu, 1995, Biochemistry.

DPP4-Truncated CXCL12 Alters CXCR4/ACKR3 Signaling, Osteogenic Cell Differentiation, Migration, and Senescence.

B. Volkman, M. McGee-Lawrence, L. Luttrell, 2022, ACS pharmacology & translational science.

Solution structure of T4moC, the Rieske ferredoxin component of the toluene 4-monooxygenase complex

B. Fox, W. M. Westler, J. Markley, 2004, JBIC Journal of Biological Inorganic Chemistry.

Deletion of a single amino acid changes the folding of an apamin hybrid sequence peptide to that of endothelin.

D. Wemmer, B. Volkman, 1997, Biopolymers.

An NMR structural study of nickel-substituted rubredoxin

J. Markley, B. Goodfellow, B. Volkman, 2009, JBIC Journal of Biological Inorganic Chemistry.

Refined structure and metal binding site of the kalata B1 peptide.

B. Volkman, K. Sletten, L. Skjeldal, 2002, Archives of biochemistry and biophysics.

Assignment of 1H, 13C, and 15N signals of oxidized Clostridium pasteurianum rubredoxin

J. Markley, B. Volkman, S. J. Wilkens, 1997, Journal of biomolecular NMR.

Binding site identification and structure determination of protein-ligand complexes by NMR a semiautomated approach.

B. Volkman, F. Peterson, Betsy L Lytle, 2011, Methods in enzymology.

Structural determinants involved in the regulation of CXCL14/BRAK expression by the 26 S proteasome.

B. Volkman, F. Peterson, S. Schwarze, 2006, Journal of molecular biology.

Exploiting agonist biased signaling of chemokines to target cancer

B. Volkman, A. Getschman, M. Dwinell, 2017, Molecular carcinogenesis.

Engineering Metamorphic Chemokine Lymphotactin/XCL1 into the GAG-Binding, HIV-Inhibitory Dimer Conformation.

B. Volkman, F. Peterson, P. Lusso, 2015, ACS chemical biology.

Electron capture dissociation and drift tube ion mobility-mass spectrometry coupled with site directed mutations provide insights into the conformational diversity of a metamorphic protein.

C. MacPhee, M. Porrini, P. Barran, 2015, Physical chemistry chemical physics : PCCP.

Native-state interconversion of a metamorphic protein requires global unfolding.

B. Volkman, F. Peterson, R. Tyler, 2011, Biochemistry.

Sulfotyrosine Recognition as Marker for Druggable Sites in the Extracellular Space

B. Volkman, F. Peterson, Christopher T. Veldkamp, 2011, International journal of molecular sciences.

An engineered second disulfide bond restricts lymphotactin/XCL1 to a chemokine-like conformation with XCR1 agonist activity.

B. Volkman, F. Peterson, R. Tuinstra, 2007, Biochemistry.

On-column refolding of recombinant chemokines for NMR studies and biological assays.

B. Volkman, F. Peterson, Christopher T. Veldkamp, 2007, Protein expression and purification.

Practical Model Fitting Approaches to the Direct Extraction of NMR Parameters Simultaneously from All Dimensions of Multidimensional NMR Spectra

R. Chylla, J. Markley, B. Volkman, 1998, Journal of biomolecular NMR.

Residues within a lipid-associated segment of the PECAM-1 cytoplasmic domain are susceptible to inducible, sequential phosphorylation.

B. Volkman, F. Peterson, P. Newman, 2011, Blood.

Asymmetrical ligand-induced cross-regulation of chemokine (C-X-C motif) receptor 4 by α1-adrenergic receptors at the heteromeric receptor complex

B. Volkman, V. Gaponenko, Xianlong Gao, 2018, Scientific Reports.

Functional and structural consequences of chemokine (C-X-C motif) receptor 4 activation with cognate and non-cognate agonists

B. Volkman, V. Gaponenko, Xianlong Gao, 2017, Molecular and Cellular Biochemistry.

Structural basis for recognition of phosphodiester-containing lysosomal enzymes by the cation-independent mannose 6-phosphate receptor

B. Volkman, F. Peterson, N. Dahms, 2010, Proceedings of the National Academy of Sciences.

Design of stimulus-responsive two-state hinge proteins

Maxx H. Tessmer, B. Sankaran, Jeff Nivala, 2023, bioRxiv.

Tyrosine-sulfated V2 peptides inhibit HIV-1 infection via coreceptor mimicry

X. Ambroggio, L. De Gioia, B. Volkman, 2016, EBioMedicine.

Partial agonist activity of α1-adrenergic receptor antagonists for chemokine (C-X-C motif) receptor 4 and atypical chemokine receptor 3

B. Volkman, V. Gaponenko, Xianlong Gao, 2018, PloS one.

Targeting the CCR6/CCL20 Axis in Entheseal and Cutaneous Inflammation

Machelle D. Wilson, B. Volkman, A. Getschman, 2021, Arthritis & rheumatology.

Sulfopeptide probes of the CXCR4/CXCL12 interface reveal oligomer-specific contacts and chemokine allostery.

T. Handel, B. Volkman, R. Payne, 2013, ACS chemical biology.

Heparin Oligosaccharides Inhibit Chemokine (CXC Motif) Ligand 12 (CXCL12) Cardioprotection by Binding Orthogonal to the Dimerization Interface, Promoting Oligomerization, and Competing with the Chemokine (CXC Motif) Receptor 4 (CXCR4) N Terminus*

R. Linhardt, B. Volkman, Fuming Zhang, 2012, The Journal of Biological Chemistry.

Comparison of cell‐based and cell‐free protocols for producing target proteins from the Arabidopsis thaliana genome for structural studies

G. Phillips, Qin Zhao, Craig S. Newman, 2005, Proteins.

Zinc‐substituted Desulfovibrio gigas desulforedoxins: Resolving subunit degeneracy with nonsymmetric pseudocontact shifts

J. Markley, B. Goodfellow, B. Volkman, 2002, Protein science : a publication of the Protein Society.

Evolution of fold switching in a metamorphic protein

M. Babu, B. Volkman, F. Peterson, 2020, Science.

Lymphotactin structural dynamics

B. Volkman, F. Peterson, Tina Y. Liu, 2013 .

Monomeric solution structure of the prototypical 'C' chemokine lymphotactin.

J. Markley, B. Volkman, D. McCaslin, 2001, Biochemistry.

Combine and Conquer: Surfactants, Solvents, and Chaotropes for Robust Mass Spectrometry Based Analyses of Membrane Proteins

Rebekah L. Gundry, B. Volkman, Kathleen R. Noon, 2014, Analytical chemistry.

Binding of Crumbs to the Par-6 CRIB-PDZ Module Is Regulated by Cdc42.

B. Volkman, F. Peterson, K. Prehoda, 2016, Biochemistry.

Correction: Evolution of an ancient protein function involved in organized multicellularity in animals

N. King, B. Volkman, J. W. Thornton, 2016, eLife.

Cell-free protein production and labeling protocol for NMR-based structural proteomics

John L Markley, J. Markley, B. Volkman, 2004, Nature Methods.

The NMR solution structure of BeF(3)(-)-activated Spo0F reveals the conformational switch in a phosphorelay system.

D. Kern, A. Gardino, D. Wemmer, 2003, Journal of molecular biology.

Interplay of Electrostatics and Hydrophobic Effects in the Metamorphic Protein Human Lymphotactin.

Q. Cui, B. Volkman, E. N. Korkmaz, 2015, The journal of physical chemistry. B.

Macromolecular structure determination by NMR spectroscopy.

John L Markley, Eldon L Ulrich, W. M. Westler, 2005, Methods of biochemical analysis.

Biased antagonism of CXCR4 avoids antagonist tolerance

Brian F. Volkman, Nadya I. Tarasova, N. Heveker, 2018, Science Signaling.

A single mutation promotes amyloidogenicity through a highly promiscuous dimer interface.

B. Volkman, M. Ramirez-Alvarado, F. Peterson, 2010, Structure.

A modified ELISA assay differentiates CCL20 locked dimers from wild-type monomers.

B. Volkman, F. Peterson, W. Clarke, 2023, Journal of immunological methods.

A Locked, Dimeric CXCL12 Variant Effectively Inhibits Pulmonary Metastasis of CXCR4-Expressing Melanoma Cells Due to Enhanced Serum Stability

B. Volkman, T. Takekoshi, Joshua J. Ziarek, 2012, Molecular Cancer Therapeutics.

Examination of Glycosaminoglycan Binding Sites on the XCL1 Dimer.

R. Linhardt, T. Handel, B. Volkman, 2016, Biochemistry.

Production in two-liter beverage bottles of proteins for NMR structure determination labeled with either 15N- or 13C-15N

S. Thao, Qin Zhao, B. Fox, 2004, Journal of Structural and Functional Genomics.

Dimeric CXCL 12 inhibits lung metastasis of melanoma 1 A locked , dimeric CXCL 12 variant effectively inhibits pulmonary metastasis of CXCR 4-expressing melanoma cells due to enhanced serum stability

B. Volkman, T. Takekoshi, Joshua J. Ziarek, 2012 .

Preclinical Development A Locked , Dimeric CXCL 12 Variant Effectively Inhibits Pulmonary Metastasis of CXCR 4-Expressing Melanoma Cells Due to Enhanced Serum Stability

B. Volkman, T. Takekoshi, Joshua J. Ziarek, 2012 .

Dissecting the dynamic conformations of the metamorphic protein lymphotactin.

C. MacPhee, M. Porrini, P. Barran, 2014, The journal of physical chemistry. B.

Chemokines in colitis: microRNA control

B. Volkman, Christopher T. Veldkamp, M. Dwinell, 2013, Gut.

Distal interactions within the par3-VE-cadherin complex.

B. Volkman, F. Peterson, R. Tyler, 2010, Biochemistry.

Beyond Structural Bioinformatics for Genomics with Dynamics Characterization of an Expanded KRAS Mutational Landscape

Brian C. Smith, B. Volkman, G. Lomberk, 2023, bioRxiv.

De novo design of small beta barrel proteins

David E. Kim, S. Ovchinnikov, L. Carter, 2023, Proceedings of the National Academy of Sciences of the United States of America.

Functional and structural consequences of chemokine (C-X-C motif) receptor 4 activation with cognate and non-cognate agonists

B. Volkman, V. Gaponenko, Xianlong Gao, 2017, Molecular and Cellular Biochemistry.

Interactions between AMOT PPxY motifs and NEDD4L WW domains function in HIV-1 release

W. Sundquist, B. Volkman, F. Peterson, 2021, The Journal of biological chemistry.

Development and validation of a purification system for functional full-length human SR-B1 and CD36

B. Volkman, D. Sahoo, Hayley R. Powers, 2023, The Journal of biological chemistry.

Project management system for structural and functional proteomics: Sesame

George N. Phillips, John L. Markley, Jing Li, 2004, Journal of Structural and Functional Genomics.

A Multi-Layered Computational Structural Genomics Approach Enhances Domain-Specific Interpretation of Kleefstra Syndrome Variants in EHMT1

B. Volkman, G. Lomberk, A. Mathison, 2023, bioRxiv.

Electron capture dissociation and drift tube ion mobility-mass spectrometry coupled with site directed mutations provide insights into the conformational diversity of a metamorphic protein.

C. MacPhee, M. Porrini, P. Barran, 2015, Physical chemistry chemical physics : PCCP.

Natural and engineered chemokine (C-X-C motif) receptor 4 agonists prevent acute respiratory distress syndrome after lung ischemia–reperfusion injury and hemorrhage

B. Volkman, Xianlong Gao, M. Majetschak, 2020, Scientific Reports.

Pancreatic Cancer Cell Migration and Metastasis Is Regulated by Chemokine-Biased Agonism and Bioenergetic Signaling.

Douglas B. Evans, B. Volkman, B. Kalyanaraman, 2015, Cancer research.

A Locked, Dimeric CXCL12 Variant Effectively Inhibits Pulmonary Metastasis of CXCR4-Expressing Melanoma Cells Due to Enhanced Serum Stability

B. Volkman, T. Takekoshi, Joshua J. Ziarek, 2012, Molecular Cancer Therapeutics.

Interconversion between two unrelated protein folds in the lymphotactin native state

B. Volkman, F. Peterson, E. S. Elgin, 2008, Proceedings of the National Academy of Sciences.

NMR Structure of the C-Terminal Transmembrane Domain of the HDL Receptor, SR-BI, and a Functionally Relevant Leucine Zipper Motif.

B. Volkman, F. Peterson, Davin R. Jensen, 2017, Structure.

Chemokine (C-X-C Motif) Receptor 4 and Atypical Chemokine Receptor 3 Regulate Vascular α1-Adrenergic Receptor Function

R. Gamelli, B. Volkman, Amanda M. Nevins, 2014, Molecular medicine.

CXC chemokine receptor 4 signaling upon co-activation with stromal cell-derived factor-1α and ubiquitin.

B. Volkman, Abhishek Tripathi, M. Majetschak, 2014, Cytokine.

Electrostatic optimization of the conformational energy landscape in a metamorphic protein.

B. Volkman, F. Peterson, R. Tyler, 2012, Biochemistry.

Chemokines in colitis: microRNA control

B. Volkman, Christopher T. Veldkamp, M. Dwinell, 2013, Gut.

Solution NMR spectroscopy of GPCRs: Residue-specific labeling strategies with a focus on 13C-methyl methionine labeling of the atypical chemokine receptor ACKR3.

T. Handel, B. Volkman, Martin Gustavsson, 2019, Methods in cell biology.

An orthogonalized PYR1-based CID module with reprogrammable ligand-binding specificity

Dmitri A. Nusinow, B. Volkman, F. Peterson, 2023, Nature chemical biology.

Structures of two Arabidopsis thaliana major latex proteins represent novel helix‐grip folds

G. Phillips, B. Volkman, Jikui Song, 2009, Proteins.

Evidence for oxidation-state-dependent conformational changes in human ferredoxin from multinuclear, multidimensional NMR spectroscopy.

J. Markley, B. Volkman, B. Xia, 1998, Biochemistry.

Deep computational phenotyping of genomic variants impacting the SET domain of KMT2C reveal molecular mechanisms for their dysfunction

Jose Lizarraga Mazaba, B. Volkman, G. Lomberk, 2023, Frontiers in genetics.

A multi-layered computational structural genomics approach enhances domain-specific interpretation of Kleefstra syndrome variants in EHMT1

B. Volkman, G. Lomberk, A. Mathison, 2023, Computational and structural biotechnology journal.

Beyond structural bioinformatics for genomics with dynamics characterization of an expanded KRAS mutational landscape

B. Volkman, G. Lomberk, A. Mathison, 2023, Computational and structural biotechnology journal.

Protonation behavior of histidine 24 and histidine 119 in forming the pH 4 folding intermediate of apomyoglobin.

B. Volkman, B. Geierstanger, B F Volkman, 1998, Biochemistry.

Letter to the Editor: Structure of the hypothetical protein At3g17210 from Arabidopsis thaliana*

G. Phillips, S. Thao, Qin Zhao, 2004, Journal of biomolecular NMR.

Solution structure of At3g28950 from Arabidopsis thaliana

B. Volkman, F. Peterson, N. B. De la Cruz, 2008, Proteins.

Orphan Macrodomain Protein (Human C6orf130) Is an O-Acyl-ADP-ribose Deacylase

J. Denu, B. Volkman, F. Peterson, 2011, The Journal of Biological Chemistry.

Structural Basis of Nanobody Induced ACKR3 Inhibition

B. Volkman, M. Smit, J. McCorvy, 2022, FASEB journal : official publication of the Federation of American Societies for Experimental Biology.

Rapid, robotic, small‐scale protein production for NMR screening and structure determination

B. Volkman, F. Peterson, Margie Li, 2010, Protein science : a publication of the Protein Society.

Solution structure of BC059385 from Homo sapiens

B. Volkman, F. Peterson, B. Lytle, 2006 .

Solution Structure of a Human C2H2-type Zinc Finger Protein

B. Volkman, F. Peterson, B. Lytle, 2005 .