D. S. Gross

发表

p53 Interacts with RNA Polymerase II through Its Core Domain and Impairs Pol II Processivity In Vivo

Sunyoung Kim, S. K. Balakrishnan, D. S. Gross, 2011, PloS one.

Nuclease hypersensitive sites in chromatin.

D. S. Gross, W. Garrard, 1988, Annual review of biochemistry.

Cooperative Binding of Heat Shock Factor to the Yeast HSP82 Promoter In Vivo and In Vitro

E. Sekinger, D. S. Gross, A. M. Erkine, 1999, Molecular and Cellular Biology.

The Skn7 response regulator of Saccharomyces cerevisiae interacts with Hsf1 in vivo and is required for the induction of heat shock genes by oxidative stress.

D. Raitt, L. Johnston, A. Johnson, 2000, Molecular biology of the cell.

Poising chromatin for transcription

D. S. Gross, W. Garrard, 1987 .

5-methylcytosine is localized in nucleosomes that contain histone H1.

D. S. Gross, W. Garrard, D. J. Ball, 1983, Proceedings of the National Academy of Sciences of the United States of America.

Hsf1 and Hsp70 constitute a two-component feedback loop that regulates the yeast heat shock response

Ahmad S. Khalil, D. Pincus, D. S. Gross, 2017, bioRxiv.

Hsf1 and Hsp70 constitute a two-component feedback loop that regulates the yeast heat shock response

Ahmad S. Khalil, D. Pincus, D. S. Gross, 2017, bioRxiv.

Multiple protein-DNA interactions over the yeast HSC82 heat shock gene promoter.

D. S. Gross, A. M. Erkine, M. Gao, 1995, Nucleic acids research.

Conditional silencing: the HMRE mating-type silencer exerts a rapidly reversible position effect on the yeast HSP82 heat shock gene

D. S. Gross, S. Lee, 1993, Molecular and cellular biology.

Bacterial growth medium that significantly increases the yield of recombinant plasmid.

D. S. Gross, H. M. Duttweiler, 1998, BioTechniques.

The ubiquitous potential Z-forming sequence of eucaryotes, (dT-dG)n . (dC-dA)n, is not detectable in the genomes of eubacteria, archaebacteria, or mitochondria

D. S. Gross, W. Garrard, 1986, Molecular and cellular biology.

Phase-separation antagonists potently inhibit transcription and broadly increase nucleosome density

D. S. Gross, R. Meduri, S. Mohajan, 2022, The Journal of biological chemistry.

Chromatin

D. S. Gross, J. Anandhakumar, Amoldeep S. Kainth, 2015, Current Biology.

Primordial super-enhancers: heat shock-induced chromatin organization in yeast.

D. Pincus, D. S. Gross, Amoldeep S. Kainth, 2021, Trends in cell biology.

Genetic and epigenetic determinants establish a continuum of Hsf1 occupancy and activity across the yeast genome

Michael J. Guertin, D. Pincus, D. S. Gross, 2018, bioRxiv.

Chromosome Conformation Capture That Detects Novel Cis- and Trans-Interactions in Budding Yeast.

D. S. Gross, Amoldeep S. Kainth, Surabhi Chowdhary, 2020, Methods.

Silenced Chromatin Is Permissive to Activator Binding and PIC Recruitment

E. Sekinger, D. S. Gross, 2001, Cell.

SIR repression of a yeast heat shock gene: UAS and TATA footprints persist within heterochromatin

E. Sekinger, D. S. Gross, 1999, The EMBO journal.

Heat shock factor gains access to the yeast HSC82 promoter independently of other sequence-specific factors and antagonizes nucleosomal repression of basal and induced transcription

D. S. Gross, A. M. Erkine, T. Diken, 1996, Molecular and cellular biology.

Dynamic Chromatin Alterations Triggered by Natural and Synthetic Activation Domains*

D. S. Gross, A. M. Erkine, 2003, The Journal of Biological Chemistry.

Heterochromatin: Dark Matter or Variation on a Theme?

D. S. Gross, 2015, Current Biology.

Chromatin and cancer: Causes and consequences

D. S. Gross, H Singh, E A Sekinger, 2000, Journal of cellular biochemistry. Supplement.

Uncoupling Transcription from Covalent Histone Modification

D. S. Gross, Lu Gao, J. Anandhakumar, 2014, PLoS genetics.

A critical role for heat shock transcription factor in establishing a nucleosome‐free region over the TATA‐initiation site of the yeast HSP82 heat shock gene.

D. S. Gross, S. Lee, C. Adams, 1993, The EMBO journal.

The yeast heat shock response is induced by conversion of cells to spheroplasts and by potent transcriptional inhibitors

D. S. Gross, C. Adams, Christopher C. Adams, 1991, Journal of bacteriology.

Genomic footprinting of the yeast HSP82 promoter reveals marked distortion of the DNA helix and constitutive occupancy of heat shock and TATA elements.

D. S. Gross, K. English, S. Lee, 1990, Journal of molecular biology.

Basal-level expression of the yeast HSP82 gene requires a heat shock regulatory element

D. S. Gross, M. Lee, W. Garrard, 1989, Molecular and cellular biology.

Therapeutics: Harnessing the Power of Molecular and Pharmacological Chaperones

D. S. Gross, R. Klein, S. N. Witt, 2011 .

Heat Shock Factor Potentiates the Promoter Chromatin Structure of the Yeast HSP90 Genes

D. S. Gross, 1995 .

Vacuum blotting: a simple method for transferring DNA from sequencing gels to nylon membranes.

D. S. Gross, W. Garrard, E. M. Hernandez, 1988, Gene.

Using genomics and proteomics to investigate mechanisms of transcriptional silencing in Saccharomyces cerevisiae.

D. S. Gross, Lu Gao, 2006, Briefings in functional genomics & proteomics.

Promoter function and in situ protein/DNA interactions upstream of the yeast HSP90 heat shock genes

D. S. Gross, K. English, C. Adams, 1990, Antonie van Leeuwenhoek.

A Functional Module of Yeast Mediator That Governs the Dynamic Range of Heat-Shock Gene Expression

David S Gross, D. S. Gross, A. M. Erkine, 2006, Genetics.

Mediator Recruitment to Heat Shock Genes Requires Dual Hsf1 Activation Domains and Mediator Tail Subunits Med15 and Med16*

Sunyoung Kim, D. S. Gross, 2013, The Journal of Biological Chemistry.

Sir proteins as transcriptional silencers.

D. S. Gross, 2001, Trends in biochemical sciences.

Cell Cycle-Dependent Binding of Yeast Heat Shock Factor to Nucleosomes

D. S. Gross, A. M. Erkine, C. B. Venturi, 2000, Molecular and Cellular Biology.

Heat Shock Factor 1 Drives Intergenic Association of Its Target Gene Loci upon Heat Shock

D. Pincus, D. S. Gross, Amoldeep S. Kainth, 2018, bioRxiv.

Evidence for Multiple Mediator Complexes in Yeast Independently Recruited by Activated Heat Shock Factor

D. S. Gross, J. Anandhakumar, Yara Moustafa, 2016, Molecular and Cellular Biology.

Domain-Wide Displacement of Histones by Activated Heat Shock Factor Occurs Independently of Swi/Snf and Is Not Correlated with RNA Polymerase II Density

D. S. Gross, Jing Zhao, J. Herrera-Díaz, 2005, Molecular and Cellular Biology.

Role of Mediator in Regulating Pol II Elongation and Nucleosome Displacement in Saccharomyces cerevisiae

Sunyoung Kim, D. S. Gross, Jing Zhao, 2012, Genetics.

The tumor suppressor p53 associates with gene coding regions and co-traverses with elongating RNA polymerase II in an in vivo model

S. K. Balakrishnan, D. S. Gross, 2008, Oncogene.

Epigenetic silencing mechanisms in budding yeast and fruit fly: different paths, same destinations.

V. Pirrotta, D. S. Gross, 2005, Molecular cell.

Inducible transcriptional condensates drive 3D genome reorganization in the heat shock response

D. Pincus, D. S. Gross, Amoldeep S. Kainth, 2021, bioRxiv.

Sir2 Silences Gene Transcription by Targeting the Transition between RNA Polymerase II Initiation and Elongation

D. S. Gross, Lu Gao, 2008, Molecular and Cellular Biology.

Methods for Mapping Three-Dimensional Genome Architecture.

Surabhi Chowdhary, Amoldeep S Kainth, David S Gross, 2019, Methods.

Heat Shock Protein Genes Undergo Dynamic Alteration in Their Three-Dimensional Structure and Genome Organization in Response to Thermal Stress

D. S. Gross, Amoldeep S. Kainth, Surabhi Chowdhary, 2017, Molecular and Cellular Biology.

Chromatin structure of the potential Z-forming sequence (dT-dG)n X (dC-dA)n. Evidence for an "alternating-B" conformation.

D. S. Gross, W. Garrard, S. Huang, 1985, Journal of molecular biology.

SAGA and Rpd3 Chromatin Modification Complexes Dynamically Regulate Heat Shock Gene Structure and Expression*

D. S. Gross, Selena B Kremer, 2009, The Journal of Biological Chemistry.

The upstream sequences of the HSP82 and HSC82 genes of Saccharomyces cerevisiae: Regulatory elements and nucleosome positioning motifs

D. S. Gross, Alexander M. Erkine, Christopher Szent‐Gyorgyi, 1995, Yeast.

α-Synuclein Targets the Plasma Membrane via the Secretory Pathway and Induces Toxicity in Yeast

R. Zweig, D. S. Gross, N. Mathias, 2005, Genetics.

Degenerate 3 ′-Dideoxy-Terminated Competitors of PCR Primers Increase Specificity of Amplification

D. S. Gross, H. M. Duttweiler, 1999 .

A single-tube RNA prep for northern analysis from yeast and other cell types

D. S. Gross, H. M. Duttweiler, 1997 .

Heat Shock Factor 1 Dynamically Restructures the Yeast Genome

D. S. Gross, Amoldeep S. Kainth, Surabhi Chowdhary, 2018 .

Chromatin and cancer: Causes and consequences

E. Sekinger, D. S. Gross, Harpreet Singh, 2000, Journal of cellular biochemistry. Supplement.

Shugoshin 2—a new guardian for heat shock transcription

D. S. Gross, R. Meduri, Linda S. Rubio, 2019, The EMBO journal.

SAGA and Rpd3 Chromatin Modification Complexes Dynamically Regulate Heat Shock Gene Structure and Expression*

D. S. Gross, Selena B Kremer, 2009, The Journal of Biological Chemistry.

Ethanol stress induces transient restructuring of the yeast genome yet stable formation of Hsf1 transcriptional condensates

D. S. Gross, Linda S. Rubio, Suman Mohajan, 2023, bioRxiv.

A critical role for Pol II CTD phosphorylation in heterochromatic gene activation

D. S. Gross, Amoldeep S. Kainth, Hesheng Zhang, 2024, bioRxiv.

Heat Shock Factor 1 Dynamically Restructures the Yeast Genome

D. S. Gross, Amoldeep S. Kainth, Surabhi Chowdhary, 2018 .