P. Qiu

发表

Analyses of p53 Target Genes in the Human Genome by Bioinformatic and Microarray Approaches* 210

Yaolin Wang, Luquan Wang, Luquan Wang, 2001, The Journal of Biological Chemistry.

Biomimetic tubular scaffold with heparin conjugation for rapid degradation in in situ regeneration of a small diameter neoartery.

Y. E. Chen, P. Qiu, P. Ma, 2021, Biomaterials.

Genome wide in silico SNP-tumor association analysis

Luquan Wang, Wei Ding, P. Qiu, 2004, BMC Cancer.

Data Interoperability of Whole Exome Sequencing (WES) Based Mutational Burden Estimates from Different Laboratories

M. Marton, P. Qiu, Ling Pang, 2016, International journal of molecular sciences.

Recent advances in computational promoter analysis in understanding the transcriptional regulatory network.

P. Qiu, 2003, Biochemical and biophysical research communications.

Organization of the mitochondrial genome of Odontobutis sinensis (Perciformes: Odontobutidae): rearrangement of tRNAs and additional non-coding regions

P. Qiu, Zhihong Ma, Xuefen Yang, 2015, Mitochondrial DNA.

Reference genome sequences of two cultivated allotetraploid cottons, Gossypium hirsutum and Gossypium barbadense

Ling Min, Lili Tu, Baoqi Li, 2018, Nature Genetics.

Identification of a novel endogenous regulatory element in Chinese hamster ovary cells by promoter trap.

P. Qiu, Zhong Liu, Jan-Fang Chen, 2013, Journal of biotechnology.

Human members of the eukaryotic protein kinase family

Luquan Wang, Ferdous Gheyas, F. Gheyas, 2002, Genome Biology.

Identification of HCV protease inhibitor resistance mutations by selection pressure-based method

X. Tong, P. Qiu, J. Greene, 2009, Nucleic acids research.

Structure-Function Analysis of Human Immunodeficiency Virus Type 1 gp120 Amino Acid Mutations Associated with Resistance to the CCR5 Coreceptor Antagonist Vicriviroc

J. Howe, P. Qiu, R. Ralston, 2009, Journal of Virology.

Clinical resistance to vicriviroc through adaptive V3 loop mutations in HIV-1 subtype D gp120 that alter interactions with the N-terminus and ECL2 of CCR5.

J. Howe, P. Qiu, R. Ralston, 2010, Virology.

Gefitinib resistance resulted from STAT3-mediated Akt activation in lung cancer cells

P. Qiu, A. Kowluru, Qingshan Chang, 2013, Oncotarget.

Gene Expression Profiles and Transcription Factors Involved in Parathyroid Hormone Signaling in Osteoblastic Cells

P. Qiu, L. Qin, N. Partridge, 2008 .

Myocardin Enhances Smad 3-Mediated Transforming Growth Factor-1 Signaling in a CArG Box – Independent Manner Smad-Binding Element Is an Important cis Element for SM 22 Transcription In Vivo

Raquel P. Ritchie, Da-Zhi Wang, P. Qiu, 2005 .

Interaction of Smad3 and SRF-associated complex mediates TGF-beta1 signals to regulate SM22 transcription during myofibroblast differentiation.

P. Qiu, Xin-Hua Feng, Li Li, 2003, Journal of molecular and cellular cardiology.

In Vitro Lineage-Specific Differentiation of Vascular Smooth Muscle Cells in Response to SMAD3 Deficiency

D. Milewicz, Dong Zhou, P. Qiu, 2020, Arteriosclerosis, thrombosis, and vascular biology.

A Novel Validation Strategy for Next Generation Sequencing Mutation Profiling in FFPE Tissues

M. Marton, P. Qiu, John Kang, 2016 .

Safety, immunogenicity, and lot-to-lot consistency of live attenuated varicella vaccine in 1-3 years old children: a double-blind, randomized phase III trial

P. Qiu, Xiaoyu Cui, Li-yong Yuan, 2019, Human vaccines & immunotherapeutics.

Differentiation defect in neural crest-derived smooth muscle cells in patients with aortopathy associated with bicuspid aortic valves

D. Milewicz, Jiao Jiao, Y. E. Chen, 2016, EBioMedicine.

Interplay of Amino Acid Residues at Positions 28 and 31 in NS5A Defines Resistance Pathways in Hepatitis C Virus Genotype 2

E. Asante-Appiah, P. Qiu, F. Lahser, 2019, Antimicrobial Agents and Chemotherapy.

Apoptosis Induced by Aqueous Extracts of Crocodile Bile in Human Heptacarcinoma SMMC-7721

P. Qiu, L. Tian, Long Liao, 2013, Applied Biochemistry and Biotechnology.

Thymosin β4 inhibits TNF‐α‐induced NF‐κB activation, IL‐8 expression, and the sensitizing effects by its partners PINCH‐1 and ILK

P. Qiu, Yue Qiu, M. Wheater, 2011, FASEB journal : official publication of the Federation of American Societies for Experimental Biology.

Histone Acetylation and Recruitment of Serum Responsive Factor and CREB-Binding Protein Onto SM22 Promoter During SM22 Gene Expression

P. Qiu, Li Li, 2002, Circulation research.

HCV genotyping using statistical classification approach

Wei Ding, P. Qiu, J. Greene, 2009, Journal of Biomedical Science.

Associations of rs823128, rs1572931, and rs823156 polymorphisms with reduced Parkinson’s disease risks

P. Qiu, F. Lan, Xinghua Huang, 2017, Neuroreport.

FOXF1 Mediates Endothelial Progenitor Functions and Regulates Vascular Sprouting

P. Qiu, R. Hofer-Warbinek, M. Bilban, 2018, Front. Bioeng. Biotechnol..

The Cap Snatching of Segmented Negative Sense RNA Viruses as a Tool to Map the Transcription Start Sites of Heterologous Co-infecting Viruses

P. Qiu, R. Kormelink, Jinguang Yang, 2017, Front. Microbiol..

Rice Stripe Tenuivirus Has a Greater Tendency To Use the Prime-and-Realign Mechanism in Transcription of Genomic than in Transcription of Antigenomic Template RNAs

P. Qiu, Zu-jian Wu, Guohui Xie, 2017, Journal of Virology.

Inherent properties not conserved in other tenuiviruses increase priming and realignment cycles during transcription of Rice stripe virus.

P. Qiu, R. Kormelink, Songbai Zhang, 2016, Virology.

Metformin Protects Neurons against Oxygen-Glucose Deprivation/Reoxygenation -Induced Injury by Down-Regulating MAD2B

Yue Hu, P. Qiu, Chun Zhang, 2016, Cellular Physiology and Biochemistry.

Biological activities of thymosin ß4 defined by active sites in short peptide sequences

P. Qiu, A. Goldstein, M. Wheater, 2010, FASEB journal : official publication of the Federation of American Societies for Experimental Biology.

[IRE_FINDER-computational search of iron response element in human and mouse UTRs].

Luquan Wang, P. Qiu, J. Greene, 2002, Sheng wu hua xue yu sheng wu wu li xue bao Acta biochimica et biophysica Sinica.

Differential regulation of transcription termination occurring at two different sites on the μ–δ gene complex

Jianzhu Chen, P. Qiu, M. Kim, 1999 .

Thymosin β4 and corneal wound healing: visions of the future

P. Qiu, H. Matthew, M. Kurpakus-Wheater, 2010, Annals of the New York Academy of Sciences.

Abstract 698: Functional Analysis of Smad3 Deficiency in VSMCs Derived From Crispr/cas9-modified Human Induced Pluripotent Stem Cells

Bo Yang, P. Qiu, Jian Gong, 2018 .

Computational approaches for deciphering the transcriptional regulatory network by promoter analysis

P. Qiu, 2003 .

Impact of Antibodies and Strain Polymorphisms on Cytomegalovirus Entry and Spread in Fibroblasts and Epithelial Cells

L. Kauvar, Fengsheng Li, P. Qiu, 2017, Journal of Virology.

Association of a Polymorphism in the Indoleamine-2,3-Dioxygenase Gene and Interferon-α-Induced Depression in Patients with Chronic Hepatitis C

M. Epstein, J. Albrecht, P. Qiu, 2011, Molecular Psychiatry.

Carcinogenic metalloid arsenic induces expression of mdig oncogene through JNK and STAT3 activation.

P. Qiu, Yongju Lu, Hongwen Zhao, 2014, Cancer letters.

Evaluation of Varicella‐zoster virus‐specific cell‐mediated immunity by interferon‐γ Enzyme‐Linked Immunosorbent Assay in adults ≥50 years of age administered a herpes zoster vaccine

Ping Yang, P. Qiu, Chunlai Jiang, 2019, Journal of medical virology.

Reactive oxygen species contribute to arsenic-induced EZH2 phosphorylation in human bronchial epithelial cells and lung cancer cells.

P. Qiu, Qingshan Chang, Yongju Lu, 2014, Toxicology and applied pharmacology.

Thymosin β4: a potential novel dry eye therapy

P. Qiu, S. Dunn, D. Crockford, 2012, Annals of the New York Academy of Sciences.

Thymosin β‐4 and the Eye

P. Qiu, G. Sosne, M. Kurpakus‐Wheater, 2007 .

Thymosin β‐4 and the Eye

P. Qiu, G. Sosne, M. Kurpakus‐Wheater, 2007, Annals of the New York Academy of Sciences.

Genetic variation in IL28B predicts hepatitis C treatment-induced viral clearance

Jacques Fellay, David B. Goldstein, Kevin V. Shianna, 2009, Nature.

A novel synthesis of aurones: Their in vitro anticancer activity against breast cancer cell lines and effect on cell cycle, apoptosis and mitochondrial membrane potential

P. Qiu, Xiaodong Qi, Hai Chen, 2014 .

Thymosin beta 4: A novel corneal wound healing and anti-inflammatory agent

P. Qiu, G. Sosne, M. Kurpakus‐Wheater, 2007, Clinical ophthalmology.

Next Generation Sequencing (NGS)-Repeatability, Reproducibility and accuracy of commercially available Cancer Panels

M. Marton, P. Qiu, John Kang, 2021 .

Validation of Next Generation Sequencing Cancer Panels for Clinical Somatic Mutation Profiling-- Identification of Source of Variations and Artifacts using FFPE Tissues

M. Marton, P. Qiu, John Kang, 2014 .

Thymosin beta 4 suppression of corneal NFkappaB: a potential anti-inflammatory pathway.

P. Qiu, M. Wheater, P. Christopherson, 2007, Experimental eye research.

Correlation between LSP 1 polymorphisms and the susceptibility to breast cancer

P. Qiu, Xiaodong Qi, Hai Chen, 2015 .

Matrix metalloproteinase activity is necessary for thymosin beta 4 promotion of epithelial cell migration

P. Qiu, G. Sosne, M. Kurpakus‐Wheater, 2007, Journal of cellular physiology.

Analysis of boceprevir resistance associated amino acid variants (RAVs) in two phase 3 boceprevir clinical studies.

D. Hazuda, J. Albrecht, X. Tong, 2013, Virology.

ITPA gene variants protect against anaemia in patients treated for chronic hepatitis C

Jacques Fellay, David B. Goldstein, Kevin V. Shianna, 2010, Nature.

A new bioinformatic insight into the associated proteins in psychiatric disorders

P. Qiu, Xiaoqian Hong, Wenlong Zhao, 2016, SpringerPlus.

Long noncoding RNAs involve in resistance to Verticillium dahliae, a fungal disease in cotton

Maojun Wang, Lili Tu, Lin Zhang, 2017, Plant biotechnology journal.

Comparative promoter analysis and its application in analysis of PTH-regulated gene expression.

Luquan Wang, Ling Qin, Luquan Wang, 2003, Journal of molecular biology.

Pre-Analytical Considerations for Successful Next-Generation Sequencing (NGS): Challenges and Opportunities for Formalin-Fixed and Paraffin-Embedded Tumor Tissue (FFPE) Samples

M. Marton, A. Albright, P. Qiu, 2016, International journal of molecular sciences.

Yes‐Associated Protein Inhibits Transcription of Myocardin and Attenuates Differentiation of Vascular Smooth Muscle Cell from Cardiovascular Progenitor Cell Lineage

Jiao Jiao, Y. E. Chen, P. Qiu, 2017, Stem cells.

Title: Yes-associated protein inhibits transcription of myocardin and attenuates differentiation of vascular smooth muscle cell from cardiovascular progenitor cell lineage Running Title: YAP attenuates differentiation of VSMCs from CVPCs

Jiao Jiao, Y. E. Chen, P. Qiu, 2016 .

Antiproliferation and apoptosis induced by tamoxifen in human bile duct carcinoma QBC939 cells via upregulated p53 expression.

P. Qiu, Hua-liang Li, Qing-Xi Chen, 2009, Biochemical and biophysical research communications.

Domain-oriented functional analysis based on expression profiling

Luquan Wang, Wei Ding, P. Qiu, 2002, BMC Genomics.

A reference database for tumor-related genes co-expressed with interleukin-8 using genome-scale in silico analysis

Luquan Wang, P. Qiu, J. Greene, 2002, BMC Genomics.

Identification of Variable and Joining Germline Genes and Alleles for Rhesus Macaque from B Cell Receptor Repertoires

Huanming Yang, Jian Wang, Xiao Liu, 2019, Journal of Immunology.

Identification of Variable and Joining germline genes and alleles for Rhesus macaque from B-cell receptor repertoires

Huanming Yang, Jian Wang, Xiao Liu, 2018, bioRxiv.

Analysis of HCV resistance mutations during combination therapy with protease inhibitor boceprevir and PEG-IFN alpha-2b using TaqMan mismatch amplification mutation assay.

X. Tong, P. Qiu, S. Curry, 2008, Journal of virological methods.

Impact of naturally occurring variants of HCV protease on the binding of different classes of protease inhibitors.

X. Tong, P. Qiu, Zhuyan Guo, 2006, Biochemistry.

Resistance-Associated Amino Acid Variants Associated with Boceprevir plus Pegylated Interferon-α2B and Ribavirin in Patients with Chronic Hepatitis C in the Sprint-1 Trial

D. Hazuda, E. Schiff, J. Albrecht, 2013, Antiviral therapy.

Antiviral Activity and Resistance Analysis of NS3/4A Protease Inhibitor Grazoprevir and NS5A Inhibitor Elbasvir in Hepatitis C Virus GT4 Replicons

D. Nickle, E. Asante-Appiah, P. Qiu, 2017, Antimicrobial Agents and Chemotherapy.

Development and Validation of a Template-Independent Next-Generation Sequencing Assay for Detecting Low-Level Resistance-Associated Variants of Hepatitis C Virus.

M. Marton, M. Kibukawa, P. Qiu, 2016, The Journal of molecular diagnostics : JMD.

Hepatitis C virus whole genome position weight matrix and robust primer design

Luquan Wang, Xiao-Yan Cai, Luquan Wang, 2002, BMC Microbiology.

Tracing the origin and evolution history of methylation-related genes in plants

Maojun Wang, Lili Tu, Chao Shen, 2019, BMC Plant Biology.

Dynamic changes in chromatin acetylation and the expression of histone acetyltransferases and histone deacetylases regulate the SM22alpha transcription in response to Smad3-mediated TGFbeta1 signaling.

Raquel P. Ritchie, P. Qiu, Li Li, 2006, Biochemical and biophysical research communications.

hiPSC Modeling of Lineage-Specific Smooth Muscle Cell Defects Caused by TGFBR1A230T Variant, and Its Therapeutic Implications for Loeys-Dietz Syndrome

Y. E. Chen, Dong Zhou, P. Qiu, 2021, Circulation.

Analysis of the ERK1,2 transcriptome in mammary epithelial cells.

F. Gheyas, Luquan Wang, Wei Ding, 2004, The Biochemical journal.

Gene Expression Profiles and Transcription Factors Involved in Parathyroid Hormone Signaling in Osteoblasts Revealed by Microarray and Bioinformatics*

Luquan Wang, P. Tolias, P. Qiu, 2003, Journal of Biological Chemistry.

Computational analysis of composite regulatory elements

Luquan Wang, Luquan Wang, Wei Ding, 2002, Mammalian Genome.

Quantification of single nucleotide polymorphisms by automated DNA sequencing.

Luquan Wang, Xiao-Yan Cai, Luquan Wang, 2003, Biochemical and biophysical research communications.

Role of CD152 genetic polymorphisms in the susceptibility to breast cancer

P. Qiu, Xuefeng Bai, Xiaodong Qi, 2017, Oncotarget.

Involvement of AMPK in regulating the degradation of MAD2B under high glucose in neuronal cells

P. Qiu, Man Li, Yue Hu, 2016, Journal of cellular and molecular medicine.

Identification and characterization of single-nucleotide polymorphisms in MCH-R1 and MCH-R2.

B. Hawes, K. O'neill, P. Qiu, 2004, Obesity research.

Sequence variation in NPC1L1 and association with improved LDL-cholesterol lowering in response to ezetimibe treatment.

E. Schadt, S. Monks, A. Sachs, 2005, Genomics.

Frequencies of Resistance-Associated Amino Acid Variants Following Combination Treatment with Boceprevir Plus PEGINTRON (PegInterferon Alfa-2b)/Ribavir in in Patients With Chronic Hepatitis C (CHC), Genotype 1 (G1)

E. Schiff, J. Albrecht, X. Tong, 2010 .

Identification of single-nucleotide polymorphisms of the human neurokinin 1 receptor gene and pharmacological characterization of a Y192H variant

J. Lachowicz, P. Qiu, J. Simon, 2004, The Pharmacogenomics Journal.

Induced pluripotent stem cells with NOTCH1 gene mutation show impaired differentiation into smooth muscle and endothelial cells: Implications for bicuspid aortic valve‐related aortopathy

Jiao Jiao, P. Qiu, W. Tian, 2018, The Journal of thoracic and cardiovascular surgery.

Reference genome sequences of two cultivated allotetraploid cottons, Gossypium hirsutum and Gossypium barbadense

Hongkun Zheng, Guoliang Li, Maojun Wang, 2018, Nature Genetics.

Measuring Tumor Mutational Burden (TMB) in Plasma from mCRPC Patients Using Two Commercial NGS Assays

M. Marton, P. Qiu, O. Laterza, 2019, Scientific Reports.

Identification and Characterization of a Novel RF-amide Peptide Ligand for Orphan G-protein-coupled Receptor SP9155*

F. Monsma, Luquan Wang, P. Qiu, 2003, Journal of Biological Chemistry.

P518/Qrfp sequence polymorphisms in SAMP6 osteopenic mouse.

F. Monsma, P. Qiu, J. Greene, 2007, Genomics.

Myocardin Enhances Smad3-Mediated Transforming Growth Factor-β1 Signaling in a CArG Box-Independent Manner: Smad-Binding Element Is an Important cis Element for SM22α Transcription In Vivo

Raquel P. Ritchie, Da-Zhi Wang, P. Qiu, 2005, Circulation research.

Rice grassy stunt virus p5 interacts with two protein components of the plant-specific CBL–CIPK Ca+2 signaling network of rice

P. Qiu, Zu-jian Wu, Xiaojuan Liu, 2017, Virus Genes.

HCV Genotyping from NGS Short Reads and Its Application in Genotype Detection from HCV Mixed Infected Plasma

M. Marton, J. Klappenbach, P. Qiu, 2015, PloS one.

The association study on the polymorphisms of estrogen receptor α and β genes and systemic lupus erythematosus in Chinese Han cohort of Yunnan Province

P. Qiu, Xiaolan Li, Wenru Tang, 2015 .

Long noncoding RNAs involve in resistance to Verticillium dahliae, a fungal disease in cotton

Maojun Wang, Lili Tu, Lin Zhang, 2017, Plant biotechnology journal.

428 Genomic instability metric concordance between oncoscan™, cytosnp and an fda-approved HRD test

M. Marton, R. Cristescu, P. Qiu, 2020 .

Analysis of a human brain transcriptome map

Luquan Wang, Luquan Wang, P. Qiu, 2002, BMC Genomics.

Tracing the origin and evolution history of methylation-related genes in plants

Maojun Wang, Lili Tu, Chao Shen, 2019, BMC Plant Biology.

Clinical resistance to vicriviroc through adaptive V3 loop mutations in HIV-1 subtype D gp120 that alter interactions with the N-terminus and ECL2 of CCR5.

J. Howe, P. Qiu, R. Ralston, 2010, Virology.

Recombinant expression of Chlamydia trachomatis major outer membrane protein in E. Coli outer membrane as a substrate for vaccine research

Amy S. Espeseth, P. Qiu, P. Khandelwal, 2016, BMC Microbiology.

Validation of next-generation sequencing cancer panels for clinical somatic mutation profilin: Identification of source of variations and artifacts using FFPE tissues.

M. Marton, P. Qiu, John Kang, 2014 .

Deposited in DRO : 01 February 2019 Version of attached le : Peer-review status of attached

Zhu, Ye, Wang, 2019 .

Thymosin β4 inhibits TNF‐α‐induced NF‐κB activation, IL‐8 expression, and the sensitizing effects by its partners PINCH‐1 and ILK

P. Qiu, Yue Qiu, M. Wheater, 2011, FASEB journal : official publication of the Federation of American Societies for Experimental Biology.

Analysis of HCV resistance mutations during combination therapy with protease inhibitor boceprevir and PEG-IFN alpha-2b using TaqMan mismatch amplification mutation assay.

X. Tong, P. Qiu, S. Curry, 2008, Journal of virological methods.