E. Merkley

发表

Dynameomics: a comprehensive database of protein dynamics.

R Dustin Schaeffer, David A C Beck, Valerie Daggett, 2010, Structure.

Distance restraints from crosslinking mass spectrometry: Mining a molecular dynamics simulation database to evaluate lysine–lysine distances

Steven J. Rysavy, V. Daggett, A. Kahraman, 2014, Protein science : a publication of the Protein Society.

Defending Our Public Biological Databases as a Global Critical Infrastructure

Christina L. Ting, Corey M. Hudson, N. Generous, 2019, Front. Bioeng. Biotechnol..

Protein abundances can distinguish between naturally-occurring and laboratory strains of Yersinia pestis, the causative agent of plague

Landon H. Sego, P. Keim, J. Adkins, 2017, PloS one.

The succinated proteome.

Richard D. Smith, T. Metz, E. Merkley, 2014, Mass spectrometry reviews.

Proteomic signatures differentiating Bacillus anthracis Sterne sporulation on soil relative to laboratory media.

M. G. Warner, E. Merkley, D. Wunschel, 2017, The Analyst.

Uniformly 15N-Labeled Recombinant Ricin A-chain as an Internal Retention Time Standard for Increased Confidence in Forensic Identification of Ricin by Untargeted Nanoflow Liquid Chromatography-Tandem Mass Spectrometry.

Sarah C. Jenson, E. Merkley, Lindsey N. Anderson, 2019, Analytical chemistry.

Ricin‐like proteins from the castor plant do not influence liquid chromatography‐mass spectrometry detection of ricin in forensically relevant samples

Sarah C. Jenson, E. Merkley, Owen P. Leiser, 2017, Toxicon : official journal of the International Society on Toxinology.

Effects of bacterial inactivation methods on downstream proteomic analysis.

E. Merkley, B. Clowers, H. Kreuzer, 2015, Journal of microbiological methods.

Temperature dependence of the flexibility of thermophilic and mesophilic flavoenzymes of the nitroreductase fold.

V. Daggett, W. W. Parson, E. Merkley, 2010, Protein engineering, design & selection : PEDS.

Mutations in Global Regulators Lead to Metabolic Selection during Adaptation to Complex Environments

Y. Shamoo, L. Nakhleh, E. Merkley, 2014, PLoS genetics.

Detection and identification of heme c-modified peptides by histidine affinity chromatography, high-performance liquid chromatography-mass spectrometry, and database searching.

Matthew E Monroe, Liang Shi, Eric D Merkley, 2012, Journal of proteome research.

Conformational changes below the Tm: molecular dynamics studies of the thermal pretransition of ribonuclease A.

Valerie Daggett, Brady Bernard, Eric D Merkley, 2008, Biochemistry.

Apparent molar volumes and apparent molar heat capacities of aqueous phenol and sodium phenolate at temperatures from 278.15 to 393.15 K and at the pressure 0.35 MPa

E. Merkley, K. Ballerat-Busserolles, J. Price, 2003 .

Apparent molar volumes and apparent molar heat capacities of aqueous nickel(II) nitrate, copper(II) nitrate, and zinc(II) nitrate at temperatures from (278.15 to 393.15) K at the pressure 0.35 MPa

E. Merkley, E. M. Woolley, B. Brown, 2004 .

Flying blind, or just flying under the radar? The underappreciated power of de novo methods of mass spectrometric peptide identification

Eric D Merkley, Isabelle O'Bryon, Sarah C Jenson, 2020, Protein science : a publication of the Protein Society.

Applications and challenges of forensic proteomics.

Kristin H. Jarman, Karen L Wahl, Eric D Merkley, 2019, Forensic science international.

Proteomics Goes to Court: A Statistical Foundation for Forensic Toxin/Organism Identification Using Bottom-Up Proteomics.

Kristin H. Jarman, Samuel H. Payne, Natalie C. Heller, 2018, Journal of proteome research.

Changes in protein expression across laboratory and field experiments in Geobacter bemidjiensis.

Joseph N. Brown, Richard D. Smith, Cindy J. Castelle, 2015, Journal of proteome research.

Cross-linking and mass spectrometry methodologies to facilitate structural biology: finding a path through the maze

J. Adkins, J. Cort, E. Merkley, 2013, Journal of Structural and Functional Genomics.

Mixed-Isotope Labeling with LC-IMS-MS for Characterization of Protein–Protein Interactions by Chemical Cross-Linking

Meagan C. Burnet, Yehia M. Ibrahim, Kevin L. Crowell, 2013, Journal of The American Society for Mass Spectrometry.

Uncovering Hidden Members and Functions of the Soil Microbiome Using De Novo Metaproteomics

Hugh D. Mitchell, Meagan C. Burnet, Kristin E. Burnum-Johnson, 2018, bioRxiv.

Identification and Characterization of MtoA: A Decaheme c-Type Cytochrome of the Neutrophilic Fe(II)-Oxidizing Bacterium Sideroxydans lithotrophicus ES-1

M. Lipton, D. Richardson, E. Merkley, 2012, Front. Microbio..

The probabilistic limit of detection for ricin identification using a shotgun proteomics assay.

Kristin H. Jarman, Natalie C. Heller, Sarah C. Jenson, 2019, Analytical chemistry.

Uncovering Hidden Members and Functions of the Soil Microbiome Using De Novo Metaproteomics

Hugh D. Mitchell, Meagan C. Burnet, Carrie D. Nicora, 2018, bioRxiv.

Constructing a Tandem Mass Spectral Library for Forensic Ricin Identification.

Isabelle O'Bryon, Abigail E Tucker, Brooke L D Kaiser, 2019, Journal of proteome research.

A temperature‐dependent conformational change of NADH oxidase from Thermus thermophilus HB8

V. Daggett, W. W. Parson, E. Merkley, 2012, Proteins.

A Proteomics Tutorial

Helen Kreuzer, Helen W. Kreuzer, Eric D. Merkley, 2019, ACS Symposium Series.

Introduction to Forensic Proteomics

Eric D. Merkley, E. Merkley, 2019, ACS Symposium Series.

The Statistical Defensibility of Forensic Proteomics

Kristin H. Jarman, Kristin H. Jarman, Eric D. Merkley, 2019, ACS Symposium Series.

Proteomics for Microbial Forensics

E. Merkley, 2019, ACS Symposium Series.

Perspective on Improving Environmental Monitoring of Biothreats

Robin Holland, Shashi Sharma, Kevin Anderson, 2018, Front. Bioeng. Biotechnol..

Live cell chemical profiling of temporal redox dynamics in a photoautotrophic cyanobacterium.

Natalie C. Sadler, Richard D. Smith, A. Konopka, 2014, ACS chemical biology.

Bayesian Inference for Integrating Yarrowia lipolytica Multiomics Datasets with Metabolic Modeling.

Meagan C. Burnet, Peter C. St. John, Jeremy D. Zucker, 2021, ACS synthetic biology.

Identification of c-type heme-containing peptides using nonactivated immobilized metal affinity chromatography resin enrichment and higher-energy collisional dissociation.

Ronald J. Moore, Richard D. Smith, M. Monroe, 2011, Analytical chemistry.

Investigation of Yersinia pestis Laboratory Adaptation through a Combined Genomics and Proteomics Approach

J. Foster, P. Keim, E. Merkley, 2015, PloS one.

Distance restraints from crosslinking mass spectrometry: Mining a molecular dynamics simulation database to evaluate lysine–lysine distances

Steven J. Rysavy, V. Daggett, A. Kahraman, 2014, Protein science : a publication of the Protein Society.

Changes in protein expression across laboratory and field experiments in Geobacter bemidjiensis.

Joseph N. Brown, Richard D. Smith, B. Anderson, 2015, Journal of proteome research.

Proteomics of natural bacterial isolates powered by deep learning-based de novo identification.

Meagan C. Burnet, Sarah C. Jenson, Anil K. Shukla, 2018 .