T. Ha-Duong

发表

Coarse-grained models of the proteins backbone conformational dynamics.

T. Ha-Duong, 2014, Advances in experimental medicine and biology.

Protein Backbone Dynamics Simulations Using Coarse-Grained Bonded Potentials and Simplified Hydrogen Bonds.

Tap Ha-Duong, T. Ha-Duong, 2010, Journal of chemical theory and computation.

Cetuximab directly inhibits P-glycoprotein function in vitro independently of EGFR binding.

T. Ha-Duong, J. Bénard, R. Farinotti, 2015, European journal of pharmaceutical sciences : official journal of the European Federation for Pharmaceutical Sciences.

Interaction of chemokine receptor CXCR4 in monomeric and dimeric state with its endogenous ligand CXCL12: coarse-grained simulations identify differences

Pasquale Cutolo, T. Ha-Duong, F. Bachelerie, 2017, Journal of biomolecular structure & dynamics.

Structural ensemble and biological activity of DciA intrinsically disordered region.

T. Ha-Duong, D. Durand, S. Quevillon-Cheruel, 2020, Journal of structural biology.

Des3PI: a fragment-based approach to design cyclic peptides targeting protein–protein interactions

T. Ha-Duong, Maxence Delaunay, 2022, Journal of Computer-Aided Molecular Design.

PEGylated isoprenaline reveals distinct functions of cardiac β -adrenergic receptors located in the T-tubule vs . outer surface membrane

T. Ha-Duong, R. Fischmeister, N. Tsapis, 2022 .

Distinct functions of cardiac β-adrenergic receptors in the T-tubule vs. outer surface membrane

T. Ha-Duong, R. Fischmeister, C. Llorens-Cortes, 2021, bioRxiv.

The use of 4,4,4-trifluorothreonine to stabilize extended peptide structures and mimic β-strands

T. Ha-Duong, O. Lequin, B. Crousse, 2017, Beilstein journal of organic chemistry.

Structure-activity relationships of β-hairpin mimics as modulators of amyloid β-peptide aggregation.

T. Ha-Duong, C. van Heijenoort, M. Taverna, 2018, European journal of medicinal chemistry.

GDP-Mannose Pyrophosphorylase: A Biologically Validated Target for Drug Development Against Leishmaniasis

T. Ha-Duong, P. Loiseau, C. Cavé, 2019, Front. Cell. Infect. Microbiol..

Biochemical analysis of leishmanial and human GDP-Mannose Pyrophosphorylases and selection of inhibitors as new leads

H. van Tilbeurgh, T. Ha-Duong, N. Lazar, 2017, Scientific Reports.

Molecular Dynamics Simulations Combined with Nuclear Magnetic Resonance and/or Small-Angle X-ray Scattering Data for Characterizing Intrinsically Disordered Protein Conformational Ensembles

Dominique Durand, Maud Chan-Yao-Chong, Tâp Ha-Duong, 2019, J. Chem. Inf. Model..

Structure of ring-shaped Aβ42 oligomers determined by conformational selection

C. Prévost, T. Ha-Duong, Linh Tran, 2016, Scientific Reports.

Exploring the Alzheimer amyloid-β peptide conformational ensemble: A review of molecular dynamics approaches

T. Ha-Duong, Linh Tran, 2015, Peptides.

Investigation into Early Steps of Actin Recognition by the Intrinsically Disordered N-WASP Domain V

T. Ha-Duong, D. Durand, Maud Chan-Yao-Chong, 2019, International journal of molecular sciences.

Structural Characterization of N-WASP Domain V Using MD Simulations with NMR and SAXS Data.

T. Ha-Duong, C. van Heijenoort, D. Durand, 2019, Biophysical journal.

Conformational Ensemble and Biological Role of the TCTP Intrinsically Disordered Region: Influence of Calcium and Phosphorylation.

T. Ha-Duong, E. Lescop, F. Malard, 2018, Journal of molecular biology.

The stathmin-derived I19L peptide interacts with FtsZ and alters its bundling.

T. Ha-Duong, P. Curmi, P. Savarin, 2009, Biochemistry.

Flexibility of the B-DNA backbone: effects of local and neighbouring sequences on pyrimidine-purine steps.

T Ha-Duong, H. Bertrand, B. Hartmann, 1998, Nucleic acids research.

Phosphorylation controls the interaction of the connexin43 C-terminal domain with tubulin and microtubules.

T. Ha-Duong, D. Pastré, P. Curmi, 2012, Biochemistry.

Supramolecular Organization of Polymer Prodrug Nanoparticles Revealed by Coarse-Grained Simulations.

T. Ha-Duong, J. Nicolas, Pingting Gao, 2021, Journal of the American Chemical Society.

Comparative study of structural models of Leishmania donovani and human GDP-mannose pyrophosphorylases.

T. Ha-Duong, P. Loiseau, C. Cavé, 2016, European journal of medicinal chemistry.

A semi‐implicit solvent model for the simulation of peptides and proteins

Daniel Borgis, Nathalie Basdevant, Tap Ha-Duong, 2004, J. Comput. Chem..

Modeling Protein-Protein Recognition in Solution Using the Coarse-Grained Force Field SCORPION.

Daniel Borgis, Nathalie Basdevant, Tap Ha-Duong, 2013, Journal of chemical theory and computation.

Effect of Post-Translational Amidation on Islet Amyloid Polypeptide Conformational Ensemble: Implications for Its Aggregation Early Steps

T. Ha-Duong, Linh Tran, 2016, International journal of molecular sciences.

Binding Modes of a Glycopeptidomimetic Molecule on Aβ Protofibrils: Implication for Its Inhibition Mechanism.

T. Ha-Duong, J. Kaffy, S. Ongeri, 2018, ACS chemical neuroscience.

Introduction of constrained Trp analogs in RW9 modulates structure and partition in membrane models.

T. Ha-Duong, A. Carotenuto, M. Hindié, 2023, Bioorganic chemistry.

Computational design of cyclic peptides to inhibit protein-peptide interactions.

T. Ha-Duong, Maxence Delaunay, 2023, Biophysical chemistry.

Proteolytically Stable Diaza-Peptide Foldamers Mimic Helical Hot Spots of Protein-Protein Interactions and Act as Natural Chaperones.

T. Ha-Duong, L. Ciccone, J. Gallard, 2023, Journal of Medicinal Chemistry.

Influence of GTP/GDP and magnesium ion on the solvated structure of the protein FtsZ: a molecular dynamics study

T. Ha-Duong, C. Jamous, Nathalie Basdevant, 2014, Journal of biomolecular structure & dynamics.

Understanding Passive Membrane Permeation of Peptides: Physical Models and Sampling Methods Compared

T. Ha-Duong, L. Mazzanti, 2023, International Journal of Molecular Sciences.

Molecular Dynamics Simulations Combined with Nuclear Magnetic Resonance and/or Small-Angle X-ray Scattering Data for Characterizing Intrinsically Disordered Protein Conformational Ensembles

T. Ha-Duong, D. Durand, M. Chan-Yao-Chong, 2019, J. Chem. Inf. Model..