Haw Yang

发表

Illuminating the mechanistic roles of enzyme conformational dynamics

J. Chu, J. Brokaw, J. A. Hanson, 2007, Proceedings of the National Academy of Sciences.

Progress in single-molecule tracking spectroscopy

Haw Yang, Hu Cang, Haw Yang, 2008 .

Detection of Velocity and Diffusion Coefficient Change Points in Single-Particle Trajectories.

Shuhui Yin, Haw Yang, Haw Yang, 2017, Biophysical journal.

Protein Conformational Dynamics Probed by Single-Molecule Electron Transfer

X. Xie, S. Cova, Haw Yang, 2003, Science.

Multiscale complex network of protein conformational fluctuations in single-molecule time series

Chun-Biu Li, T. Komatsuzaki, Haw Yang, 2008, Proceedings of the National Academy of Sciences.

Detection of intensity change points in time-resolved single-molecule measurements.

Lucas P. Watkins, Haw Yang, 2005, The journal of physical chemistry. B.

Probing Bond Activation Reactions with Femtosecond Infrared

Haw Yang, C. Harris, 2001 .

Ultrafast Infrared Studies of Bond Activation in Organometallic Complexes

Haw Yang, C. Harris, K. Kotz, 1999 .

DNA looping can enhance lysogenic CI transcription in phage lambda

Haw Yang, Haw Yang, L. M. Anderson, 2008, Proceedings of the National Academy of Sciences.

Theory And Evaluation Of Single-molecule Signals

M. Orrit, E. Barkai, Haw Yang, 2008 .

Single quantum dots as local temperature markers.

Kai Zhang, Liwei Lin, Haw Yang, 2007, Nano letters.

Quantum dot nano thermometers reveal heterogeneous local thermogenesis in living cells.

Liwei Lin, Haw Yang, Liwei Lin, 2011, ACS nano.

Theory for controlling individual self-propelled micro-swimmers by photon nudging I: directed transport.

Frank Cichos, Haw Yang, Andreas P Bregulla, 2018, Physical chemistry chemical physics : PCCP.

Active particles bound by information flows

Frank Cichos, Viktor Holubec, Haw Yang, 2018, Nature Communications.

Stochastic localization of microswimmers by photon nudging.

Frank Cichos, Haw Yang, Andreas P Bregulla, 2014, ACS nano.

Mechanodelivery of nanoparticles to the cytoplasm of living cells.

Haw Yang, Ilona U. Rafalska-Metcalf, C. Hsia, 2014, Nanoscale.

Nano-plasmonics and electronics co-integration in CMOS enabling a pill-sized multiplexed fluorescence microarray system.

Kaushik Sengupta, Hao Li, Haw Yang, 2018, Biomedical optics express.

Guiding a confocal microscope by single fluorescent nanoparticles.

Haw Yang, Hu Cang, Haw Yang, 2007, Optics letters.

Expectation-maximization of the potential of mean force and diffusion coefficient in Langevin dynamics from single molecule FRET data photon by photon.

Haw Yang, Jhih-Wei Chu, J. Chu, 2013, The journal of physical chemistry. B.

Trajectory Entropy of Continuous Stochastic Processes at Equilibrium.

Haw Yang, Jhih-Wei Chu, J. Chu, 2014, The journal of physical chemistry letters.

Detection and characterization of dynamical heterogeneity in an event series using wavelet correlation.

Haw Yang, Haw Yang, 2008, The Journal of chemical physics.

Thermogenesis detection of single living cells via quantum dots

Liwei Lin, Haw Yang, Jui-Ming Yang, 2010, 2010 IEEE 23rd International Conference on Micro Electro Mechanical Systems (MEMS).

Bipolar cellular morphology of malignant melanoma in unstained human melanoma skin tissue.

Haw Yang, Kai Zhang, Chia-Yi Yang, 2009, Journal of biomedical optics.

Rapid and Quantitative Sizing of Nanoparticles Using Three-Dimensional Single-Particle Tracking

Haw Yang, Hu Cang, Haw Yang, 2007 .

Determining the Spheroid Geometry of Individual Metallic Nanoparticles by Two-Dimensional Single-Particle Dynamic Light Scattering

Haw Yang, T. Muir, L. F. Guerra, 2019, The Journal of Physical Chemistry C.

Real-Time 3D Single-Particle Tracking Spectroscopy for Cellular Dynamics

Haw Yang, 2009 .

Numerical construction of estimators for single-molecule fluorescence measurements.

H. Mootz, T. Komatsuzaki, C. Landes, 2013, The journal of physical chemistry. B.

Molecular complex between lithium and formaldehyde: An ab Initio molecular orbital study

Haw Yang, T. Su, Y. Liau, 1995 .

MEMS Temperature Characterization by CdSe Quantum Dots

Liwei Lin, Haw Yang, Kai Zhang, 2007, TRANSDUCERS 2007 - 2007 International Solid-State Sensors, Actuators and Microsystems Conference.

Single-particle Dynamic Light Scattering: Shapes of Individual Nanoparticles.

Haw Yang, T. Muir, L. F. Guerra, 2019, Nano letters.

Amplifying Intermolecular Events by Streptavidin-Induced Proximity.

Haw Yang, Hao Li, Tao Liu, 2022, Journal of the American Chemical Society.

Single quantum dots for probing local environments

Haw Yang, 2009 .

Engagement of arginine finger to ATP triggers large conformational changes in NtrC1 AAA+ ATPase for remodeling bacterial RNA polymerase.

S. De Carlo, J. A. Hanson, Haw Yang, 2010, Structure.

Multicolor multifocal 3D microscopy using in-situ optimization of a spatial light modulator

M. J. Amin, Haw Yang, T. Zhao, 2022, Scientific Reports.

Localization precision in chromatic multifocal imaging

M. J. Amin, Sabine Petry, J. Shaevitz, 2020, 2008.10488.

Continuous distribution of emission states from single CdSe/ZnS quantum dots.

A. Alivisatos, Haw Yang, Hauyee Chang, 2006, Nano letters.

The Mechanism of a C-H Bond Activation Reaction in Room-Temperature Alkane Solution

J. Yeston, Haw Yang, T. Lian, 1997 .

Photobleaching statistics in single-molecule on-/off-time distributions.

Haw Yang, Hao Li, Tao Liu, 2019, The Journal of chemical physics.

Ultrafast Infrared Studies of Ligand Rearrangement at Coordinatively Unsaturated Transition Metal Centers

Haw Yang, P. Snee, C. Harris, 2000 .

Induvidually tunable Micromachines driven by laser induced self propelled thermophoresis

Haw Yang, F. Cichos, A. Bregulla, 2013 .

Sorting Nanoparticles by Valency with DNA Barcoding.

Haw Yang, Nyssa T Emerson, 2022, Journal of the American Chemical Society.

Compound Molecular Logic in Accessing the Active Site of Mycobacterium tuberculosis Protein Tyrosine Phosphatase B.

J. Chu, Haw Yang, Ilona U. Rafalska-Metcalf, 2018, Journal of the American Chemical Society.

Parabolic Potential Surfaces Localize Charge Carriers in Nonblinking Long-Lifetime "Giant" Colloidal Quantum Dots.

M. Tien, Haw Yang, R. Klie, 2022, Nano letters.

Plasmonics, Tracking and Manipulating, and Living Cells: general discussion.

M. Dahan, J. Michaelis, M. Orrit, 2015, Faraday discussions.

Femtosecond infrared studies of ligand rearrangement reactions: silyl hydride products from Group 6 carbonyls

Haw Yang, P. Snee, C. Harris, 2000 .

Reaction Mechanism of Silicon−Hydrogen Bond Activation Studied Using Femtosecond to Nanosecond IR Spectroscopy and Ab Initio Methods

Haw Yang, C. Harris, K. Kotz, 1998 .

FEMTOSECOND INFRARED STUDIES OF SILANE SILICON-HYDROGEN BOND ACTIVATION

Haw Yang, C. Harris, K. Kotz, 1997 .

Femtosecond Infrared Studies of the Dissociation and Dynamics of Transition Metal Carbonyls in Solution

Haw Yang, T. Lian, C. Harris, 1996 .

A simplified model for lysogenic regulation through DNA looping

Haw Yang, L. M. Anderson, 2008, 2008 30th Annual International Conference of the IEEE Engineering in Medicine and Biology Society.

Optically Active Sum Frequency Generation Microscopy For Cell Imaging

Haw Yang, Y. Shen, Kai Zhang, 2006 .

Theory for controlling individual self-propelled micro-swimmers by photon nudging II: confinement.

Frank Cichos, Haw Yang, Markus Selmke, 2018, Physical chemistry chemical physics : PCCP.

Harnessing thermal fluctuations for purposeful activities: the manipulation of single micro-swimmers by adaptive photon nudging

Frank Cichos, Haw Yang, Bian Qian, 2013 .

FAD Is a Preferred Substrate and an Inhibitor ofEscherichia coli General NAD(P)H:Flavin Oxidoreductase*

X. Xie, Haw Yang, L. Xun, 2002, The Journal of Biological Chemistry.

Multi-resolution 3D visualization of the early stages of cellular uptake of peptide-coated nanoparticles.

Haw Yang, Kevin Welsher, Haw Yang, 2014, Nature nanotechnology.

Fully Integrated Fluorescence Biosensors On-Chip Employing Multi-Functional Nanoplasmonic Optical Structures in CMOS

Kaushik Sengupta, Haw Yang, Hao Li, 2017, IEEE Journal of Solid-State Circuits.

Structure-mechanics statistical learning unravels the linkage between local rigidity and global flexibility in nucleic acids†

Jhih-Wei Chu, Yi-Tsao Chen, Haw Yang, 2020, Chemical science.

Origin Remodeling and Opening in Bacteria Rely on Distinct Assembly States of the DnaA Initiator

J. Berger, M. Mott, N. J. Crisona, 2010, The Journal of Biological Chemistry.

Multiparameter fluorescence spectroscopy of single quantum dot-dye FRET hybrids.

Haw Yang, Haw Yang, C. Hayden, 2007, Journal of the American Chemical Society.

Quantitative single-molecule conformational distributions: a case study with poly-(L-proline).

Haw Yang, Hauyee Chang, Lucas P. Watkins, 2006, The journal of physical chemistry. A.

Seeing the forest for the trees: fluorescence studies of single enzymes in the context of ensemble experiments.

Yan-Wen Tan, Haw Yang, 2011, Physical chemistry chemical physics : PCCP.

Three-dimensional super line-localization in low signal-to-noise microscope images via prior-apprised unsupervised learning (PAUL)

Shuhui Yin, M. Junaid Amin, Nyssa T. Emerson, 2020, Optical Engineering + Applications.

Prior-Apprised Unsupervised Learning of Subpixel Curvilinear Features in Low Signal/Noise Images.

Haw Yang, Shuhui Yin, Ming Tien, 2020, Biophysical journal.

Change‐Point Localization and Wavelet Spectral Analysis of Single‐Molecule Time Series

Haw Yang, 2011 .

Dynamic active-site protection by the M. tuberculosis protein tyrosine phosphatase PtpB lid domain.

T. Alber, J. A. Hanson, Haw Yang, 2010, Journal of the American Chemical Society.

Mechanical couplings of protein backbone and side chains exhibit scale-free network properties and specific hotspots for function

J. Chu, Haw Yang, T. Click, 2021, Computational and structural biotechnology journal.

Structure-mechanics statistical learning uncovers mechanical relay in proteins

J. Chu, Haw Yang, T. Click, 2022, Chemical science.

Direct Mg 2 (cid:1) Binding Activates Adenylate Kinase from Escherichia coli * □ S

J. A. Hanson, Haw Yang, Yanyan Tan, 2020 .

Intermediary conformations linked to the directionality of the aminoacylation pathway of nonribosomal peptide synthetases

H. Mootz, Haw Yang, Wieland Steinchen, 2021, RSC chemical biology.

An accessible approach to preparing water-soluble Mn2+-doped (CdSSe)ZnS (core)shell nanocrystals for ratiometric temperature sensing.

Haw Yang, C. Hsia, Anna Wuttig, 2011, ACS nano.

Sub-millisecond Translational and Orientational Dynamics of a Freely Moving Single Nanoprobe.

Haw Yang, J. Beckwith, Joseph S. Beckwith, 2021, The journal of physical chemistry. B.

Femtosecond IR Studies of Alkane C-H Bond Activation by Organometallic Compounds

Haw Yang, T. Lian, C. Harris, 1996, Ultrafast Phenomena.

FRET monitoring of a nonribosomal peptide synthetase.

H. Mootz, T. Komatsuzaki, Haw Yang, 2017, Nature chemical biology.

Leveraging lifetime information to perform real-time 3D single-particle tracking in noisy environments.

M. J. Amin, M. Tien, Haw Yang, 2021, The Journal of chemical physics.

Direct Mg2+ Binding Activates Adenylate Kinase from Escherichia coli*

J. A. Hanson, Haw Yang, Yan Tan, 2009, Journal of Biological Chemistry.

Quantitative in vitro biochemistry, one molecule at a time

J. A. Hanson, Haw Yang, 2012 .

Discovery of protein- and DNA-imperceptible nanoparticle hard coating using gel-based reaction tuning.

Shuhui Yin, Haw Yang, Kevin Welsher, 2015, Journal of the American Chemical Society.

Quantitative evaluation of cross correlation between two finite-length time series with applications to single-molecule FRET.

Haw Yang, Haw Yang, Jeffery A Hanson, 2008, The journal of physical chemistry. B.

Imaging the behavior of molecules in biological systems: breaking the 3D speed barrier with 3D multi-resolution microscopy.

Haw Yang, Kevin Welsher, Haw Yang, 2015, Faraday discussions.

Integrated Angle-Insensitive Nanoplasmonic Filters for Ultraminiaturized Fluorescence Microarray in a 65 nm Digital CMOS Process

Kaushik Sengupta, Hao Li, Haw Yang, 2018, ACS Photonics.

Information bounds and optimal analysis of dynamic single molecule measurements.

Haw Yang, Lucas P. Watkins, Haw Yang, 2004, Biophysical journal.

Probing single-molecule dynamics photon by photon

Haw Yang, X. Xie, Haw Yang, 2002 .

Statistical approaches for probing single-molecule dynamics photon-by-photon

X. Xie, Haw Yang, X. Xie, 2002 .

Progress in single-molecule spectroscopy in cells.

Haw Yang, 2010, Current opinion in chemical biology.

An Ingestible Pill With CMOS Fluorescence Sensor Array, Bi-Directional Wireless Interface and Packaged Optics for in-Vivo Bio-Molecular Sensing

K. Sengupta, Haw Yang, Chengjie Zhu, 2023, IEEE Transactions on Biomedical Circuits and Systems.

Kinetics profiling of gramicidin S synthetase A, a member of nonribosomal peptide synthetases.

H. Mootz, Haw Yang, Hao Li, 2014, Biochemistry.

Observation of spectral anisotropy of gold nanoparticles.

Haw Yang, Hu Cang, Haw Yang, 2008, The Journal of chemical physics.

Statistical Learning of Discrete States in Time Series.

Haw Yang, Hao Li, Haw Yang, 2018, The journal of physical chemistry. B.

Identifying the structural and kinetic elements in protein large-amplitude conformational motions

J. Chu, Haw Yang, 2017 .

A versatile optical microscope for time-dependent single-molecule and single-particle spectroscopy.

Haw Yang, Hao Li, 2018, The Journal of chemical physics.

Discrete nanostructures of quantum dots/Au with DNA.

A Paul Alivisatos, Haw Yang, Hauyee Chang, 2004, Journal of the American Chemical Society.

Single-molecule biophysics : experiment and theory

Masaru Kawakami, Tamiki Komatsuzaki, Haw Yang, 2011 .

Ultrafast infrared studies of chemical reaction dynamics in room-temperature liquids

Haw Yang, 1999 .

Confocal three dimensional tracking of a single nanoparticle with concurrent spectroscopic readouts

Haw Yang, Hu Cang, Chung M. Wong, 2006 .

"Plug-and-go" strategy to manipulate streptavidin valencies.

Haw Yang, D. Montiel, Hao Li, 2014, Bioconjugate chemistry.

Extraction of Protein Conformational Modes from Distance Distributions Using Structurally Imputed Bayesian Data Augmentation.

Haw Yang, Xun Sun, Thomas E Morrell, 2016, The journal of physical chemistry. B.

Analysis of trajectory entropy for continuous stochastic processes at equilibrium.

Haw Yang, Jhih-Wei Chu, J. Chu, 2014, The journal of physical chemistry. B.

Fisher information metric for the Langevin equation and least informative models of continuous stochastic dynamics.

Haw Yang, Jhih-Wei Chu, J. Chu, 2013, The Journal of chemical physics.

Reproducibly Measuring Plasmon-Enhanced Fluorescence in Bulk Solution Across a 20-Fold Range of Optical Densities.

Haw Yang, Nyssa T Emerson, 2021, Analytical chemistry.

Parallelization of Change Point Detection.

Haw Yang, Haw Yang, Nancy Song, 2017, The journal of physical chemistry. A.

Model-free analysis of time-dependent single-molecule spectroscopy: Dynamics of biological macromolecules

Haw Yang, Kevin Welsher, Haw Yang, 2012, 2012 9th IEEE International Symposium on Biomedical Imaging (ISBI).

Structural distributions from single-molecule measurements as a tool for molecular mechanics.

J. Chu, J. Brokaw, J. A. Hanson, 2012, Chemical physics.

Intensity uniformity optimization in spatial-light-modulator-based multifocal microscope

Joshua W. Shaevitz, M. Junaid Amin, Haw Yang, 2021, BiOS.

Uniform intensity in multifocal microscopy using a spatial light modulator

Joshua W Shaevitz, Haw Yang, Sabine Petry, 2019, PloS one.

Single-particle light scattering: imaging and dynamical fluctuations in the polarization and spectral response.

Haw Yang, Haw Yang, 2007, The journal of physical chemistry. A.

Observation of Correlated Emission Intensity and Polarization Fluctuations in Single CdSe/ZnS Quantum Dots†

Haw Yang, Haw Yang, D. Montiel, 2008, The journal of physical chemistry. A.

Ligand synthesis and passivation for silver and large gold nanoparticles for single-particle-based sensing and spectroscopy.

Haw Yang, E. J. Sorensen, Li Sun, 2013, Methods in molecular biology.

Analysis of large-amplitude conformational transition dynamics in proteins at the single-molecule level

Haw Yang, Haw Yang, 2011 .

Time-Dependent Spectroscopy of a Nanoparticle Freely Moving in 3D

Haw Yang, 2007 .

Information bounds in determining the 3D orientation of a single emitter or scatterer using point-detector-based division-of-amplitude polarimetry.

Haw Yang, J. Beckwith, Joseph S. Beckwith, 2021, The Journal of chemical physics.

Real-time chemical imaging of bacterial activity in biofilms using open-channel microfluidics and synchrotron FTIR spectromicroscopy.

Haw Yang, H. Holman, E. Wozei, 2009, Analytical chemistry.

Quantitative characterization of changes in dynamical behavior for single-particle tracking studies.

Haw Yang, H. Cang, D. Montiel, 2006, Journal of Physical Chemistry B.

A general statistical test for correlations in a finite-length time series.

Haw Yang, Haw Yang, Jeffery A Hanson, 2008, The Journal of chemical physics.

Three-dimensional chiral imaging by sum-frequency generation.

Haw Yang, Y. Shen, Kai Zhang, 2006, Journal of the American Chemical Society.

Photon-by-photon determination of emission bursts from diffusing single chromophores.

Kai Zhang, Haw Yang, Haw Yang, 2005, The journal of physical chemistry. B.

The trajectory patterns of single HIV-1 virus-like particle in live CD4 cells: A real time three-dimensional multi-resolution microscopy study using encapsulated nonblinking giant quantum dot.

Haw Yang, Shuhui Yin, Szu-Wei Huang, 2022, Journal of microbiology, immunology, and infection = Wei mian yu gan ran za zhi.

Confocal single-molecule FRET for protein conformational dynamics.

Yan-Wen Tan, J. Chu, J. A. Hanson, 2014, Methods in molecular biology.

Model-free statistical reduction of single-molecule time series

Haw Yang, 2008 .

Fisher information metric for the Langevin equation and least informative models of continuous stochastic dynamics.

J. Chu, Haw Yang, K. Haas, 2013, The Journal of chemical physics.