D. Dibrova

发表

Modeling of interaction between cytochrome c and the WD domains of Apaf-1: bifurcated salt bridges underlying apoptosome assembly

Michael Y. Galperin, D. Shalaeva, D. Dibrova, 2015, Biology Direct.

Origin of first cells at terrestrial, anoxic geothermal fields

Michael Y. Galperin, E. Koonin, D. Dibrova, 2012, Proceedings of the National Academy of Sciences.

Phylogenomic reconstruction of archaeal fatty acid metabolism.

Michael Y. Galperin, D. Dibrova, A. Mulkidjanian, 2014, Environmental microbiology.

Common mechanism of activated catalysis in P-loop fold nucleoside triphosphatases - in varietate concordia

D. Shalaeva, D. Dibrova, A. Mulkidjanian, 2022, bioRxiv.

Patterns of hydrolysis initiation in P-loop fold nucleoside triphosphatases - united in diversity

D. Shalaeva, D. Dibrova, A. Mulkidjanian, 2022, bioRxiv.

Common patterns of hydrolysis initiation in P-loop fold nucleoside triphosphatases

D. Shalaeva, D. Dibrova, A. Mulkidjanian, 2022, bioRxiv.

Common mechanism of activated catalysis in P-loop fold nucleoside triphosphatases – united in diversity

D. Shalaeva, D. Dibrova, A. Mulkidjanian, 2022, bioRxiv.

Comparative analysis of lipid biosynthesis in archaea, bacteria and eukaryotes: What was the structure of the first membrane lipids?

Michael Y. Galperin, E. Koonin, K. Makarova, 2012 .

Common Patterns of Hydrolysis Initiation in P-loop Fold Nucleoside Triphosphatases

D. Shalaeva, D. Dibrova, A. Mulkidjanian, 2022, Biomolecules.

Common Mechanism of Activated Catalysis in P-loop Fold Nucleoside Triphosphatases—United in Diversity

D. Shalaeva, D. Dibrova, A. Mulkidjanian, 2022, Biomolecules.

Open Questions on the Origin of Life at Anoxic Geothermal Fields

Michael Y. Galperin, E. Koonin, D. Dibrova, 2012, Origins of Life and Evolution of Biospheres.

COGcollator: a web server for analysis of distant relationships between homologous protein families

Vadim V. Perekhvatov, Konstantin V. Skulachev, D. Dibrova, 2017, Biology Direct.

Evolution of cytochrome bc complexes: from membrane-anchored dehydrogenases of ancient bacteria to triggers of apoptosis in vertebrates.

Michael Y. Galperin, D. Dibrova, A. Mulkidjanian, 2013, Biochimica et biophysica acta.

Expansion of the “Sodium World” through Evolutionary Time and Taxonomic Space

D. Shalaeva, D. Dibrova, A. Mulkidjanian, 2020, Biochemistry (Moscow).

The Role of Energy in the Emergence of Biology from Chemistry

Michael Y. Galperin, E. Koonin, D. Dibrova, 2012, Origins of Life and Evolution of Biospheres.

Emergence of cytochrome bc complexes in the context of photosynthesis

Michael Y. Galperin, D. Shalaeva, D. Dibrova, 2017, Physiologia plantarum.

Phylogenomic analysis of the type I NADH:quinone-oxidoreductase

D. Dibrova, A. Mulkidjanian, G. E. Novakovsky, 2016 .

Phylogenomic analysis of type 1 NADH:Quinone oxidoreductase

D. Dibrova, A. Mulkidjanian, G. E. Novakovsky, 2016, Biochemistry (Moscow).

Phylogenomic analysis identifies a sodium-translocating decarboxylating oxidoreductase in thermotogae

D. Dibrova, A. Mulkidjanian, O. I. Klimchuk, 2016, Biochemistry (Moscow).

Ancient systems of sodium/potassium homeostasis as predecessors of membrane bioenergetics

Michael Y. Galperin, E. Koonin, D. Dibrova, 2015, Biochemistry (Moscow).

The cytochrome bc1 complex and the evolution of membrane bioenergetics

Michael Y. Galperin, D. Dibrova, A. Mulkidjanian, 2012 .

P 1 The cytochrome bc 1 complex and the evolution of membrane bioenergetics

Michael Y. Galperin, D. Dibrova, A. Mulkidjanian, 2012 .

Characterization of the N-ATPase, a distinct, laterally transferred Na+-translocating form of the bacterial F-type membrane ATPase

Michael Y. Galperin, Armen Y. Mulkidjanian, Daria V. Dibrova, 2010, Bioinform..

Regulation of Cell Proliferation and Nrf2-Mediated Antioxidant Defense: Conservation of Keap1 Cysteines and Nrf2 Binding Site in the Context of the Evolution of KLHL Family

D. Dibrova, G. Shilovsky, 2023, Life.

Ancient systems of sodium/potassium homeostasis as predecessors of membrane bioenergetics

Michael Y. Galperin, E. Koonin, D. Dibrova, 2015, Biochemistry (Moscow).

Analysis of the interactions between GMF and Arp2/3 complex in two binding sites by molecular dynamics simulation.

D. Dibrova, A. Popinako, O. Sokolova, 2018, Biochemical and biophysical research communications.

COGcollator: a web server for analysis of distant relationships between homologous protein families

Vadim V. Perekhvatov, Konstantin V. Skulachev, D. Dibrova, 2017, Biology Direct.

The role of Tyr102 residue in the functioning of bacterial NAD+-dependent formate dehydrogenase of Pseudomonas sp. 101.

V. V. Khrustalev, D. Dibrova, K. Boyko, 2022, Biochemical and biophysical research communications.

COGNAT: a web server for comparative analysis of genomic neighborhoods

Vadim V. Perekhvatov, Konstantin V. Skulachev, D. Dibrova, 2017, Biology Direct.

Identification of branched-chain amino acid aminotransferases active towards (R)-(+)-1-phenylethylamine among PLP fold type IV transaminases.

D. Dibrova, E. Y. Bezsudnova, V. Popov, 2018, Journal of biotechnology.

COGNAT: a web server for comparative analysis of genomic neighborhoods

Armen Y. Mulkidjanian, Daria V. Dibrova, Kirill A. Konovalov, 2017, Biology Direct.