S. Degnan

发表

Ontogenetic Changes in the Bacterial Symbiont Community of the Tropical Demosponge Amphimedon queenslandica: Metamorphosis Is a New Beginning

Rebecca A. Fieth, Marie E. A. Gauthier, J. Bayes, 2016, Front. Mar. Sci..

Differential expression of neuropeptides correlates with growth rate in cultivated Haliotis asinina (Vetigastropoda: Mollusca)

B. Degnan, S. Degnan, P. S. York, 2012 .

Functionalization of a protosynaptic gene expression network

D. Bassett, B. Degnan, K. Kosik, 2012, Proceedings of the National Academy of Sciences.

The crown-of-thorns starfish genome as a guide for biocontrol of this coral reef pest

Selene L. Fernandez-Valverde, B. Degnan, Min Zhao, 2017, Nature.

The Amphimedon queenslandica genome and the evolution of animal complexity

Todd H. Oakley, Nicholas H. Putnam, G. Richards, 2010, Nature.

Co-expression of synaptic genes in the sponge Amphimedon queenslandica uncovers ancient neural submodules

B. Degnan, S. Degnan, V. Anggono, 2019, Scientific Reports.

Sensory Flask Cells in Sponge Larvae Regulate Metamorphosis via Calcium Signaling.

B. Degnan, S. Degnan, Nagayasu Nakanishi, 2015, Integrative and Comparative Biology.

Molecular and behavioural evidence that interdependent photo ‐ and chemosensory systems regulate larval settlement in a marine sponge

S. Degnan, Tahsha E. Say, 2019, Molecular ecology.

Arginine Biosynthesis by a Bacterial Symbiont Enables Nitric Oxide Production and Facilitates Larval Settlement in the Marine-Sponge Host

S. Degnan, Hao Song, Olivia H. Hewitt, 2020, Current Biology.

Bacterial symbionts in animal development: arginine biosynthesis complementation enables larval settlement in a marine sponge

S. Degnan, Hao Song, Olivia H. Hewitt, 2020, bioRxiv.

Isolation of amphimedon developmental material.

G. Richards, B. Degnan, S. Degnan, 2008, CSH protocols.

Remarkable Consistency of Larval Release in the Spermcast-Mating Demosponge Amphimedon queenslandica (Hooper and van Soest)

B. Degnan, S. Degnan, A. Calcino, 2010 .

Origin of the Animal Circadian Clock: Diurnal and Light-Entrained Gene Expression in the Sponge Amphimedon queenslandica

B. Degnan, S. Degnan, A. Reitzel, 2017, Front. Mar. Sci..

The NK Homeobox Gene Cluster Predates the Origin of Hox Genes

B. Degnan, D. Rokhsar, S. Degnan, 2007, Current Biology.

Genomic insights into the marine sponge microbiome

Sandie M. Degnan, Jörn Piel, M. W. Taylor, 2012, Nature Reviews Microbiology.

The first identification of complete Eph-ephrin signalling in ctenophores and sponges reveals a role for neofunctionalization in the emergence of signalling domains

B. Degnan, S. Degnan, Arunkumar Krishnan, 2019, BMC Evolutionary Biology.

Pluripotency and the origin of animal multicellularity

Selene L. Fernandez-Valverde, B. Degnan, S. Degnan, 2019, Nature.

Pluripotency and the origin of animal multicellularity

Selene L. Fernandez-Valverde, B. Degnan, S. Degnan, 2019, bioRxiv.

Origin and Evolution of the Sponge Aggregation Factor Gene Family

B. Degnan, Marie E. A. Gauthier, S. Degnan, 2017, Molecular biology and evolution.

Seasonal changes in environmental nutrient availability and biomass composition in a coral reef sponge

B. Degnan, J. Krömer, S. Degnan, 2017 .

Convergent evolution of a vertebrate-like methylome in a marine sponge

B. Degnan, R. Lister, O. Bogdanović, 2019, Nature Ecology & Evolution.

Marked changes in neuropeptide expression accompany broadcast spawnings in the gastropod Haliotis asinina

B. Degnan, B. Woodcroft, S. Degnan, 2012, Frontiers in Zoology.

Phototransduction in a marine sponge provides insights into the origin of animal vision

B. Degnan, S. Degnan, V. Anggono, 2022, iScience.

Carry‐over effect of larval settlement cue on postlarval gene expression in the marine gastropod Haliotis asinina

S. Degnan, E. Williams, 2009, Molecular ecology.

Nitric oxide is not a negative regulator of metamorphic induction in the abalone Haliotis asinina

S. Degnan, N. Ueda, 2014, Front. Mar. Sci..

Units of management in biological conservation

Liana N. Joseph, S. Degnan, P. Baverstock, 1994 .

Crown-of-thorns starfish in captivity experience sustained large-scale changes in gene expression

B. Degnan, D. Craik, S. Degnan, 2022, bioRxiv.

Induction of metamorphosis with potassium ions requires development of competence and an anterior signalling centre in the ascidian Herdmania momus

B. Degnan, S. Degnan, D. Souter, 1997, Development Genes and Evolution.

Variation in rates of early development in Haliotis asinina generate competent larvae of different ages

B. Degnan, S. Degnan, D. Jackson, 2012, Frontiers in Zoology.

Distribution and diversity of ROS-generating enzymes across the animal kingdom, with a focus on sponges (Porifera)

S. Degnan, Olivia H. Hewitt, 2022, BMC Biology.

The Demosponge Amphimedon queenslandica: Reconstructing the Ancestral Metazoan Genome and Deciphering the Origin of Animal Multicellularity.

G. Richards, B. Degnan, S. Degnan, 2008, CSH protocols.

Genotyping individual amphimedon embryos, larvae, and adults.

B. Degnan, S. Degnan, Alina Craigie, 2008, CSH protocols.

Muscle-specific regulation of tropomyosin gene expression and myofibrillogenesis differs among muscle systems examined at metamorphosis of the gastropod Haliotis rufescens

B. Degnan, S. Degnan, D. Morse, 1997, Development Genes and Evolution.

Seasonal changes in environmental nutrient availability and biomass composition in a coral reef sponge

B. Degnan, J. Krömer, S. Degnan, 2017, Marine Biology.

Expression of a Scr/Hox5 gene in the larval central nervous system of the gastropod Haliotis, a non‐segmented spiralian lophotrochozoan

V. Hinman, B. Degnan, S. Degnan, 2000, Evolution & development.

Sex-specific expression of pheromones and other signals in gravid starfish

B. Degnan, D. Craik, S. Degnan, 2022, BMC biology.

Ribosomal RNA-Depletion Provides an Efficient Method for Successful Dual RNA-Seq Expression Profiling of a Marine Sponge Holobiont

B. Degnan, S. Degnan, Xueyan Xiang, 2022, Marine Biotechnology.

Phototransduction in a marine sponge provides insights into the origin of animal vision

B. Degnan, S. Degnan, V. Anggono, 2022, iScience.

Draft Genomes Shed Light on the Dual Bacterial Symbiosis that Dominates the Microbiome of the Coral Reef Sponge Amphimedon queenslandica

Marie E. A. Gauthier, S. Degnan, J. Watson, 2016, Front. Mar. Sci..

Identification of Genes Differentially Expressed in the Ganglia of Growing Haliotis asinina

B. Degnan, B. Woodcroft, S. Degnan, 2010 .

The initiation of metamorphosis as an ancient polyphenic trait and its role in metazoan life-cycle evolution

B. Degnan, S. Degnan, 2010, Philosophical Transactions of the Royal Society B: Biological Sciences.

Genetic consequences of sequential founder events by an island-colonizing bird

Arnaud Estoup, Jiro Kikkawa, Sandie M. Degnan, 2002, Proceedings of the National Academy of Sciences of the United States of America.

A Mox homeobox gene in the gastropod mollusc Haliotis rufescens is differentially expressed during larval morphogenesis and metamorphosis

B. Degnan, S. Degnan, D. Morse, 1997, FEBS letters.

Wnt and TGF-β Expression in the Sponge Amphimedon queenslandica and the Origin of Metazoan Embryonic Patterning

B. Degnan, K. Green, S. Degnan, 2007, PloS one.

Identifying the germline in an equally cleaving mollusc: Vasa and Nanos expression during embryonic and larval development of the vetigastropod Haliotis asinina.

B. Degnan, S. Degnan, B. Norris, 2010, Journal of experimental zoology. Part B, Molecular and developmental evolution.

Gene activation of metazoan Fox transcription factors at the onset of metamorphosis in the marine demosponge Amphimedon queenslandica

B. Degnan, S. Degnan, Huifang Yuan, 2022, Development, growth & differentiation.

A unique horizontal gene transfer event has provided the octocoral mitochondrial genome with an active mismatch repair gene that has potential for an unusual self-contained function

S. Degnan, Jaret P. Bilewitch, 2011, BMC Evolutionary Biology.

Evolution of RNA-binding proteins in animals: insights from genome-wide analysis in the sponge Amphimedon queenslandica.

B. Degnan, S. Degnan, Pierre Kerner, 2011, Molecular biology and evolution.

Widespread transcriptional changes pre‐empt the critical pelagic–benthic transition in the vetigastropod Haliotis asinina

B. Degnan, B. Woodcroft, S. Degnan, 2009, Molecular ecology.

Distal regulation, silencers, and a shared combinatorial syntax are hallmarks of animal embryogenesis

B. Degnan, S. Degnan, Emily S. Wong, 2021, bioRxiv.

The ets multigene family is conserved throughout the Metazoa.

B. Degnan, S. Degnan, D. Morse, 1993, Nucleic acids research.

The effect of larval age on morphology and gene expression during ascidian metamorphosis.

B. Degnan, K. Green, S. Degnan, 2006, Integrative and comparative biology.

The surprisingly complex immune gene repertoire of a simple sponge, exemplified by the NLR genes: a capacity for specificity?

S. Degnan, 2015, Developmental and comparative immunology.

Lipidomics of the sea sponge Amphimedon queenslandica and implication for biomarker geochemistry

B. Degnan, J. Krömer, S. Degnan, 2017, Geobiology.

Heritability estimates for growth in the tropical abalone Haliotis asinina using microsatellites to assign parentage

B. Degnan, S. Degnan, T. Lucas, 2006 .

Comparative Morphological Analysis of the Immature Stages of the Grass Blue Butterflies Zizeeria and Zizina (Lepidoptera: Lycaenidae)

B. Degnan, S. Degnan, R. Gurung, 2016, Zoological Science.

Transcriptome profiling of the demosponge Amphimedon queenslandica reveals genome-wide events that accompany major life cycle transitions

B. Degnan, K. Kosik, M. Arcila, 2012, BMC Genomics.

Interdependent photo- and chemosensory systems regulate larval settlement in a marine sponge

S. Degnan, Tahsha E. Say, 2019, bioRxiv.

Pleistocene isolation and recent gene flow in Haliotis asinina, an Indo‐Pacific vetigastropod with limited dispersal capacity

B. Degnan, B. Jeffrey, S. Degnan, 2006, Molecular ecology.

Marked changes in neuropeptide expression accompany broadcast spawnings in the gastropod Haliotis asinina

B. Degnan, B. Woodcroft, S. Degnan, 2012, Frontiers in Zoology.

Articulated Coralline Algae of the Genus Amphiroa Are Highly Effective Natural Inducers of Settlement in the Tropical Abalone Haliotis asinina

S. Degnan, Alice G. Yeates, E. Williams, 2008, The Biological Bulletin.

Antioxidant enzymes that target hydrogen peroxide are conserved across the animal kingdom, from sponges to mammals

S. Degnan, Olivia H. Hewitt, 2023, Scientific Reports.

Grand Challenges in Coevolution

David A. Baltrus, Jesse R. Zaneveld, S. Degnan, 2022, Frontiers in Ecology and Evolution.

MICROEVOLUTION IN ISLAND FORMS: THE ROLES OF DRIFT AND DIRECTIONAL SELECTION IN MORPHOLOGICAL DIVERGENCE OF A PASSERINE BIRD

I. Owens, A. Estoup, J. Kikkawa, 2002, Evolution; international journal of organic evolution.

Emerging patterns in the regulation and evolution of marine invertebrate settlement and metamorphosis

S. Degnan, A. Reitzel, Andreas Heyland, 2011 .

Genetic monogamy in the absence of paternity guards: the Capricorn silvereye, Zosterops lateralis chlorocephalus, on Heron Island

J. Kikkawa, C. Moritz, S. Degnan, 2001 .

GENETIC VARIABILITY AND POPULATION DIFFERENTIATION INFERRED FROM DNA FINGERPRINTING IN SILVEREYES (AVES: ZOSTEROPIDAE)

S. Degnan, 1993, Evolution; international journal of organic evolution.

A hox/hom homeobox gene in sponges.

B. Degnan, S. Degnan, D. Morse, 1995, Gene.

GENETIC VARIABILITY AND POPULATION DIFFERENTIATION INFERRED FROM DNA FINGERPRINTING IN SILVEREYES (AVES: ZOSTEROPIDAE)

S. Degnan, 1993, Evolution; international journal of organic evolution.

Evolutionary Distinctiveness and Status of the Endangered Lake Eacham Rainbowfish (Melanotaenia eachamensis)

C. Moritz, S. Degnan, Dan-Tong Zhu, 1998 .

Characterization of a GABAA receptor β subunit in the abalone Haliotis asinina that is upregulated during larval development

S. Degnan, S. Cummins, P. Sobhon, 2011 .

Nitric Oxide Acts as a Positive Regulator to Induce Metamorphosis of the Ascidian Herdmania momus

S. Degnan, N. Ueda, 2013, PloS one.

The Characterization of Sponge NLRs Provides Insight into the Origin and Evolution of This Innate Immune Gene Family in Animals

J. Bayes, S. Degnan, B. Yuen, 2013, Molecular biology and evolution.

Microsatellite Genotyping of Individual Abalone Larvae: Parentage Assignment in Aquaculture

B. Degnan, S. Degnan, M. Selvamani, 2001, Marine Biotechnology.

The perils of single gene trees — mitochondrial versus single‐copy nuclear DNA variation in white‐eyes (Aves: Zosteropidae)

S. Degnan, 1993 .

Phylogeography of mitochondrial DNA in two species of white-eyes in Australia

C. Moritz, S. Degnan, 1992 .

Staining and Tracking Methods for Studying Sponge Cell Dynamics.

B. Degnan, A. Le Bivic, S. Degnan, 2021, Methods in molecular biology.

The mid-developmental transition and the evolution of animal body plans

Leon Anavy, Itai Yanai, Oleg Simakov, 2016, Nature.

The origin of the pelagobenthic metazoan life cycle: what's sex got to do with it?

B. Degnan, S. Degnan, 2006, Integrative and comparative biology.

Determining the biomass composition of a sponge holobiont for flux analysis.

B. Degnan, J. Krömer, S. Degnan, 2014, Methods in molecular biology.

Evolution in temperate and tropical seas: disparate patterns in southern hemisphere abalone (Mollusca: Vetigastropoda: Haliotidae).

Imron, B. Degnan, S. Degnan, 2006, Molecular phylogenetics and evolution.

Analysis of the Biomass Composition of the Demosponge Amphimedon queenslandica on Heron Island Reef, Australia

B. Degnan, J. Krömer, S. Degnan, 2014, Marine drugs.

An ancient role for nitric oxide in regulating the animal pelagobenthic life cycle: evidence from a marine sponge

G. Richards, B. Degnan, R. Croll, 2016, Scientific Reports.

Captivity induces a sweeping and sustained genomic response in a starfish

B. Degnan, D. Craik, S. Degnan, 2023, Molecular ecology.

How larvae and life cycles evolve.

B. Degnan, S. Degnan, 2023, Trends in genetics : TIG.

Pluripotency and the origin of animal multicellularity

Selene L. Fernandez-Valverde, B. Degnan, S. Degnan, 2019, bioRxiv.

Microsatellite primers for studies of gene flow and mating systems in white-eyes (Zosterops).

C. Moritz, S. Degnan, B. Robertson, 1999, Molecular ecology.

Molecular and morphological systematics of the Ellisellidae (Coelenterata: Octocorallia): parallel evolution in a globally distributed family of octocorals.

S. Degnan, M. Ekins, J. Hooper, 2014, Molecular phylogenetics and evolution.

The first identification of complete Eph-ephrin signalling in ctenophores and sponges reveals a role for neofunctionalization in the emergence of signalling domains

B. Degnan, S. Degnan, Arunkumar Krishnan, 2019, BMC Evolutionary Biology.

Think laterally: horizontal gene transfer from symbiotic microbes may extend the phenotype of marine sessile hosts

S. Degnan, 2014, Front. Microbiol..

Potential for host-symbiont communication via neurotransmitters and neuromodulators in an aneural animal, the marine sponge Amphimedon queenslandica

B. Degnan, S. Degnan, Xueyan Xiang, 2023, Frontiers in neural circuits.

Transcriptome profiling of the demosponge Amphimedon queenslandica reveals genome-wide events that accompany major life cycle transitions

B. Degnan, K. Kosik, M. Arcila, 2012, BMC Genomics.

Widespread transcriptional changes pre‐empt the critical pelagic–benthic transition in the vetigastropod Haliotis asinina

B. Degnan, B. Woodcroft, S. Degnan, 2009, Molecular ecology.

Seasonal tissue-specific gene expression in wild crown-of-thorns starfish reveals reproductive and stress-related transcriptional systems

B. Degnan, D. Craik, S. Degnan, 2024, PLoS biology.

Seasonal tissue-specific gene expression reveals reproductive and stress-related transcriptional systems in wild crown-of-thorns starfish

B. Degnan, D. Craik, S. Degnan, 2023, bioRxiv.