Guohua Wang

发表

Predicting disease-related genes using integrated biomedical networks

Xuequn Shang, Jiajie Peng, Yadong Wang, 2017, BMC Genomics.

An approach for prioritizing disease-related microRNAs based on genomic data integration

Guohua Wang, Qinghua Jiang, Yadong Wang, 2010, 2010 3rd International Conference on Biomedical Engineering and Informatics.

Transcription factor and microRNA regulation in androgen-dependent and -independent prostate cancer cells

Jack Y. Yang, Yadong Wang, Weixing Feng, 2008, BMC Genomics.

Signal Transducers and Activators of Transcription-1 (STAT1) Regulates microRNA Transcription in Interferon γ-Stimulated HeLa Cells

Yadong Wang, Lang Li, Mingxiang Teng, 2010, PloS one.

Methods of MicroRNA Promoter Prediction and Transcription Factor Mediated Regulatory Network

F. Wang, Guohua Wang, Yuming Zhao, 2017, BioMed research international.

Potential roles of microRNAs in regulating long intergenic noncoding RNAs

Guohua Wang, Liran Juan, Milan Radovich, 2013, BMC Medical Genomics.

Q. Zou, Xiangxiang Zeng, Guohua Wang, 2015, Briefings in functional genomics.

Modeling Exon Expression Using Histone Modifications

Yadong Wang, Guohua Wang, Shijia Zhu, 2013, PloS one.

Identification of regulatory regions of bidirectional genes in cervical cancer

Mingxiang Teng, Guohua Wang, Liran Juan, 2013, BMC Medical Genomics.

RNA Polymerase II Binding Patterns Reveal Genomic Regions Involved in MicroRNA Gene Regulation

Kenneth P. Nephew, Guohua Wang, Changyu Shen, 2010, PloS one.

Identification of transcription factor and microRNA binding sites in responsible to fetal alcohol syndrome

Guohua Wang, Xin Wang, Jack Y. Yang, 2008, BMC Genomics.

AKT Alters Genome-Wide Estrogen Receptor α Binding and Impacts Estrogen Signaling in Breast Cancer

Myles A Brown, J. Carroll, Yunlong Liu, 2008, Molecular and Cellular Biology.

PI-3 K/AKT and ERK signaling pathways mediate leptin-induced inhibition of PPARγ gene expression in primary rat hepatic stellate cells

Guohua Wang, Jie Liu, Xin Wang, 2009, Molecular and Cellular Biochemistry.

Genome sequence assembly evaluation using long-range sequencing data

Shane A. McCarthy, R. Durbin, W. Chow, 2022, bioRxiv.

Reconstruct gene regulatory network using slice pattern model

Guohua Wang, Youping Deng, Jack Y. Yang, 2009, BMC Genomics.

Genome sequence assembly evaluation using long-range sequencing data

Shane A. McCarthy, R. Durbin, W. Chow, 2022, bioRxiv.

Identification of methylation states of DNA regions for Illumina methylation BeadChip

Guohua Wang, Yuming Zhao, Fang Wang, 2020, BMC Genomics.

Transcriptional regulation prediction of antiestrogen resistance in breast cancer based on RNA polymerase II binding data

Yadong Wang, Guohua Wang, Denan Zhang, 2014, BMC Bioinformatics.

DeepST: identifying spatial domains in spatial transcriptomics by deep learning

Pingping Wang, Qinghua Jiang, Guohua Wang, 2022, Nucleic acids research.

StackCirRNAPred: computational classification of long circRNA from other lncRNA based on stacking strategy

Guohua Wang, Xin Wang, Yadong Liu, 2022, BMC Bioinformatics.

BP4RNAseq: a babysitter package for retrospective and newly generated RNA-seq data analyses using both alignment-based and alignment-free quantification method

Lei Xu, Guohua Wang, Quan Zou, 2020, Bioinform..

miR2Disease: a manually curated database for microRNA deregulation in human disease

Yadong Wang, Yunlong Liu, Mingxiang Teng, 2008, Nucleic Acids Res..

A modulated empirical Bayes model for identifying topological and temporal estrogen receptor α regulatory networks in breast cancer

Yadong Wang, Yunlong Liu, Pearlly Yan, 2011, BMC Systems Biology.

A Clustering Ensemble Method for Cell Type Detection by Multiobjective Particle Optimization

Guohua Wang, Qiaoming Liu, Xudong Zhao, 2021, IEEE/ACM Transactions on Computational Biology and Bioinformatics.

Effects of DNA Methylation on TFs in Human Embryonic Stem Cells

Guohua Wang, Tianjiao Zhang, Shumei Zhang, 2021, Frontiers in Genetics.

Regenotyping structural variants through an accurate force-calling method

Yadong Wang, B. Liu, Guohua Wang, 2023, bioRxiv.

A deep learning approach for filtering structural variants in short read sequencing data

Guohua Wang, Yongzhuang Liu, Yadong Wang, 2020, Briefings Bioinform..

Estradiol-regulated microRNAs control estradiol response in breast cancer cells

Guohua Wang, Jason S. Carroll, Harikrishna Nakshatri, 2009, Nucleic acids research.

Predicting human microRNA-disease associations based on support vector machine

Yadong Wang, Guohua Wang, Tianjiao Zhang, 2010, 2010 IEEE International Conference on Bioinformatics and Biomedicine (BIBM).

Prioritization of disease microRNAs through a human phenome-microRNAome network

Yadong Wang, Yunlong Liu, Mingxiang Teng, 2010, BMC Systems Biology.

Model-based Comparative Prediction of Transcription-Factor Binding Motifs in Anabolic Responses in Bone

Yunlong Liu, Guohua Wang, Hiroki Yokota, 2008, Genom. Proteom. Bioinform..

The stacking strategy-based hybrid framework for identifying non-coding RNAs

Guohua Wang, Yang Yang, Xin Wang, 2021, Briefings Bioinform..

Continuous culture of urine-derived bladder cancer cells for precision medicine

Guohua Wang, Zengxia Li, R. Schlegel, 2019, Protein & Cell.

Identification of regulatory regions of bidirectional genes in cervical cancer

Yadong Wang, Yunlong Liu, Lang Li, 2013, BMC Medical Genomics.

Predicting disease-related genes using integrated biomedical networks

Xuequn Shang, Jiajie Peng, Yadong Wang, 2017, BMC Genomics.

A survey on computational methods in discovering protein inhibitors of SARS-CoV-2

Guohua Wang, J. Wan, Qiaoming Liu, 2021, Briefings Bioinform..

Evaluating disease similarity based on gene network reconstruction and representation

Guohua Wang, Yang Li, Keqi Wang, 2021, Bioinform..

Genome-wide prediction of cis-acting RNA elements regulating tissue-specific pre-mRNA alternative splicing

Guohua Wang, Weixing Feng, Milan Radovich, 2009, BMC Genomics.

Model-based prediction of cis-acting RNA elements regulating tissue-specific alternative splicing

Yunlong Liu, Xin Wang, Guohua Wang, 2008, 2008 8th IEEE International Conference on BioInformatics and BioEngineering.

Drug-target interaction predication via multi-channel graph neural networks

Guohua Wang, Yang Li, Ke-Qiang Wang, 2021, Briefings Bioinform..

Chromatin structure characteristics of pre-miRNA genomic sequences

Yadong Wang, Mingxiang Teng, Qinghua Jiang, 2011, BMC Genomics.

Alcohol exposure alters DNA methylation profiles in mouse embryos at early neurulation

Yunlong Liu, K. Nephew, Guohua Wang, 2009, Epigenetics.

Transcriptional regulation prediction of antiestrogen resistance in breast cancer based on RNA polymerase II binding data

Guohua Wang, Denan Zhang, Yadong Wang, 2014, BMC Bioinformatics.

SIDD: A Semantically Integrated Database towards a Global View of Human Disease

Guohua Wang, Peigang Xu, Liang Cheng, 2013, PloS one.

ReRF-Pred: predicting amyloidogenic regions of proteins based on their pseudo amino acid composition and tripeptide composition

Guohua Wang, Zhixia Teng, Yanjuan Li, 2021, BMC Bioinform..

i6mA-Vote: Cross-Species Identification of DNA N6-Methyladenine Sites in Plant Genomes Based on Ensemble Learning With Voting

Maozu Guo, Guohua Wang, Yanjuan Li, 2022, Frontiers in Plant Science.

Identifying Plant Pentatricopeptide Repeat Proteins Using a Variable Selection Method

Guohua Wang, Xudong Zhao, Hangyu Li, 2021, Frontiers in Plant Science.

Understanding Transcription Factor Regulation by Integrating Gene Expression and DNase I Hypersensitive Sites

Guohua Wang, Fang Wang, Yunlong Liu, 2015, BioMed research international.

Weighted Network-Based Inference of Human MicroRNA-Disease Associations

Yadong Wang, Guohua Wang, Tianjiao Zhang, 2010, 2010 Fifth International Conference on Frontier of Computer Science and Technology.

Bioinformatics Methods and Biological Interpretation for Next-Generation Sequencing Data

Weixing Feng, Yunlong Liu, Guohua Wang, 2015, BioMed research international.

Detection of transcription factors binding to methylated DNA by deep recurrent neural network

Guohua Wang, Yifeng Liu, Hao Lin, 2021, Briefings Bioinform..

miProBERT: identification of microRNA promoters based on the pre-trained model BERT

Guohua Wang, Xin Wang, Xin Gao, 2023, Briefings Bioinform..

Prioritization of disease microRNAs through a human phenome-microRNAome network

Yadong Wang, Mingxiang Teng, Qinghua Jiang, 2010, BMC Systems Biology.

CHTKC: a robust and efficient k-mer counting algorithm based on a lock-free chaining hash table

Jianan Wang, Su Chen, Lili Dong, 2020, Briefings Bioinform..

ECFS-DEA: an ensemble classifier-based feature selection for differential expression analysis on expression profiles

Guohua Wang, Shan Huang, Xudong Zhao, 2020, BMC Bioinformatics.

AFS-DEA: An automatic feature selection platform for differential expression analysis

Tong Liu, Guohua Wang, Xudong Zhao, 2020, 2020 IEEE International Conference on Bioinformatics and Biomedicine (BIBM).

xIP-seq Platform: An Integrative Framework for High-Throughput Sequencing Data Analysis

Mingxiang Teng, Xin Wang, Guohua Wang, 2009, 2009 Ohio Collaborative Conference on Bioinformatics.

BinMemPredict: a Web Server and Software for Predicting Membrane Protein Types

Yi Jiang, Yuming Zhao, Guohua Wang, 2013 .

Using RNase sequence specificity to refine the identification of RNA-protein binding regions

Guohua Wang, Xin Wang, Sean D Mooney, 2008, BMC Genomics.

Evaluating individual genome similarity with a topic model

Qi Yang, Yadong Wang, Liran Juan, 2020, Bioinform..

Efficient iterative Hi-C scaffolder based on N-best neighbors

Guohua Wang, Richard Durbin, Dengfeng Guan, 2021, BMC Bioinform..

Genome sequence assembly evaluation using long-range sequencing data

Shane A. McCarthy, R. Durbin, W. Chow, 2022, bioRxiv.

Guohua Wang, Ergude Bao, Shien Huang, 2021, Briefings Bioinform..

Control of EVI-1 oncogene expression in metastatic breast cancer cells through microRNA miR-22

S Badve, S. Hammond, Y. Liu, 2011, Oncogene.

HAlign: Fast multiple similar DNA/RNA sequence alignment based on the centre star strategy

Qinghua Hu, Guohua Wang, Maozu Guo, 2015, Bioinform..

Identification of Transcription Factor and microRNA Binding Sites from Array-derived Gene Expression Data

Yunlong Liu, Kenneth P. Nephew, Feng Zhou, 2007, International Conference on Bioinformatics & Computational Biology.

MicroRNA Promoter Identification in Human With a Three-level Prediction Method

Guohua Wang, Xin Wang, Jie Li, 2023, IEEE/ACM Transactions on Computational Biology and Bioinformatics.