S. Durani

发表

Electrostatics‐defying interaction between arginine termini as a thermodynamic driving force in protein–protein interaction

Abhijit R. Tendulkar, Susheel Durani, Deepa V. Pednekar, 2009, Proteins.

IDeAS: automated design tool for hetero-chiral protein folds

Abhijit R. Tendulkar, S. Durani, Vibin Ramakrishnan, 2018, Physical biology.

Examination of the Effect of N‐terminal Diproline and Charged Side Chains on the Stabilization of Helical Conformation in Alanine–based Short Peptides: A Molecular Dynamics Study

S. Durani, Bhupesh Goyal, K. R. Srivastava, 2016 .

A Stereochemically-Bent β-Hairpin: Scrutiny of Folding by Comparing a Heteropolypeptide and Cognate Oligoalanine

S. Durani, K. R. Srivastava, 2014 .

Aromatic interactions at atom-to-atom contact and just beyond: a case study of protein interactions of NAD⁺/NADP⁺.

S. Durani, Pooja Gupta, 2011, International journal of biological macromolecules.

Structure-activity relationship of estrogens: a study involving cyclofenyl as the model compound.

S. Durani, S. Garg, R. Bindal, 1983, Journal of steroid biochemistry.

A possible basis for structure function relationship of estrogens

S. Durani, N. Anand, 1981 .

Configurationally guided peptide conformational motifs: Crystal structure of a (LDLDDL alpha)-D-alpha-L-beta-D-beta-D-alpha-L-beta type hexapeptide fold

Pattabhi, F. Fabiola, S. Durani, 1997 .

Interactions of main chain in folding and self assembly of unfolded protein structure: Enquiries with a serine solubilized nonapeptide

S. Durani, K. R. Srivastava, 2014 .

Homochiral stereochemistry: the missing link of structure to energetics in protein folding.

S. Durani, Anilesh Kumar, Vibin Ramakrishnan, 2009, The journal of physical chemistry. B.

A mixed-alpha,beta miniprotein stereochemically reprogrammed to high-binding affinity for acetylcholine.

S. Durani, B. Kundu, Soumendra Rana, 2007, Biopolymers.

A RATIONALLY DESIGNED TURN-HELIX PEPTIDE

F. Fabiola, S. Durani, V. Pattabhi, 1999 .

Stable type II' reverse turn - 310 helix conformation of Boc-D-Glu-Ala-Gly-Lys-Ala-Leu-OMe in apolar solvents.

S. Durani, V. Bobde, S. Beri, 1993 .

Automated design evolution of stereochemically randomized protein foldamers

Anil Kumar, Vibin Ramakrishnan, Ranjit Ranbhor, 2018, Physical biology.

Exploring arylglyoxals as the arginine reactivity probes. A mechanistic investigation using the buffer and substituent effects

S. Durani, K. Baburaj, 1991 .

Conformational Preferences of Heterochiral Peptides. Crystal Structures of Heterochiral Peptides Boc-(D) Val-(D) Ala-Leu-Ala-OMe and Boc-Val-Ala-Leu-(D) Ala-OMe-Enhanced Stability of β-sheet Through C-H…O Hydrogen Bonds

S. Durani, V. Pattabhi, G. F. Fabiola, 2001, Journal of biomolecular structure & dynamics.

Protein homomers in point‐group assembly: Symmetry making and breaking are specific and distinctive in their codes of chemical alphabet in side chains

Deepa V. Pednekar, S. Durani, 2010, Proteins.

Structure-activity relationship of antiestrogens: a study using triarylbutenone, benzofuran, and triarylfuran analogues as models for triarylethylenes and triarylpropenones.

S. Durani, A. Saeed, D. Dikshit, 1989, Journal of medicinal chemistry.

Modification of constrained peptides by ring-closing metathesis reaction.

S. Durani, N. Sreenivasachary, S. Kotha, 2001, Bioorganic & medicinal chemistry letters.

Structure-activity relationship of antiestrogens. Effect of the side chain and its position on the activity of 2,3-diaryl-2H-1-benzopyrans.

S. Durani, A. Saeed, R. Kapil, 1990, Journal of medicinal chemistry.

Design of a Zinc-Finger Hydrolase with a Synthetic αββ Protein

S. Durani, K. R. Srivastava, 2014, PloS one.

Conformational effects of C(alpha,alpha)-dipropargylglycine as a constrained residue.

S. Durani, V. Pattabhi, S. Kotha, 2001, Biopolymers.

Stereospecific adduct ion formation in the chemical ionization mass spectra of E‐ and Z‐1,2,3‐triaryl‐2‐propen‐1‐ones

K. P. Madhusudanan, S. Durani, R. Kapil, 1985 .

A double catgrip mixed L and D mini protein only 20 residues long.

S. Durani, B. Kundu, Soumendra Rana, 2007, Bioorganic & medicinal chemistry.

Conformational effects of C?,?-dipropargylglycine as a constrained residue

S. Durani, V. Pattabhi, S. Kotha, 2001 .

Computational scrutiny of the effect of N-terminal proline and residue stereochemistry in the nucleation of α-helix fold

S. Durani, Anilesh Kumar, Bhupesh Goyal, 2016 .

Reactions of nucleophiles with triarylpropenones and triarylbutenones

K. P. Madhusudanan, S. Durani, R. Kapil, 1986 .

Fragmentation and rearrangement reactions in certain 1,2,3-triaryl-2-propen-1-ones following electron impact and chemical ionization†

K. P. Madhusudanan, S. Durani, R. Kapil, 1985 .

Metastable ion decomposition and collisional activation mass spectra of 1,2,3-triarylpropen-1-ones

K. P. Madhusudanan, S. Durani, Y. Itagaki, 1991 .

Protein design with L- and D-alpha-amino acid structures as the alphabet.

Susheel Durani, S. Durani, 2008, Accounts of chemical research.

Stereochemistry and solvent role in protein folding: nuclear magnetic resonance and molecular dynamics studies of poly-L and alternating-L,D homopolypeptides in dimethyl sulfoxide.

S. Durani, Anilesh Kumar, Bhupesh Goyal, 2011, The journal of physical chemistry. B.

Harnessing D-amino acids for peptide motif designs. Synthesis and solution conformation of Boc-D-Glu-Ala-Gly-Lys-NHMe and Boc-L-Glu-Ala-Gly-Lys-NHMe.

Y. Sasidhar, S. Durani, V. Bobde, 2009, International journal of peptide and protein research.

Analysis of the structural consensus of the zinc coordination centers of metalloprotein structures.

Kirti Patel, Susheel Durani, Anil Kumar, 2007, Biochimica et biophysica acta.

Seco-oestradiols and some non-steroidal oestrogens: structural correlates of oestrogenic action.

B. S. Setty, S. Durani, R. Gupta, 1979, Journal of steroid biochemistry.

Cis isomer of centchroman--a selective ligand for the microsomal antiestrogen binding site.

S. Durani, A. Saeed, S. Ray, 1984, Biochemical and biophysical research communications.

Collisional activation spectra of the adduct ions of 1,2,3‐triarylpropenones under ammonia chemical ionization conditions

K. P. Madhusudanan, S. Durani, D. Fraisse, 1990 .

A small peptide stereochemically customized as a globular fold with a molecular cleft.

S. Durani, B. Kundu, Soumendra Rana, 2005, Chemical communications.

Modulation of β‐Hairpin Peptide Self‐Assembly: A Twenty‐Residue Poly‐l β‐Hairpin Modified Rationally as a Mixed‐l,d Hydrolase

S. Durani, Bhupesh Goyal, K. R. Srivastava, 2016 .

A mixed-α,β miniprotein stereochemically reprogrammed to high-binding affinity for acetylcholine

S. Durani, B. Kundu, Soumendra Rana, 2007 .

The interplay of sequence and stereochemistry in defining conformation in proteins and polypeptides.

S. Durani, Anilesh Kumar, Vibin Ramakrishnan, 2006, Biopolymers.

Computational design of proteins stereochemically optimized in size, stability, and folding speed.

P. Wangikar, S. Durani, S. Joshi, 2006, Biopolymers.

Stereospecific peptide folds. A rationally designed molecular bracelet.

S. Durani, B. Kundu, Soumendra Rana, 2004, Chemical communications.

Mechanism-based protein design: attempted "nucleation-condensation" approach to a possible minimal helix-bundle protein.

S. Durani, B. Kundu, M. Dhanasekaran, 2003, Biopolymers.

Reengineering a type II beta-turn as a potential helix nucleator. Part I. Crystal structure of Boc-Val-Pro-(D)Asp-Asp-Val-OMe monohydrate.

F. Fabiola, S. Durani, V. Pattabhi, 2009, The journal of peptide research : official journal of the American Peptide Society.

N‐terminal diproline and charge group effects on the stabilization of helical conformation in alanine‐based short peptides: CD studies with water and methanol as solvent

S. Durani, Bhupesh Goyal, K. R. Srivastava, 2017, Journal of peptide science : an official publication of the European Peptide Society.

Automated protein design: Landmarks and operational principles.

Anil Kumar, Vibin Ramakrishnan, Ranjit Ranbhor, 2017, Progress in biophysics and molecular biology.

Probing the role of electrostatics of polypeptide main-chain in protein folding by perturbing N-terminal residue stereochemistry: DFT study with oligoalanine models

S. Durani, Anilesh Kumar, G. Patwari, 2016 .

Algorithm to design inhibitors using stereochemically mixed l,d polypeptides: Validation against HIV protease.

S. Durani, Pooja Gupta, 2015, International journal of biological macromolecules.

Simulated folding in polypeptides of diversified molecular tacticity: implications for protein folding and de novo design.

S. Durani, Vibin Ramakrishnan, Ranjit Ranbhor, 2005, Biopolymers.

De novo design of stereochemically-bent sixteen-residue β-hairpin as a hydrolase mimic

S. Durani, Bhupesh Goyal, K. R. Srivastava, 2015 .

Redox Specificity of 2-Hydroxyacid-Coupled NAD+/NADH Dehydrogenases: A Study Exploiting “Reactive” Arginine as a Reporter of Protein Electrostatics

S. Durani, Pooja Gupta, M. A. Jairajpuri, 2013, PloS one.

HOCGO and DMACGO. Two coumarin derived alpha-dicarbonyls suitable as pH and polarity sensitive fluorescent reporters for proteins that can be targeted at reactive arginines.

S. Durani, K. Baburaj, N. Azam, 1994, Biochimica et biophysica acta.

Utility of 4-Trimethylsiloxyphenylmagnesium Bromide in Grignard Reactions

S. Durani, N. Anand, R. Kapil, 1982 .

Antifertility agents. 38. Effect of the side chain and its position on the activity of 3,4-diarylchromans.

S. Durani, S. Ray, N. Anand, 1983, Journal of medicinal chemistry.

Structure-activity relationship of antiestrogens. Studies on 2,3-diaryl-1-benzopyrans.

S. Durani, A. Saeed, R. Kapil, 1990, Journal of medicinal chemistry.

Scrutiny of electrostatic-driven conformational ordering of polypeptide chains in DMSO: a study with a model oligopeptide

S. Durani, Anilesh Kumar, Bhupesh Goyal, 2017 .

Occurrence of β‐bends in bradykinin dissolved in DMSO‐d6

S. Durani, S. Srivastava, R. Phadke, 1990 .

Structure-activity relationship of antiestrogens. Phenolic analogues of 2,3-diaryl-2H-1-benzopyrans.

S. Durani, A. Saeed, R. Kapil, 1990, Journal of Medicinal Chemistry.

Structure‐Activity Relationship of Antiestrogens. Phenolic Analogues of 2,3‐Diaryl‐2H‐1‐benzopyrans.

S. Durani, Anindra Sharma, A. Saeed, 2010 .

Crystal structures of heterochiral peptides. Part II. tert-Boc-valyl-D-alanyl-leucyl-alanyl methoxide.

S. Durani, V. Pattabhi, A. Johnson, 2009, The journal of peptide research : official journal of the American Peptide Society.

Constrained phenylalanyl peptides via a [2+2+2]-cycloaddition strategy

S. Durani, S. Kotha, K. Mohanraja, 2000 .

Scrutiny of chain-length and N-terminal effects in α-helix folding: a molecular dynamics study on polyalanine peptides

S. Durani, Anilesh Kumar, Bhupesh Goyal, 2017, Journal of biomolecular structure & dynamics.

Combined sequence and structure analysis of the fungal laccase family

Pramod P Wangikar, P. Wangikar, S. Durani, 2003, Biotechnology and bioengineering.

Exploring borate-activated electron-rich glyoxals as the arginine-reactivity probes. The reactivities of functionally critical arginines in some representative enzymes.

S. Durani, A. Saeed, K. Baburaj, 1991, Biochimica et biophysica acta.

Biomimetic design: a programmed tetradecapeptide folds and auto-dimerizes as a stereochemically articulated receptor protein

Deepa V. Pednekar, S. Durani, Punam Ghosh, 2016 .

Computational design by evolving folds and assemblies over the alphabet in L- and D-α-amino acids

S. Durani, A. U. Mushtaq, Punam Ghosh, 2012 .

Cured of "stickiness", poly-L β-hairpin is promoted with LL-to-DD mutation as a protein and a hydrolase mimic.

S. Durani, Anilesh Kumar, N. Kishore, 2010, The journal of physical chemistry. B.

Zinc-finger hydrolase: Computational selection of a linker and a sequence towards metal activation with a synthetic αββ protein.

S. Durani, K. R. Srivastava, Kirti Patel, 2010, Bioorganic & medicinal chemistry.

Dose dependent modulation of receptor dynamics and uterine growth in immature rat by estradiol: importance of an additional nuclear binding at 24 hr for long-term (72 hr) uterine growth.

S. Durani, A. Agarwal, B. Setty, 1982, Endokrinologie.

Electrostatics‐defying interaction between arginine termini as a thermodynamic driving force in protein–protein interaction

Abhijit R. Tendulkar, Deepa V. Pednekar, S. Durani, 2009, Proteins.

N‐1 and N‐2 positional effects in the propagation of 310‐type fold in the helical model peptide Boc– (D)Glu– Pro– Ala– Lys– Ala– Leu– Ala– OMe

S. Durani, S. Srivastava, M. Dhanasekaran, 2000 .