N. Niu

发表

The eSNV-detect: a computational system to identify expressed single nucleotide variants from transcriptome sequencing data

Krishna R. Kalari, Quin F. Wills, Kevin J. Thompson, 2014, Nucleic acids research.

In vitro human cell line models to predict clinical response to anticancer drugs.

Liewei Wang, N. Niu, 2015, Pharmacogenomics.

Multi-Institutional Evaluation of Inter-rater Agreement of Variant Classification Based on the 2017 AMP, ASCO and CAP Standards and Guidelines for the Interpretation and Reporting of Sequence Variants in Cancer.

Robert L Schmidt, Dara L Aisner, Susan J Hsiao, 2019, The Journal of molecular diagnostics : JMD.

Circular RNAs and their associations with breast cancer subtypes

Krishna R. Kalari, Kevin J. Thompson, Asha A. Nair, 2016, Oncotarget.

Apolipoprotein M promoter polymorphisms alter promoter activity and confer the susceptibility to the development of type 1 diabetes.

Y. Liu, Y. Liu, N. Niu, 2009, Clinical biochemistry.

Single nucleotide polymorphisms in the proximal promoter region of apolipoprotein M gene (apoM) confer the susceptibility to development of type 2 diabetes in Han Chinese

Y. Liu, Y. Liu, N. Niu, 2007, Diabetes/metabolism research and reviews.

Inflammatory Myofibroblastic Tumor of the Uterus

E. Oliva, K. K. van de Vijver, E. Burandt, 2020, The American journal of surgical pathology.

M129V polymorphism in the prion protein gene is not associated with mesial temporal lobe epilepsy in a Han Chinese population

N. Niu, L. Li, X. Wu, 2008, European journal of neurology.

Next generation sequencing identifies two Genomically distinct groups among pyloric gland adenomas.

Lauren L. Ritterhouse, Sabah Kadri, N. Niu, 2019, Human pathology.

Synchronous and Metastatic Papillary and Follicular Thyroid Carcinomas with Unique Molecular Signatures

N. Cipriani, Sabah Kadri, N. Niu, 2018, Endocrine Pathology.

Genetic Variation and Association Analyses of the Nuclear Respiratory Factor 1 (nRF1) Gene in Chinese Patients With Type 2 Diabetes

Y. Liu, Y. Liu, N. Niu, 2008, Diabetes.

Model-based unsupervised learning informs metformin-induced cell-migration inhibition through an AMPK-independent mechanism in breast cancer

Krishna R. Kalari, Quin F. Wills, Alan J. Gaglio, 2017, Oncotarget.

Genetic Variation and Association Analyses of the Nuclear Respiratory Factor 1 (NRF1) Gene in Chinese Patients with Type 2 Dia

N. Niu, H. Gu, Xi-lin Zhu, 2007 .

Human leukocyte antigen class I and class II genes polymorphisms might be associated with interferon α therapy efficiency of chronic hepatitis B.

N. Niu, Xi-lin Zhu, T. Du, 2011, Antiviral research.

Metformin pharmacogenomics: a genome-wide association study to identify genetic and epigenetic biomarkers involved in metformin anticancer response using human lymphoblastoid cell lines.

Krishna R. Kalari, Erin E. Carlson, K. Kalari, 2016, Human molecular genetics.

Beta-Poisson model for single-cell RNA-seq data analyses

Krishna R. Kalari, Quin F. Wills, Mattias Rantalainen, 2016, Bioinform..

Radiation pharmacogenomics: a genome-wide association approach to identify radiation response biomarkers using human lymphoblastoid cell lines.

Krishna R. Kalari, Krishna R Kalari, Liewei Wang, 2010, Genome research.

Multi-Institutional Evaluation of Interrater Agreement of Variant Classification Based on the 2017 Association for Molecular Pathology, American Society of Clinical Oncology, and College of American Pathologists Standards and Guidelines for the Interpretation and Reporting of Sequence Variants in Ca

Larissa V Furtado, Lauren L. Ritterhouse, S. Murray, 2020 .

Discovery of genetic biomarkers contributing to variation in drug response of cytidine analogues using human lymphoblastoid cell lines

Krishna R. Kalari, D. Schaid, K. Kalari, 2014, BMC Genomics.

Clinical Validation of a Next-Generation Sequencing Genomic Oncology Panel via Cross-Platform Benchmarking against Established Amplicon Sequencing Assays.

Michelle N Wurst, Larissa V Furtado, Megan E. McNerney, 2017, The Journal of molecular diagnostics : JMD.

CDC25B partners with PP2A to induce AMPK activation and tumor suppression in triple negative breast cancer

Krishna R. Kalari, Erin E. Carlson, K. Kalari, 2020, NAR cancer.

Genetic association with overall survival of taxane-treated lung cancer patients - a genome-wide association study in human lymphoblastoid cell lines followed by a clinical association study

Krishna R. Kalari, Zhifu Sun, Liang Li, 2012, BMC Cancer.

Isoform-level gene expression patterns in single-cell RNA-sequencing data

Krishna R. Kalari, Quin F. Wills, Mattias Rantalainen, 2016, bioRxiv.

System for Informatics in the Molecular Pathology Laboratory: An Open-Source End-to-End Solution for Next-Generation Sequencing Clinical Data Management.

Jorge Andrade, Samuel L Volchenboum, Dara L Aisner, 2018, The Journal of molecular diagnostics : JMD.

Genetic Variation Predicting Cisplatin Cytotoxicity Associated with Overall Survival in Lung Cancer Patients Receiving Platinum-Based Chemotherapy

Zhifu Sun, Daniel J Schaid, Liewei Wang, 2011, Clinical Cancer Research.

Clonal evolution underlying leukemia progression and Richter transformation in patients with ibrutinib-relapsed CLL.

Sonali M. Smith, Sabah Kadri, W. Stock, 2017, Blood advances.

Ibrutinib and venetoclax target distinct subpopulations of CLL cells: implication for residual disease eradication

R. Larson, M. Wasik, N. Niu, 2021, Blood cancer journal.

TSPYL Family Regulates CYP17A1 and CYP3A4 Expression: Potential Mechanism Contributing to Abiraterone Response in Metastatic Castration‐Resistant Prostate Cancer

R. Weinshilboum, Liewei Wang, Duan Liu, 2017, Clinical pharmacology and therapeutics.

Joe Y. Chang, G. Jenkins, R. Weinshilboum, 2014, Clinical pharmacology and therapeutics.

Human glucocorticoid receptor alpha gene (NR3C1) pharmacogenomics: gene resequencing and functional genomics.

Krishna R. Kalari, D. Schaid, K. Kalari, 2009, The Journal of clinical endocrinology and metabolism.

Improvement of the sensitivity and resolution of PCR-SSCP analysis with optimized primer concentrations in PCR products

N. Niu, H. Gu, Xi-lin Zhu, 2006, Journal of Genetics.

Gemcitabine Cytotoxicity: Interaction of Efflux and Deamination.

Krishna R. Kalari, Liang Li, Krishna R Kalari, 2011, Journal of drug metabolism & toxicology.

Targeted mutational analysis of inflammatory bowel disease-associated colorectal cancers.

Michelle N Wurst, Sushant A. Patil, D. Rubin, 2019, Human pathology.

HEATR1 Negatively Regulates Akt to Help Sensitize Pancreatic Cancer Cells to Chemotherapy.

Liewei Wang, N. Niu, Z. Lou, 2016, Cancer research.

Identification of genetic variants or genes that are associated with Homoharringtonine (HHT) response through a genome-wide association study in human lymphoblastoid cell lines (LCLs)

Krishna R. Kalari, K. Kalari, G. Jenkins, 2015, Front. Genet..

Association between the γ-aminobutyric acid type B receptor 1 and 2 gene polymorphisms and mesial temporal lobe epilepsy in a Han Chinese population

Aihua Liu, Nifang Niu, Yang Liu, 2008, Epilepsy Research.

Alternating EM algorithm for a bilinear model in isoform quantification from RNA-seq data

Krishna R. Kalari, Yudi Pawitan, Liewei Wang, 2019, Bioinform..

Genetic Variation Predicting Cisplatin Cytotoxicity Associated with Overall Survival in Lung Cancer Patients Receiving Platinum-Based Chemotherapy

D. Schaid, B. Fridley, G. Jenkins, 2011, Clinical Cancer Research.