Rachel M. Miller

发表

Comprehensive in vivo identification of the c-Myc mRNA protein interactome using HyPR-MS

Anthony J. Cesnik, Lloyd M. Smith, M. Scalf, 2019, RNA.

Identification and Quantification of Proteoforms by Mass Spectrometry

Liangliang Sun, Zhijie Wu, Ying Ge, 2019, Proteomics.

Constructing Human Proteoform Families Using Intact-Mass and Top-Down Proteomics with a Multi-Protease Global PTM Discovery Database.

Michael R. Shortreed, Robert J. Millikin, Brian L. Frey, 2019, Journal of proteome research.

Improved Protein Inference from Multiple Protease Bottom-Up Mass Spectrometry Data.

Michael R. Shortreed, Robert J. Millikin, Lloyd M. Smith, 2019, Journal of proteome research.

Binary Classifier for Computing Posterior Error Probabilities in MetaMorpheus.

Brian L. Frey, Lloyd M. Smith, M. Shortreed, 2021, Journal of proteome research.

ProteaseGuru: A Tool for Protease Selection in Bottom-Up Proteomics.

Lloyd M. Smith, Rachel M. Miller, K. Ibrahim, 2021, Journal of proteome research.

Constructing Human Proteoform Families Using Intact-Mass and Top-Down Proteomics with a Multi-Protease Global Post-Translational Modification Discovery Database global PTM discovery; multi-protease;

Brian L. Frey, Lloyd M. Smith, M. Scalf, 2019 .

Overview and considerations in bottom-up proteomics.

Rachel M. Miller, Lloyd M. Smith, 2022, The Analyst.

Enhanced protein isoform characterization through long-read proteogenomics

Lloyd M. Smith, Gloria M. Sheynkman, A. Conesa, 2022, Genome Biology.

Identifying Protein Interactomes of Target RNAs Using HyPR-MS.

Lloyd M. Smith, M. Scalf, Michele Spiniello, 2021, Methods in molecular biology.

Discovery of Dehydroamino Acid Residues in the Capsid and Matrix Structural Proteins of HIV-1.

Brian L. Frey, Lloyd M. Smith, M. Scalf, 2022, Journal of proteome research.

Construction of Human Proteoform Families from 21 Tesla Fourier Transform Ion Cyclotron Resonance Mass Spectrometry Top-Down Proteomic Data.

Leah V Schaffer, Michael R Shortreed, Lloyd M Smith, 2020, Journal of proteome research.

Spritz: A Proteogenomic Database Engine

Lei Lu, Michael R. Shortreed, Anthony J. Cesnik, 2020, bioRxiv.

IsoBayes: a Bayesian approach for single-isoform proteomics inference

M. Shortreed, Rachel M. Miller, Simone Tiberi, 2024, bioRxiv.