S. Clarke

S. Clarke, K. Thong, M. N. Mohd Desa, 2014, Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases.

Characterization of community and hospital Staphylococcus aureus isolates in Southampton, UK.

S. Clarke, P. Marsh, J. Jefferies, 2010, Journal of medical microbiology.

A mosaic tetracycline resistance gene tet(S/M) detected in an MDR pneumococcal CC230 lineage that underwent capsular switching in South Africa

Andries J. van Tonder, S. Madhi, S. Sekaran, 2019, The Journal of antimicrobial chemotherapy.

What a Load of Old Sequence!!!

S. Clarke, M. Diggle, 2002, Journal of Clinical Microbiology.

Pneumococcal surveillance in Malaysia and the need for carriage studies

S. Clarke, H. McNeil, A. I. Mohamad, 2015, International e-Journal of Science, Medicine & Education.

Drivers of year-to-year variation in exacerbation frequency of COPD: analysis of the AERIS cohort

S. Wootton, S. Clarke, E. Aris, 2019, ERJ Open Research.

Longitudinal profiling of the lung microbiome in the AERIS study demonstrates repeatability of bacterial and eosinophilic COPD exacerbations

James R. Brown, D. Simola, M. Magid-Slav, 2018, Thorax.

Enteropathogenic Escherichia coli infection: history and clinical aspects

S. Clarke, P. Freestone, R. Haigh, 2002, British journal of biomedical science.

Global funding trends for malaria research in sub-Saharan Africa: a systematic analysis

A. Tatem, J. Scott, R. Atun, 2017, The Lancet. Global health.

A single nucleotide polymorphism identification assay for the genotypic characterisation of Neisseria meningitidis using MALDI-TOF mass spectrometry

M. A. Diggle, S. Clarke, C. A. Lowe, 2004, British journal of biomedical science.

Molecular methods for the detection and characterization of Neisseria meningitidis

S. Clarke, M. Diggle, 2006, Expert review of molecular diagnostics.

Molecular Epidemiology of Pneumococcal Colonization in Response to Pneumococcal Conjugate Vaccination in Children with Recurrent Acute Otitis Media

A. Schilder, A. Schilder, R. Veenhoven, 2005, Journal of Clinical Microbiology.

Carriage rates, circulating serotypes and antibiotic resistance among Streptococcus pneumoniae in healthy infants in Yei, South Sudan

S. Clarke, M. Dryden, K. Saeed, 2011 .

Distribution of epidemic antibiotic-resistant pneumococcal clones in Scottish pneumococcal isolates analysed by multilocus sequence typing.

S. Clarke, T. Mitchell, C. Dowson, 2006, Microbiology.

Pneumococcal lineages associated with serotype replacement and antibiotic resistance in childhood invasive pneumococcal disease in the post-PCV13 era: an international whole-genome sequencing study

Andries J. van Tonder, S. Madhi, M. Hasanuzzaman, 2019, The Lancet. Infectious diseases.

Impact of bacterial strain acquisition in the lung of patients with COPD: the AERIS study

S. Clarke, J. Devaster, T. Wilkinson, 2022, Infectious diseases.

Global emergence and population dynamics of divergent serotype 3 CC180 pneumococci

W. Hanage, S. Bentley, S. Clarke, 2018, bioRxiv.

Presence of nonhemolytic pneumolysin in serotypes of Streptococcus pneumoniae associated with disease outbreaks.

S. Clarke, T. Mitchell, G. Pluschke, 2007, The Journal of infectious diseases.

Genomic Diversity between Strains of the Same Serotype and Multilocus Sequence Type among Pneumococcal Clinical Isolates

J. Hinds, S. Clarke, T. Mitchell, 2006, Infection and Immunity.

Pneumococcal 13-valent conjugate vaccine for the prevention of invasive pneumococcal disease in children and adults

S. Clarke, S. Faust, R. Gladstone, 2012, Expert review of vaccines.

Meningococcal disease due to serogroup Y in Scotland, 1992-1999.

S. Clarke, G. Edwards, J. Reid, 2001, British journal of biomedical science.

Death or survival from invasive pneumococcal disease in Scotland: associations with serogroups and multilocus sequence types

D. Greenhalgh, S. Clarke, C. Robertson, 2011, Journal of medical microbiology.

Identification of Invasive Serotype 1 Pneumococcal Isolates That Express Nonhemolytic Pneumolysin

S. Clarke, Y. Jing, T. Mitchell, 2006, Journal of Clinical Microbiology.

Distribution of carried pneumococcal clones in UK children following the introduction of the 7-valent pneumococcal conjugate vaccine: a 3-year cross-sectional population based analysis.

S. Clarke, S. Faust, M. Christodoulides, 2013, Vaccine.

Global Distribution of Invasive Serotype 35D Streptococcus pneumoniae Isolates following Introduction of 13-Valent Pneumococcal Conjugate Vaccine

Andries J. van Tonder, S. Madhi, S. Bentley, 2018, Journal of Clinical Microbiology.

Current methods for capsular typing of Streptococcus pneumoniae.

M. Hibberd, S. Clarke, S. Faust, 2015, Journal of microbiological methods.

13-valent pneumococcal conjugate vaccine (PCV13)

S. Clarke, S. Faust, J. Jefferies, 2011, Human vaccines.

Control of pneumococcal disease in the United Kingdom--the start of a new era.

S. Clarke, 2006, Journal of medical microbiology.

Potential Impact of Conjugate Vaccine on the Incidence of Invasive Pneumococcal Disease among Children in Scotland

S. Clarke, T. Mitchell, G. Edwards, 2006, Journal of Clinical Microbiology.

The epidemiology of pneumococcal carriage and infections in Malaysia

S. Sekaran, S. Clarke, C. Le, 2012, Expert review of anti-infective therapy.

Complete Genome Sequencing of Acinetobacter baumannii AC1633 and Acinetobacter nosocomialis AC1530 Unveils a Large Multidrug-Resistant Plasmid Encoding the NDM-1 and OXA-58 Carbapenemases

S. Clarke, N. I. A. Rahman, A. G. Alattraqchi, 2020, mSphere.

Automated pneumococcal MLST using liquid-handling robotics and a capillary DNA sequencer

S. Clarke, T. Mitchell, C. Dowson, 2003, Molecular biotechnology.

Interlaboratory Comparison of PCR-Based Identification and Genogrouping of Neisseria meningitidis

S. Clarke, D. Caugant, P. Kriz, 2005, Journal of Clinical Microbiology.

Truncated xpt gene present in invasive Streptococcus pneumoniae may have implications for MLST schemes.

M. A. Diggle, S. Clarke, 2005, Journal of medical microbiology.

Antibiotic resistance in invasive Streptococcus pneumoniae isolates identified in Scotland between 1999 and 2007.

S. Clarke, T. Mitchell, G. Edwards, 2010, Journal of medical microbiology.

Erythromycin resistance in invasive serotype 14 pneumococci is highly related to clonal type.

S. Clarke, K. Scott, S. Mcchlery, 2004, Journal of medical microbiology.

Serotype distribution of invasive, non-invasive and carried Streptococcus pneumoniae in Malaysia: a meta-analysis

S. Clarke, C. Le, D. Cleary, 2021, Pneumonia.

Trends in serotypes and sequence types among cases of invasive pneumococcal disease in Scotland, 1999-2010.

T. J. Mitchell, D. Greenhalgh, S. Clarke, 2014, Vaccine.

Continued control of pneumococcal disease in the UK - the impact of vaccination.

S. Clarke, S. Faust, R. Gladstone, 2011, Journal of medical microbiology.

Prevalence of Streptococcus pneumoniae serotypes causing invasive and non-invasive disease in South East Asia: a review.

M. Hibberd, S. Clarke, E. Jauneikaite, 2012, Vaccine.

Analysis of PorA variable region 3 in meningococci: implications for vaccine policy?

M. Unemo, M. A. Diggle, S. Clarke, 2003, Vaccine.

Serotypes and Sequence Types of Pneumococci Causing Invasive Disease in Scotland Prior to the Introduction of Pneumococcal Conjugate Polysaccharide Vaccines

S. Clarke, K. Scott, S. Mcchlery, 2004, Journal of Clinical Microbiology.

Non-invasive pneumococcal disease and antimicrobial resistance: vaccine implications

H. Campbell, S. Clarke, M. Kyaw, 2002, Epidemiology and Infection.

Erythromycin resistance among invasive pneumococci in Scotland, 1994-2003

M. A. Diggle, S. Clarke, G. Edwards, 2005, British journal of biomedical science.

M. A. Diggle, S. Clarke, D. Lawrie, 2004, Journal of medical microbiology.

Changes in serotype prevalence of Streptococcus pneumoniae in Southampton, UK between 2006 and 2018

S. Bentley, S. Clarke, S. Faust, 2022, Scientific Reports.

Patients with Chronic Obstructive Pulmonary Disease harbour a variation of Haemophilus species

S. Wootton, S. Schoonbroodt, S. Clarke, 2018, Scientific Reports.

Low-Dose Nitric Oxide as Targeted Anti-biofilm Adjunctive Therapy to Treat Chronic Pseudomonas aeruginosa Infection in Cystic Fibrosis

S. Rice, S. Kjelleberg, S. Clarke, 2017, Molecular therapy : the journal of the American Society of Gene Therapy.

The impact and effectiveness of pneumococcal vaccination in Scotland for those aged 65 and over during winter 2003/2004

Colin Simpson, S. Clarke, C. Robertson, 2008, BMC infectious diseases.

Invasive pneumococcal disease in Scotland, 1999-2001: use of record linkage to explore associations between patients and disease in relation to future vaccination policy.

H. Campbell, P. Christie, S. Clarke, 2003, Clinical infectious diseases : an official publication of the Infectious Diseases Society of America.

Lifestyle risk factors for invasive pneumococcal disease: a systematic review

S. Clarke, J. Jefferies, Helen C Cruickshank, 2014, BMJ Open.

Whole gene pneumolysin PCR can be used as a diagnostic assay but cannot predict serotype

S. Clarke, S. Mcchlery, J. Kerrigan, 2004, British journal of biomedical science.

Sampling methods for the study of pneumococcal carriage: a systematic review.

S. Clarke, S. Faust, R. Gladstone, 2012, Vaccine.

Detection and genotyping of meningococci using a nested PCR approach.

M. A. Diggle, S. Clarke, 2003, Journal of medical microbiology.

Pronounced Metabolic Changes in Adaptation to Biofilm Growth by Streptococcus pneumoniae

P. Skipp, S. Clarke, S. Faust, 2014, PloS one.

Pneumococcal vaccine impacts on the population genomics of non-typeable Haemophilus influenzae

S. Bentley, S. Clarke, S. Faust, 2017, bioRxiv.

Corrigendum: Pneumococcal vaccine impacts on the population genomics of non-typeable Haemophilus influenzae

S. Bentley, S. Clarke, S. Faust, 2017, bioRxiv.

Automation of a fluorescence-based multiplex PCR for the laboratory confirmation of common bacterial pathogens.

S. Clarke, M. Diggle, Karen Smith, 2004, Journal of medical microbiology.

Neisseria meningitidis Sequence Type and Risk for Death, Iceland

S. Clarke, K. Kristinsson, H. Erlendsdóttir, 2006, Emerging infectious diseases.

Invasive Meningococcal Disease in Scotland, 1994 to 1999, with Emphasis on Group B Meningococcal Disease

H. Campbell, P. Christie, S. Clarke, 2002, Journal of Clinical Microbiology.

Evaluation of a Fluorescence-Based PCR Method for Identification of Serogroup A Meningococci

S. Clarke, M. Diggle, E. Girvan, 2003, Journal of Clinical Microbiology.

Intracellular residency of Staphylococcus aureus within mast cells in nasal polyps: A novel observation.

Susan J Wilson, S. Clarke, S. Faust, 2015, The Journal of allergy and clinical immunology.

Identification of Neisseria meningitidis Serogroups Y and W135 by siaD Nucleotide Sequence Analysis

S. Clarke, C. Lewis, 2003, Journal of Clinical Microbiology.

Nucleotide sequence-based typing of meningococci directly from clinical samples.

S. Clarke, M. Diggle, C. Bell, 2003, Journal of medical microbiology.

Declining serotype coverage of new pneumococcal conjugate vaccines relating to the carriage of Streptococcus pneumoniae in young children.

S. Clarke, S. Faust, M. Christodoulides, 2011, Vaccine.

Immune reconstitution in children following chemotherapy for acute leukemia

S. Clarke, S. Faust, A. Vora, 2020, EJHaem.

The impact of meningococcal serogroup C conjugate vaccine in Scotland.

P. Christie, S. Clarke, C. Robertson, 2004, Clinical infectious diseases : an official publication of the Infectious Diseases Society of America.

The characterization of Moraxella catarrhalis carried in the general population

S. Clarke, D. Cleary, Denise E. Morris, 2022, Microbial genomics.

Confirmation of meningococcal disease by urinary antigen testing.

S. Clarke, G. Edwards, J. Reid, 2001, Clinical microbiology and infection : the official publication of the European Society of Clinical Microbiology and Infectious Diseases.

Genotypic characterization of Neisseria meningitidis using pyrosequencing™

M. A. Diggle, S. Clarke, 2004, Molecular biotechnology.

Cephalosporin-NO-donor prodrug PYRRO-C3D shows β-lactam-mediated activity against Streptococcus pneumoniae biofilms.

S. Clarke, S. Faust, P. Stoodley, 2017, Nitric oxide : biology and chemistry.

Nucleotide Sequence Analysis of the Sialyltransferase Genes of Meningococcal Serogroups B, C, Y and W135

M. A. Diggle, S. Clarke, C. Lewis, 2003, Journal of Molecular Microbiology and Biotechnology.

Implications for the Serogroup Incidence of Meningococcal Disease after the Introduction of the Menc Vaccine

S. Clarke, G. Edwards, 2000, Scottish medical journal.

Vaccination in Southeast Asia--reducing meningitis, sepsis and pneumonia with new and existing vaccines.

S. Clarke, Denise E. Morris, A. Richardson, 2014, Vaccine.

Vaccine preventable meningitis in Malaysia: epidemiology and management

S. Clarke, H. McNeil, J. Jefferies, 2015, Expert review of anti-infective therapy.

Biocide susceptibilities and biofilm-forming capacities of Acinetobacter baumannii clinical isolates from Malaysia.

S. Clarke, A. G. Alattraqchi, C. Yeo, 2019, Journal of infection in developing countries.

Prevalence and antimicrobial susceptibilities of Acinetobacter baumannii and non-baumannii Acinetobacters from Terengganu, Malaysia and their carriage of carbapenemase genes.

S. Clarke, A. G. Alattraqchi, C. Yeo, 2018, Journal of medical microbiology.

Increase in Serotype 6C Pneumococcal Carriage, United Kingdom

S. Clarke, S. Faust, M. Christodoulides, 2010, Emerging infectious diseases.

Serotype prevalence of Streptococcus pneumoniae in Malaysia - the need for carriage studies.

S. Clarke, H. McNeil, 2016, The Medical journal of Malaysia.

Temporal Analysis of Invasive Pneumococcal Clones from Scotland Illustrates Fluctuations in Diversity of Serotype and Genotype in the Absence of Pneumococcal Conjugate Vaccine

S. Clarke, T. Mitchell, G. Edwards, 2009, Journal of Clinical Microbiology.

Detection of Neisseria meningitidis, Streptococcus pneumoniae, and Haemophilus influenzae in blood and cerebrospinal fluid using fluorescence-based PCR.

S. Clarke, 2006, Methods in molecular biology.

Virulence of Enteropathogenic Escherichia coli, a Global Pathogen

P. Williams, S. Clarke, P. Freestone, 2003, Clinical Microbiology Reviews.

The upper respiratory tract microbiome of indigenous Orang Asli in north-eastern Peninsular Malaysia

S. Clarke, A. G. Alattraqchi, C. Yeo, 2020, npj Biofilms and Microbiomes.

The use of hydrolysis and hairpin probes in real-time PCR

S. Clarke, S. Mcchlery, S. McChlery, 2003, Molecular biotechnology.

Epidemiological and ecological modelling reveal diversity in upper respiratory tract microbial population structures from a cross-sectional community swabbing study

P. Roderick, S. Clarke, S. Faust, 2017, bioRxiv.

The nasopharyngeal microbiome.

S. Clarke, D. Cleary, 2017, Emerging topics in life sciences.

Secondary Bacterial Infections Associated with Influenza Pandemics

S. Clarke, D. Cleary, Denise E. Morris, 2017, Front. Microbiol..

Laboratory confirmation of meningococcal disease in Scotland, 1993-9.

S. Clarke, G. Edwards, J. Reid, 2002, Journal of clinical pathology.

Developments in the diagnosis of meningococcal disease and the characterization of Neisseria meningitidis

S. Clarke, G. Edwards, M. Diggle, 2001 .

Nasopharyngeal Bacterial Carriage in the Conjugate Vaccine Era with a Focus on Pneumococci

S. Clarke, S. Faust, J. Jefferies, 2015, Journal of immunology research.

Comparison of Commercial DNA Extraction Kits for Extraction of Bacterial Genomic DNA from Whole-Blood Samples

M. A. Diggle, S. Clarke, S. C. Clarke, 2003, Journal of Clinical Microbiology.

The adhesins of non-typeable Haemophilus influenzae

S. Clarke, C. Woelk, D. Cleary, 2018, Expert review of anti-infective therapy.

Mapping pneumonia research: A systematic analysis of UK investments and published outputs 1997–2013

R. Atun, J. Scott, M. Head, 2015, EBioMedicine.

Parallel Evolution in Streptococcus pneumoniae Biofilms

Richard J. Edwards, Raju V. Misra, S. Gharbia, 2016, Genome biology and evolution.

Sequence Typing at the Speed of Light

M. A. Diggle, S. Clarke, 2004 .

Lactoferrin modulates the biofilm formation and bap gene expression of methicillin-resistant Staphylococcus epidermidis.

S. Clarke, R. Khanum, P. Chung, 2022, Canadian journal of microbiology.

Tyrosine phosphorylation in Escherichia coli.

T. Nyström, S. Clarke, P. Freestone, 1998, Journal of molecular biology.

Clostridium difficile in children: a review of existing and recently uncovered evidence.

P. Roderick, S. Clarke, S. Faust, 2013, Advances in experimental medicine and biology.

Draft Genome Sequences of Two Acinetobacter soli Clinical Isolates from a Tertiary Hospital in Terengganu, Malaysia

S. Clarke, C. Yeo, Farahiyah Mohd Rani, 2022, Microbiology resource announcements.

Elucidating the survival and response of carbapenem resistant Klebsiella pneumoniae after exposure to imipenem at sub-lethal concentrations

S. Clarke, I. Yap, C. Teh, 2018, Pathogens and global health.

Relationship of CT-quantified emphysema, small airways disease and bronchial wall dimensions with physiological, inflammatory and infective measures in COPD

S. Wootton, S. Clarke, E. Aris, 2018, Respiratory Research.

Impact and associations of eosinophilic inflammation in COPD: analysis of the AERIS cohort

S. Wootton, S. Clarke, N. Coombs, 2017, European Respiratory Journal.

Carriage of upper respiratory tract pathogens in rural communities of Sarawak, Malaysian Borneo

N. McGrath, P. Roderick, S. Clarke, 2021, Pneumonia.

Microbial epidemiology and carriage studies for the evaluation of vaccines.

C. Patrick Doncaster, P. Roderick, S. Clarke, 2019, Journal of medical microbiology.

Investment in pneumonia and pneumococcal research.

R. Atun, J. Scott, M. Head, 2014, The Lancet. Infectious diseases.

Phylogenetic relationship of non-typeable Haemophilus influenzae isolated in Malaysia.

S. Clarke, Z. Mohd-Zain, N. Ahmad, 2015, Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases.

Serotype distribution of disease-causing Streptococcus pneumoniae in Thailand: A systematic review.

S. Clarke, Somporn Srifeungfung, D. Cleary, 2019, Vaccine.

Five winters of pneumococcal serotype replacement in UK carriage following PCV introduction

S. Bentley, S. Clarke, S. Faust, 2015, Vaccine.

Evaluation of PCR-based approach for serotype determination of Streptococcus pneumoniae.

S. Clarke, M. Desa, F. Jamal, 2013, Tropical biomedicine.

Clonal Expansion within Pneumococcal Serotype 6C after Use of Seven-Valent Vaccine

N. Loman, C. Constantinidou, J. Chan, 2013, PloS one.

The rise and fall of pneumococcal serotypes carried in the PCV era.

S. Bentley, S. Clarke, S. Faust, 2017, Vaccine.

Acute Exacerbation and Respiratory InfectionS in COPD (AERIS): protocol for a prospective, observational cohort study

S. Clarke, E. Aris, W. Ballou, 2014, BMJ Open.

International links between Streptococcus pneumoniae vaccine serotype 4 sequence type (ST) 801 in Northern European shipyard outbreaks of invasive pneumococcal disease

Andries J. van Tonder, J. Corander, S. Madhi, 2022, Vaccine.

Genetic Analysis of Diverse Disease-Causing Pneumococci Indicates High Levels of Diversity within Serotypes and Capsule Switching

S. Clarke, T. Mitchell, C. Dowson, 2004, Journal of Clinical Microbiology.

Risk factor profiles and clinical outcomes for children and adults with pneumococcal infections in Singapore: A need to expand vaccination policy?

M. Hibberd, S. Clarke, O. Ng, 2019, PloS one.

Isolate differences in colonization efficiency during experimental human pneumococcal challenge

S. Bentley, S. Clarke, A. Camilli, 2020, medRxiv.

Risk of red queen dynamics in pneumococcal vaccine strategy.

S. Clarke, A. Kraaijeveld, J. Webb, 2011, Trends in microbiology.

Serotype incidence and antibiotic susceptibility of Streptococcus pneumoniae causing invasive disease in Scotland, 1999-2002.

S. Clarke, B. Denham, 2005, Journal of medical microbiology.

Molecular analysis of Streptococcus pneumoniae clones causing invasive disease in children in Singapore.

S. Clarke, J. Jefferies, W. S. N. Tee, 2011, Journal of medical microbiology.

Comparative genomic epidemiology of serotype 3 IPD and carriage isolates from Southampton, UK between 2005 and 2017

S. Bentley, S. Clarke, S. Lo, 2023, Microbial genomics.

Complete Genome Sequencing of Acinetobacter baumannii AC1633 and Acinetobacter nosocomialis AC1530 Unveils a Large Multidrug-Resistant Plasmid Encoding the NDM-1 and OXA-58 Carbapenemases

S. Clarke, A. G. Alattraqchi, C. Yeo, 2021, mSphere.

Low-Dose Nitric Oxide as Targeted Anti-biofilm Adjunctive Therapy to Treat Chronic Pseudomonas aeruginosa Infection in Cystic Fibrosis

S. Rice, S. Kjelleberg, S. Clarke, 2017, Molecular therapy : the journal of the American Society of Gene Therapy.

Research investments for UK infectious disease research 1997-2013: A systematic analysis of awards to UK institutions alongside national burden of disease.

M. Head, S. Clarke, Rebecca J. Brown, 2018, The Journal of infection.

Relationships between Mucosal Antibodies, Non-Typeable Haemophilus influenzae (NTHi) Infection and Airway Inflammation in COPD

S. Clarke, T. Wilkinson, K. Ostridge, 2016, PloS one.

Development of X-ray micro-focus computed tomography to image and quantify biofilms in central venous catheter models in vitro.

P. Thurner, M. Mavrogordato, S. Clarke, 2016, Microbiology.

Meningococcal carriage in adolescents in the United Kingdom to inform timing of an adolescent vaccination strategy.

N. Kitchin, K. Jansen, S. Clarke, 2015, The Journal of infection.

Bioterrorism: an overview

S. Clarke, S. C. Clarke, 2002, British journal of biomedical science.

Title : Low dose nitric oxide as targeted anti-biofilm adjunctive therapy to 1 treat chronic Pseudomonas aeruginosa infection in cystic fibrosis 2 3

S. Rice, S. Kjelleberg, S. Clarke, 2017 .

Investigation of Upper Respiratory Carriage of Bacterial Pathogens among University Students in Kampar, Malaysia

S. Clarke, E. S. G. Cheah, Hing-Huat Ong, 2023, Tropical medicine and infectious disease.

Evaluation of swabbing methods for estimating the prevalence of bacterial carriage in the upper respiratory tract: a cross sectional study

P. Roderick, S. Clarke, S. Faust, 2014, BMJ Open.

Ecology and diversity in upper respiratory tract microbial population structures from a cross‐sectional community swabbing study

P. Roderick, S. Clarke, S. Faust, 2018, Journal of medical microbiology.

Nucleotide sequence-based typing of bacteria and the impact of automation.

S. Clarke, 2002, BioEssays : news and reviews in molecular, cellular and developmental biology.

Pre-vaccine serotype composition within a lineage signposts its serotype replacement – a carriage study over 7 years following pneumococcal conjugate vaccine use in the UK

S. Bentley, S. Clarke, S. Faust, 2017, Microbial genomics.

Drivers of year-to-year variation in exacerbation frequency of COPD: analysis of the AERIS cohort

S. Wootton, S. Clarke, E. Aris, 2019, ERJ Open Research.

Pneumococcal Serotype Prevalence in Southeast Asia: A Systematic Review and Meta-Analysis

S. Clarke, D. Cleary, E. Dombay, 2023, medRxiv.

Typing of Proteus from Patients with Bacteriuria

S. Clarke, M. McIntyre, 1996, Journal of the Royal Society of Health.

Pyrosequencing: nucleotide sequencing technology with bacterial genotyping applications

S. Clarke, 2005, Expert review of molecular diagnostics.

Visualizing variation within Global Pneumococcal Sequence Clusters (GPSCs) and country population snapshots to contextualize pneumococcal isolates

Richard J. Goater, Andries J. van Tonder, S. Madhi, 2020, Microbial genomics.

13-valent pneumococcal conjugate vaccine (PCV13)

S. Clarke, S. Faust, J. Jefferies, 2011, Human vaccines.

Current methods for capsular typing of Streptococcus pneumoniae.

M. Hibberd, S. Clarke, S. Faust, 2015, Journal of microbiological methods.

Clonal analysis of invasive pneumococcal isolates in Scotland and coverage of serotypes by the licensed conjugate polysaccharide pneumococcal vaccine: possible implications for UK vaccine policy

S. Clarke, S. M. McChlery, K. J. Scott, 2005, European Journal of Clinical Microbiology and Infectious Diseases.

The epidemiology of pneumococcal carriage and infections in Malaysia

S. Sekaran, S. Clarke, C. Le, 2012, Expert review of anti-infective therapy.

Bmc Infectious Diseases the Impact and Effectiveness of Pneumococcal Vaccination in Scotland for Those Aged 65 and over during Winter 2003/2004

Colin Simpson, S. Clarke, C. Robertson, 2022 .