H. Komori

发表

Domain swapping of the heme and N-terminal α-helix in Hydrogenobacter thermophilus cytochrome c(552) dimer.

Yoshiki Higuchi, Yugo Hayashi, Satoshi Nagao, 2012, Biochemistry.

Crystal structure of a PFU-PUL domain pair of Saccharomyces cerevisiae Doa1/Ufd3.

H. Nishimasu, H. Komori, Y. Higuchi, 2010, The Kobe journal of medical sciences.

Ubiquitin ligase activity of TFIIH and the transcriptional response to DNA damage.

R. Kornberg, T. Hunter, Dong Wang, 2005, Molecular cell.

Oligomerization enhancement and two domain swapping mode detection for thermostable cytochrome c552 via the elongation of the major hinge loop.

S. Nagao, H. Komori, Y. Higuchi, 2015, Molecular bioSystems.

Role of the C-terminal extension stacked on the re-face of the isoalloxazine ring moiety of the flavin adenine dinucleotide prosthetic group in ferredoxin-NADP(+) oxidoreductase from Bacillus subtilis.

H. Komori, T. Sakurai, Tomoya Asano, 2014, Plant physiology and biochemistry : PPB.

Activation process of [NiFe] hydrogenase elucidated by high-resolution X-ray analyses: conversion of the ready to the unready state.

H. Ogata, H. Komori, Y. Higuchi, 2005, Structure.

Formation of oligomeric cytochrome c during folding by intermolecular hydrophobic interaction between N- and C-terminal α-helices.

S. Nagao, H. Komori, Y. Higuchi, 2013, Biochemistry.

Strategic roles of axial histidines in structure formation and redox regulation of tetraheme cytochrome c3.

H. Komori, Y. Higuchi, K. Ozawa, 2008, Biochemistry.

Expression, crystallization and preliminary X-ray crystallographic study of ethanolamine ammonia-lyase from Escherichia coli.

N. Yasuoka, H. Komori, Y. Higuchi, 2010, Acta crystallographica. Section F, Structural biology and crystallization communications.

Biochemical, spectroscopic and X-ray structural analysis of deuterated multicopper oxidase CueO prepared from a new expression construct for neutron crystallography.

H. Komori, Y. Higuchi, K. Kataoka, 2016, Acta crystallographica. Section F, Structural biology communications.

Purification, crystallization and preliminary X-ray analysis of human histidine decarboxylase.

H. Komori, Y. Higuchi, Y. Nitta, 2012, Acta crystallographica. Section F, Structural biology and crystallization communications.

Crystallization and preliminary X-ray analysis of dimeric and trimeric cytochromes c from horse heart.

S. Nagao, H. Komori, Y. Higuchi, 2010, Acta crystallographica. Section F, Structural biology and crystallization communications.

X‐ray structure of a two‐domain type laccase: A missing link in the evolution of multi‐copper proteins

H. Komori, Y. Higuchi, K. Miyazaki, 2009, FEBS letters.

Crystallization and preliminary X-ray diffraction analysis of a putative two-domain-type laccase from a metagenome.

H. Komori, Y. Higuchi, K. Miyazaki, 2009, Acta crystallographica. Section F, Structural biology and crystallization communications.

Crystallization and preliminary X-ray crystallographic studies of the axin DIX domain.

Hideki Yamamoto, H. Ogata, H. Komori, 2007, Acta Crystallographica. Section F : Structural Biology and Crystallization Communications.

Crystallographic analysis of FAD-dependent glucose dehydrogenase.

H. Komori, Y. Higuchi, K. Inaka, 2015, Acta crystallographica. Section F, Structural biology communications.

Crystallization and preliminary X-ray analysis of a class II release factor RF3 from a sulfate-reducing bacterium.

H. Komori, Y. Higuchi, J. Kondo, 2008, Acta crystallographica. Section F, Structural biology and crystallization communications.

Crystallization and preliminary X-ray analysis of CooA from Carboxydothermus hydrogenoformans.

H. Komori, Y. Higuchi, Y. Ueda, 2006, Acta crystallographica. Section F, Structural biology and crystallization communications.

The N-terminal domain of the replication initiator protein RepE is a dimerization domain forming a stable dimer.

C. Wada, H. Komori, K. Miki, 2004, Biochemical and biophysical research communications.

Crystallization and preliminary X-ray analysis of the NAD+-reducing [NiFe] hydrogenase from Hydrogenophilus thermoluteolus TH-1.

M. Ishii, Y. Igarashi, H. Osuka, 2015, Acta crystallographica. Section F, Structural biology communications.

Photosensitivity of the Ni-A state of [NiFe] hydrogenase from Desulfovibrio vulgaris Miyazaki F with visible light.

S. Nagao, H. Osuka, H. Komori, 2013, Biochemical and biophysical research communications.

A single amino acid substitution converts a histidine decarboxylase to an imidazole acetaldehyde synthase.

H. Komori, Hideyuki Ito, Y. Nitta, 2020, Archives of biochemistry and biophysics.

Structure and function of the engineered multicopper oxidase CueO from Escherichia coli--deletion of the methionine-rich helical region covering the substrate-binding site.

H. Komori, Y. Higuchi, K. Kano, 2007, Journal of molecular biology.

Structural insights into the O2 reduction mechanism of multicopper oxidase.

H. Komori, Y. Higuchi, 2015, Journal of biochemistry.

JB Review Structural insights into the O 2 reduction mechanism of multicopper oxidase

H. Komori, Y. Higuchi, 2015 .

Structure and molecular evolution of multicopper blue proteins

H. Komori, Y. Higuchi, 2010, Biomolecular concepts.

Head module control of mediator interactions.

Andy Hudmon, Guillermo Calero, Roger D Kornberg, 2006, Molecular cell.

DNA apophotolyase from Anacystis nidulans: 1.8 A structure, 8-HDF reconstitution and X-ray-induced FAD reduction.

H. Komori, K. Miki, S. Adachi, 2004, Acta crystallographica. Section D, Biological crystallography.

New insights into the catalytic active-site structure of multicopper oxidases.

H. Komori, Y. Higuchi, K. Miyazaki, 2014, Acta crystallographica. Section D, Biological crystallography.

Structural Study Reveals That Ser-354 Determines Substrate Specificity on Human Histidine Decarboxylase*

H. Komori, Y. Higuchi, Y. Nitta, 2012, The Journal of Biological Chemistry.

Crystal structure of the CueO mutants at Glu506, the key amino acid located in the proton transfer pathway for dioxygen reduction.

H. Komori, Y. Higuchi, K. Kataoka, 2013, Biochemical and biophysical research communications.

An O-centered structure of the trinuclear copper center in the Cys500Ser/Glu506Gln mutant of CueO and structural changes in low to high X-ray dose conditions.

H. Komori, Y. Higuchi, K. Kataoka, 2012, Angewandte Chemie.

Structure of a conserved hypothetical protein, TTHA0849 from Thermus thermophilus HB8, at 2.4 A resolution: a putative member of the StAR-related lipid-transfer (START) domain superfamily.

S. Kuramitsu, H. Komori, Y. Higuchi, 2005, Acta crystallographica. Section F, Structural biology and crystallization communications.

Crystal structure analysis of Bacillus subtilis ferredoxin‐NADP+ oxidoreductase and the structural basis for its substrate selectivity

H. Komori, Y. Higuchi, T. Sakurai, 2010, Protein science : a publication of the Protein Society.

Crystal Structures of Ethanolamine Ammonia-lyase Complexed with Coenzyme B12 Analogs and Substrates*

N. Yasuoka, K. Mori, H. Komori, 2010, The Journal of Biological Chemistry.

Crystal structure of a prokaryotic replication initiator protein bound to DNA at 2.6 Å resolution

C. Wada, H. Komori, Y. Higuchi, 1999, The EMBO journal.

Exogenous acetate ion reaches the type II copper centre in CueO through the water-excretion channel and potentially affects the enzymatic activity.

H. Komori, Y. Higuchi, K. Kataoka, 2016, Acta crystallographica. Section F, Structural biology communications.

Revised Subunit Structure of Yeast Transcription Factor IIH (TFIIH) and Reconciliation with Human TFIIH*

R. Kornberg, H. Erdjument-Bromage, P. Tempst, 2003, Journal of Biological Chemistry.

Structural and enzymatic characterization of BacD, an L‐amino acid dipeptide ligase from Bacillus subtilis

H. Komori, Y. Higuchi, Y. Yonetani, 2012, Protein science : a publication of the Protein Society.

Human DNA Replication-related Element Binding Factor (hDREF) Self-association via hATC Domain Is Necessary for Its Nuclear Accumulation and DNA Binding*

H. Komori, Y. Higuchi, T. Osumi, 2007, Journal of Biological Chemistry.

Crystallographic characterization of the DIX domain of the Wnt signalling positive regulator Ccd1.

M. Masu, H. Komori, Y. Higuchi, 2011, Acta crystallographica. Section F, Structural biology and crystallization communications.

Roles of charged residues in pH-dependent redox properties of cytochrome c3 from Desulfovibrio vulgaris Miyazaki F

H. Ogata, H. Komori, Y. Higuchi, 2006, Biophysics.

Experimental and theoretical study on converting myoglobin into a stable domain-swapped dimer by utilizing a tight hydrogen bond network at the hinge region

S. Nagao, H. Komori, Y. Higuchi, 2021, RSC advances.

Crystal structure of thermostable DNA photolyase: Pyrimidine-dimer recognition mechanism

S. Yokoyama, T. Shibata, R. Masui, 2001, Proceedings of the National Academy of Sciences of the United States of America.

Crystal structure of TTHA1657 (AT‐rich DNA‐binding protein; p25) from Thermus thermophilus HB8 at 2.16 Å resolution

H. Komori, K. Miki, A. Kita, 2006, Proteins.

Crystal structure of a hypothetical protein, TTHA0829 from Thermus thermophilus HB8, composed of cystathionine-β-synthase (CBS) and aspartate-kinase chorismate-mutase tyrA (ACT) domains

S. Kuramitsu, H. Komori, Y. Higuchi, 2016, Extremophiles.

Domain-Swapped Dimer of Pseudomonas aeruginosa Cytochrome c 551: Structural Insights into Domain Swapping of Cytochrome c Family Proteins

S. Nagao, H. Osuka, H. Komori, 2015, PloS one.

Cytochrome c polymerization by successive domain swapping at the C-terminal helix

S. Nagao, H. Komori, Y. Higuchi, 2010, Proceedings of the National Academy of Sciences.

Crystal structures of hydrogenase maturation protein HypE in the Apo and ATP-bound forms.

Yoshiki Higuchi, H. Komori, Y. Higuchi, 2007, Journal of molecular biology.

Formation of domain-swapped oligomer of cytochrome C from its molten globule state oligomer.

S. Nagao, H. Komori, Y. Higuchi, 2014, Biochemistry.

Change in structure and ligand binding properties of hyperstable cytochrome c555 from Aquifex aeolicus by domain swapping

S. Nagao, H. Komori, Y. Higuchi, 2015, Protein science : a publication of the Protein Society.

Positively charged residues located downstream of PIP box, together with TD amino acids within PIP box, are important for CRL4Cdt2‐mediated proteolysis

T. Ishii, H. Komori, Y. Higuchi, 2011, Genes to Cells.

Domain swapping oligomerization of thermostable c-type cytochrome in E. coli cells

Yugo Hayashi, S. Nagao, H. Komori, 2016, Scientific Reports.

Structural Study Reveals That Ser-354 Determines Substrate Specificity on Human Histidine Decarboxylase*

H. Komori, Y. Higuchi, Y. Nitta, 2012, The Journal of Biological Chemistry.

Short Article Ubiquitin Ligase Activity of TFIIH and the Transcriptional Response to DNA Damage

R. Kornberg, T. Hunter, Dong Wang, 2005 .