N. Tanaka

发表

Structural basis of the substrate subsite and the highly thermal stability of xylanase 10B from Thermotoga maritima MSB8

Takashi Kumasaka, Tomonori Kaneko, Nobuo Tanaka, 2005, Proteins.

Domain Motion in 3-isopropylmalate dehydrogenase: A Strategy to Enhance its Thermal Stability

T. Oshima, N. Tanaka, Z. Nurachman, 2003 .

Medium temperature, 310 K, provides single crystals of orotate phosphoribosyltransferase from Thermus thermophilus.

N. Tanaka, T. Shinozawa, H. Hamana, 1999, Acta crystallographica. Section D, Biological crystallography.

Structure of 3-isopropylmalate dehydrogenase in complex with 3-isopropylmalate at 2.0 A resolution: the role of Glu88 in the unique substrate-recognition mechanism.

K Namba, K. Namba, N. Tanaka, 1998, Structure.

Three-dimensional structure of a highly thermostable enzyme, 3-isopropylmalate dehydrogenase of Thermus thermophilus at 2.2 A resolution.

Y. Katsube, T. Oshima, N. Tanaka, 1991, Journal of molecular biology.

Ligand-induced changes in the conformation of 3-isopropylmalate dehydrogenase from Thermus thermophilus.

T. Oshima, N. Tanaka, H. Moriyama, 1995, Journal of biochemistry.

A stable intermediate in the thermal unfolding process of a chimeric 3‐isopropylmalate dehydrogenase between a thermophilic and a mesophilic enzymes

T. Oshima, A. Yamagishi, N. Tanaka, 1996, Protein science : a publication of the Protein Society.

Crystallization and preliminary X-ray studies on the reaction center-light-harvesting 1 core complex from Rhodopseudomonas viridis.

K. Harata, T. Kumasaka, Takao Sato, 2005, Acta crystallographica. Section F, Structural biology and crystallization communications.

Enhancement in the perfection of orthorhombic lysozyme crystals grown in a high magnetic field (10 T).

N. Tanaka, Y. Matsuura, K. Nakajima, 2000, Acta crystallographica. Section D, Biological crystallography.

Structure of bonito heart ferricytochrome c and some remarks on molecular interaction in its crystalline state.

Y. Hata, N. Tanaka, Y. Matsuura, 1979, Journal of biochemistry.

Structural analysis of the myoglobin reconstituted with iron porphine.

N. Tanaka, S. Neya, N. Funasaki, 1994, The Journal of biological chemistry.

Structure and function of 6,7-dicarboxyheme-substituted myoglobin.

K. Imai, N. Tanaka, S. Neya, 1998, Biochemistry.

The 2.0 Å Crystal Structure of Cyanide Metmyoglobin Reconstituted with 5,10,15,20-Tetrapropylhemin

Y. Hata, Y. Katsube, Takao Sato, 1991 .

Effect of polar side chains at position 172 on thermal stability of 3‐isopropylmalate dehydrogenase from Thermus thermophilus

S. Akanuma, T. Oshima, A. Yamagishi, 1997, FEBS letters.

A High-Speed Data-Collection System for Large-Unit-Cell Crystals using an Imaging Plate as a Detector

Y. Katsube, N. Tanaka, K. Imada, 1992 .

Stopped-Flow Small-Angle X-Ray Scattering Study on the Acid-Denaturation of Taka-Amylase A

N. Kasai, Mitsunori Kato, Y. Hata, 1986 .

Molecular organization of a high molecular weight multi-protease complex from rat liver.

A. Ikai, K. Tanaka, Y. Katsube, 1988, Journal of molecular biology.

Structure and heme environment of beef liver catalase at 2.5 A resolution

T. J. Reid, M. Murthy, M. Rossmann, 1981 .

Molecular structure of taka-amylase A. I. Backbone chain folding at 3 A resolution.

N. Yasuoka, N. Tanaka, Y. Matsuura, 1980, Journal of biochemistry.

Low resolution crystal structures of Taka-amylase A and its complexes with inhibitors.

N. Tanaka, Y. Matsuura, M. Kusunoki, 1979, Journal of biochemistry.

Crystallization and preliminary X-ray studies of xylanase 10B from Thermotoga maritima.

T. Kaneko, T. Kumasaka, Ihsanawati, 2003, Acta crystallographica. Section D, Biological crystallography.

Small-angle X-ray scattering study of cytochrome oxidase from beef heart and its complex with cytochrome c using contrast variation method

Y. Katsube, N. Tanaka, T. Ozawa, 1991 .

Molecular structure of [Zn(OCH2CH2OMe)2·(EtZnOCH2CH2OMe)6]. An enantiomorphic catalyst for the stereoselective polymerization of methyloxirane

N. Kasai, T. Tsuruta, N. Tanaka, 1982 .

Crystallization and preliminary X-ray studies of V(1)-ATPase of Thermus thermophilus HB8 complexed with Mg-ADP.

N. Tanaka, N. Ishii, S. Saijo, 2001, Journal of structural biology.

Population Analysis of (R)-Thiazolidine-4-carboxylic Acid

T. Ashida, N. Tanaka, Y. Matsuura, 1979 .

Crystallization and preliminary X-ray diffraction studies of the hyperthermophilic archaeal sulredoxin having the unique Rieske [2Fe-2S] cluster environment.

T. Uchiyama, T. Kumasaka, Takao Sato, 2004, Acta crystallographica. Section D, Biological crystallography.

Crystallization and preliminary crystallographic analysis of endo-1,3-beta-glucanase from alkaliphilic Nocardiopsis sp. strain F96.

T. Kumasaka, Satoshi Nakamura, N. Tanaka, 2006, Acta crystallographica. Section F, Structural biology and crystallization communications.

Crystallization and preliminary X-ray crystallographic analysis of chitinase F1 (ChiF1) from the alkaliphilic Nocardiopsis sp. strain F96.

T. Matsui, T. Kumasaka, Takao Sato, 2004, Acta crystallographica. Section D, Biological crystallography.

Crystallization and preliminary X-ray analysis of catalase-peroxidase from the halophilic archaeon Haloarcula marismortui.

N. Tanaka, N. Igarashi, S. Saijo, 2001, Acta crystallographica. Section D, Biological crystallography.

Crystallographic study of endogenous α-amylase inhibitor from wheat

H. Matsubara, Y. Hata, Y. Katsube, 1987 .

Preliminary x-ray studies on Pseudomonas isoamylase.

N. Kasai, N. Tanaka, M. Sato, 1982, Journal of molecular biology.

Preliminary crystallographic data for adenylosuccinate synthetase from rabbit skeletal muscle.

N. Tanaka, Y. Matsuura, M. Kakudo, 1979, Journal of molecular biology.

Crystallographic data and circular dichroism spectrum of lipase from Geotrichum candidum link.

A. Sugihara, Y. Tominaga, N. Tanaka, 1975, Journal of molecular biology.

Single crystals of (Pro-Pro-Gly) 10, a synthetic polypeptide model of collagen.

K. Okuyama, T. Ashida, N. Tanaka, 1972, Journal of molecular biology.

Main chain fold of a [2Fe-2S]ferredoxin I from Aphanothece sacrum at 2.5 A resolution.

T. Tsukihara, H. Matsubara, Y. Katsube, 1983, Journal of biochemistry.

STRUCTURE OF 3-ISOPROPYLMALATE DEHYDROGENASE

S. Akanuma, T. Oshima, N. Tanaka, 1997 .

Isolation and structure of the novel dihydroxamate siderophore alcaligin

J. Oda, Y. Katsube, N. Tanaka, 1988 .

Crystallization and preliminary X-ray studies of a Bacillus subtilis and Thermus thermophilus HB8 chimeric 3-isopropylmalate dehydrogenase.

Y. Katsube, T. Oshima, N. Tanaka, 1991, Journal of biochemistry.

Preparation, x-ray molecular structure determination, and chemical properties of dinitrogen-coordinated cobalt complexes containing triphenylphosphine ligands and alkali metal or magnesium. Protonation of the coordinated dinitrogen to ammonia and hydrazine

N. Kasai, N. Tanaka, K. Miki, 1983 .

Small-angle x-ray scattering study of insect lipophorin.

N. Tanaka, M. Sato, C. Katagiri, 1987, The Journal of biological chemistry.

Crystal Structure of N-Acetylkynurenine

N. Tanaka, Y. Matsuura, M. Kakudo, 1979 .

STRUCTURE OF BACILLUS PUMILUS XYLANASE

H. Yamaguchi, Y. Hata, Y. Katsube, 1988 .

Crystallization and preliminary X-ray studies of Bacillus pumilus IPO xylanase.

H. Yamaguchi, Y. Hata, Y. Katsube, 1987, Journal of molecular biology.

The crystal and molecular structure of (acetylacetonato)-(diacetylmethyl)(diethylamine)palladium(II).

N. Kasai, N. Tanaka, K. Miki, 1982 .

Kinetic resolution of racemic .alpha.-methylbenzyl methacrylate: asymmetric selective polymerization catalyzed by Grignard reagent-(-)-sparteine derivative complexes

T. Kitayama, N. Kasai, N. Tanaka, 1982 .

The Molecular Structure of Bromo(ethyl)[(−)-sparteine]magnesium(II), a Catalyst for the Asymmetric-selective Polymerization of Racemic Methacrylates

N. Kasai, N. Tanaka, K. Miki, 1983 .

Structure of beef liver catalase.

T. J. Reid, M. Murthy, M. Rossmann, 1981, Journal of molecular biology.

Structure Analysis of a Collagen Model Polypeptide, (Pro–Pro–Gly)10

K. Okuyama, T. Ashida, N. Tanaka, 1976 .

Structure of S. platensis [2Fe-2S] ferredoxin and evolution of chloroplast-type ferredoxins

T. Tsukihara, H. Matsubara, Y. Katsube, 1980, Nature.

The crystal structure of riboflavin hydrobromide monohydrate.

T. Ashida, N. Tanaka, M. Kakudo, 1967, Bulletin of the Chemical Society of Japan.

The 2.8 Å structure of hydroxylamine oxidoreductase from a nitrifying chemoautotrophic bacterium, Nitrosomonas europaea

Noriyuki Igarashi, Nobuo Tanaka, N. Tanaka, 1997, Nature Structural Biology.

X-Ray Analysis of a [2Fe-2S] Ferredoxin from ‘Spirulina platensis. Main Chain Fold and Location of Side Chains at 2.5 Å Resolution

Masao Kakudo, Hiroshi Matsubara, Masahiro Nakamura, 1981 .

X-ray analysis of ferredoxin from Spirulina platensis. II. Chelate structure of active center.

T. Tsukihara, H. Matsubara, Y. Katsube, 1978, Journal of biochemistry.

Structure of rice ferricytochrome c at 2.0 A resolution.

Y. Hata, N. Tanaka, M. Kakudo, 1983, Journal of molecular biology.

Structure and heme environment of beef liver catalase at 2.5 A resolution.

T. J. Reid, M. Murthy, M. Rossmann, 1981, Proceedings of the National Academy of Sciences of the United States of America.

Site Integrity Insights into Active and Substrate Binding a Norovirus Protease Structure Provides Supplemental Material

T. Kumasaka, Masaki Yamamoto, Takao Sato, 2022 .

The crystal and molecular structure of phenyl α‐maltoside

I. Tanaka, T. Ashida, N. Tanaka, 1976 .

An x-ray study of the synthetic polypeptide (Pro-Pro-Gly) 10 .

K. Okuyama, T. Ashida, N. Tanaka, 1972, Journal of molecular biology.

Crystal structure of the pyridoxal 5'-phosphate dependent L-methionine gamma-lyase from Pseudomonas putida.

M. Furuichi, T. Kumasaka, H. Inoue, 2002, Journal of biochemistry.

Structure of 2‐deoxy‐scyllo‐inosose synthase, a key enzyme in the biosynthesis of 2‐deoxystreptamine‐containing aminoglycoside antibiotics, in complex with a mechanism‐based inhibitor and NAD+

T. Kumasaka, E. Nango, N. Tanaka, 2007, Proteins.

The 1.48 A resolution crystal structure of the homotetrameric cytidine deaminase from mouse.

M. Kimura, T. Kumasaka, Masaki Yamamoto, 2006, Biochemistry.

Crystallization and X-ray analysis of 2-deoxy-scyllo-inosose synthase, the key enzyme in the biosynthesis of 2-deoxystreptamine-containing aminoglycoside antibiotics.

T. Kumasaka, E. Nango, Takao Sato, 2005, Acta crystallographica. Section F, Structural biology and crystallization communications.

Structure of a new 'aspzincin' metalloendopeptidase from Grifola frondosa: implications for the catalytic mechanism and substrate specificity based on several different crystal forms.

T. Hori, T. Kumasaka, N. Tanaka, 2001, Acta crystallographica. Section D, Biological crystallography.

Thermostabilization of a chimeric enzyme by residue substitutions: four amino acid residues in loop regions are responsible for the thermostability of Thermus thermophilus isopropylmalate dehydrogenase.

T. Oshima, N. Tanaka, Y. Hayashi-Iwasaki, 2001, Biochimica et biophysica acta.

Structural insight of human DEAD‐box protein rck/p54 into its substrate recognition with conformational changes

Y. Akao, T. Matsui, T. Kumasaka, 2006, Genes to cells : devoted to molecular & cellular mechanisms.

The 2.0 Å crystal structure of catalase-peroxidase from Haloarcula marismortui

Takao Sato, N. Tanaka, Yusuke Yamada, 2002, Nature Structural Biology.

A unique dye-decolorizing peroxidase, DyP, from Thanatephorus cucumeris Dec 1: heterologous expression, crystallization and preliminary X-ray analysis.

Takao Sato, N. Tanaka, G. Sazaki, 2004, Acta crystallographica. Section D, Biological crystallography.

Improvement of Alkaliphily of Bacillus Alkaline Xylanase by Introducing Amino Acid Substitutions Both on Catalytic Cleft and Protein Surface

T. Kumasaka, T. Fukui, Ihsanawati, 2009, Bioscience, biotechnology and biochemistry.

Structure of bovine carbonic anhydrase II at 1.95 A resolution.

Atsushi Ikai, Nobuo Tanaka, A. Ikai, 2004, Acta crystallographica. Section D, Biological crystallography.

Crystal structures and enzymatic properties of a triamine/agmatine aminopropyltransferase from Thermus thermophilus.

T. Kumasaka, T. Oshima, Takao Sato, 2011, Journal of molecular biology.

Structural Insight into Modest Binding of a Non-PXXP Ligand to the Signal Transducing Adaptor Molecule-2 Src Homology 3 Domain*

T. Kaneko, K. Miyazawa, T. Kumasaka, 2003, Journal of Biological Chemistry.

Crystal structure of H2-proteinase from the venom of Trimeresurus flavoviridis.

T. Kumasaka, Y. Katsube, N. Tanaka, 1996, Journal of biochemistry.

Crystalline bovine liver catalase.

M. Rossmann, N. Tanaka, W. Eventoff, 1976, Journal of molecular biology.

Serial increase in the thermal stability of 3‐isopropylmalate dehydrogenase from Bacillus subtilis by experimental evolution

S. Akanuma, T. Oshima, A. Yamagishi, 1998, Protein science : a publication of the Protein Society.

The Structure of Beef Liver Catalase

T. J. Reid, M. Murthy, M. Rossmann, 1982 .

Benzyloxycarbonylglycyl-l-proline

I. Tanaka, T. Ashida, N. Tanaka, 1977 .

Precipitation diagram and optimization of crystallization conditions at low ionic strength for deglycosylated dye-decolorizing peroxidase from a basidiomycete.

Takao Sato, N. Tanaka, Y. Sugano, 2005, Acta crystallographica. Section F, Structural biology and crystallization communications.

Crystallization and preliminary X-ray studies on the hyperstable 3-isopropylmalate dehydrogenase from the thermoacidophilic archaeon Sulfolobus sp. strain 7.

T. Suzuki, T. Oshima, N. Tanaka, 1998, Acta crystallographica. Section D, Biological crystallography.

Crystal structures of RsbQ, a stress‐response regulator in Bacillus subtilis

T. Kaneko, T. Kumasaka, N. Tanaka, 2005, Protein science : a publication of the Protein Society.

Kumasaka subtilis BacillusCrystal structures of RsbQ , a stress-response regulator in

Takashi, T. Kaneko, N. Tanaka, 2005 .

Further improvement of the thermal stability of a partially stabilized Bacillus subtilis 3-isopropylmalate dehydrogenase variant by random and site-directed mutagenesis.

S. Akanuma, T. Oshima, A. Yamagishi, 1999, European journal of biochemistry.

Systematic analysis of supersaturation and lysozyme crystal quality.

I Yoshizaki, N. Tanaka, S. Yoda, 2001, Acta crystallographica. Section D, Biological crystallography.

A tumour‐associated DEAD‐box protein, rck/p54 exhibits RNA unwinding activity toward c‐myc RNAs in vitro

Tsutomu Matsui, Kenji Matsumoto, Nobuo Tanaka, 2003, Genes to cells : devoted to molecular & cellular mechanisms.

Novel zinc-binding centre in thermoacidophilic archaeal ferredoxins

Y. Hata, T. Oshima, N. Tanaka, 1996, Nature Structural Biology.

Crystallization and a 5 A X-ray diffraction study of Aphanothece sacrum ferredoxin.

T. Tsukihara, H. Matsubara, Y. Katsube, 1978, Journal of biochemistry.

The Crystal and Molecular Structure of N-Carboxy Anhydride of Glycine

N. Tanaka, Y. Matsuura, M. Kakudo, 1976 .

The Crystal and Molecular Structure of Sterigmatin, A Metabolite of Aspergillus versicolor

T. Tsukihara, T. Ashida, Y. Katsube, 1975 .

The Crystal and Molecular Structure of the p -Bromobenzoate of Sterigmatocystin

T. Tsukihara, Y. Katsube, N. Tanaka, 1975 .

Structure Analysis of p -Bromobenzoate of Sterigmatocystin by X-ray Diffraction Method

Y. Katsube, N. Tanaka, T. Hamasaki, 1970 .

CRYSTAL AND MOLECULAR STRUCTURE OF THE P-BROMOBENZOATE OF STERIGMATOCYSTIN

T. Tsukihara, Y. Katsube, N. Tanaka, 1975 .

The Crystal and Molecular Structure of Averufin

T. Tsukihara, Y. Katsube, N. Tanaka, 1972 .

The Crystal Structure of m-Bromobenzoic Acid

T. Ashida, N. Tanaka, M. Kakudo, 1967 .

Kinetic studies on CO binding to reconstituted myoglobins with four synthetic hemes; structural control in ligand binding to myoglobin.

N. Tanaka, S. Neya, N. Funasaki, 1992, Biochimica et biophysica acta.

The crystal structures of cyanide metmyoglobins reconstituted with iron(III) complexes of porphyrin, 5,10,15,20-tetramethylporphyrin, and 5,10,15,20-tetraethylporphyrin

Takao Sato, N. Tanaka, H. Moriyama, 1992 .

The initial step of the thermal unfolding of 3-isopropylmalate dehydrogenase detected by the temperature-jump Laue method.

T. Oshima, N. Tanaka, Y. Hayashi-Iwasaki, 2000, Protein engineering.

The Micro-Computer Programs for the Automated Crystal Structure Analysis

T. Ashida, Y. Katsube, N. Tanaka, 1989 .

Three-dimensional structure of Cu,Zn-superoxide dismutase from spinach at 2.0 A resolution.

K. Asada, Y. Hata, Y. Katsube, 1991, Journal of biochemistry.

Amino acid sequence of copper,zinc-superoxide dismutase from spinach leaves.

K. Asada, Y. Katsube, N. Tanaka, 1986, Journal of biochemistry.

The crystal structure of bonito (katsuo) ferrocytochrome c at 2.3 A resolution. II. Structure and function.

T. Tsukihara, T. Yamane, T. Ashida, 1976, Journal of biochemistry.

The crystal structure of bonito (Katsuo) ferrocytochrome c at 2.3 A resolution.

T. Tsukihara, T. Yamane, T. Ashida, 1971, Journal of biochemistry.

The crystal structure of bis(acetylacetonato)platinum(II) benzene solvate.

Y. Kai, N. Kasai, N. Tanaka, 1981 .

Structure of Streptomyces erythraeus lysozyme at 6 A resolution.

N. Tanaka, M. Kakudo, S. Harada, 1979, Journal of biochemistry.

The crystal structure of zinc-containing ferredoxin from the thermoacidophilic archaeon Sulfolobus sp. strain 7.

Y. Hata, T. Oshima, N. Tanaka, 1997, Biochemistry.

Structural consequences of hen egg-white lysozyme orthorhombic crystal growth in a high magnetic field: validation of X-ray diffraction intensity, conformational energy searching and quantitative analysis of B factors and mosaicity.

Takao Sato, N. Tanaka, Y. Matsuura, 2005, Acta crystallographica. Section D, Biological crystallography.

Oxidation of a ferrocytochrome c in the crystalline state--structural change and anion binding.

T. Tsukihara, T. Yamane, T. Ashida, 1973, Journal of biochemistry.

The crystal structures of mutated 3-isopropylmalate dehydrogenase from Thermus thermophilus HB8 and their relationship to the thermostability of the enzyme.

Y. Katsube, T. Oshima, N. Tanaka, 1995, Journal of biochemistry.

Distinction between Cu2+ and Zn2+ ions in a crystal of spinach superoxide dismutase by use of anomalous dispersion and tuneable synchrotron radiation

Y. Satow, Y. Hata, Y. Katsube, 1987 .

Low resolution crystal structure of lipase from Geotrichum candidum (ATCC34614).

A. Sugihara, Y. Hata, N. Tanaka, 1979, Journal of biochemistry.

Crystal structures of mutants of Thermus thermophilus IPMDH adapted to low temperatures.

T. Suzuki, T. Oshima, A. Yamagishi, 2001, Protein engineering.

Crystal structures of 3-isopropylmalate dehydrogenases with mutations at the C-terminus: crystallographic analyses of structure-stability relationships.

S. Akanuma, Takao Sato, N. Tanaka, 2000, Protein engineering.

Spontaneous tandem sequence duplications reverse the thermal stability of carboxyl-terminal modified 3-isopropylmalate dehydrogenase

S. Akanuma, T. Oshima, A. Yamagishi, 1996, Journal of bacteriology.

The crystal structure of thermostable mutants of chimeric 3-isopropylmalate dehydrogenase, 2T2M6T.

T. Oshima, A. Yamagishi, N. Tanaka, 1995, Protein engineering.

A mutation at the interface between domains causes rearrangement of domains in 3-isopropylmalate dehydrogenase.

S. Akanuma, T. Oshima, N. Tanaka, 1997, Protein engineering.

Structures and Thermostability of Enzymes

N. Tanaka, 2002 .

Three-dimensional structures of chimeric enzymes between Bacillus subtilis and Thermus thermophilus 3-isopropylmalate dehydrogenases.

Y. Katsube, T. Oshima, N. Tanaka, 1994, Protein engineering.

Crystallization and X-ray analysis of the N-terminal core domain of a tumour-associated human DEAD-box RNA helicase, rck/p54.

Y. Akao, T. Matsui, T. Kumasaka, 2004, Acta crystallographica. Section D, Biological crystallography.

A Norovirus Protease Structure Provides Insights into Active and Substrate Binding Site Integrity

T. Kumasaka, Takao Sato, N. Tanaka, 2005, Journal of Virology.