J. Vanderkooi

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Melittin as model system for probing interactions between proteins and cyclodextrins

Vikas Nanda, Mazdak Khajehpour, T. Troxler, 2004, Proteins.

Use of IR absorption of the carboxyl group of amino acids and their metabolites to determine pKs, to study proteins, and to monitor enzymatic activity

J. Vanderkooi, W. W. Wright, 1997 .

Imaging of phosphorescence: a novel method for measuring oxygen distribution in perfused tissue.

W. Rumsey, J. Vanderkooi, D. Wilson, 1988, Science.

Influence of the pH on the pocket field of cytochrome c type proteins

J. Vanderkooi, J. Friedrich, M. Laberge, 1997 .

Diffusion in two dimensions: Comparison between diffusional fluorescence quenching in phospholipid vesicles and in isotropic solution

F. Podo, J. Vanderkooi, C. Owen, 1975 .

Excited triplet states used to study biological macromolecules at room temperature.

J W Berger, J. Berger, J. Vanderkooi, 1989, Biochimica et biophysica acta.

Site-selected fluorescence spectra of porphyrin derivatives of heme proteins.

V. Moy, J. Vanderkooi, K. Paul, 1985, Biochemistry.

Metallocytochromes c: characterization of electronic absorption and emission spectra of Sn4+ and Zn2+ cytochromes c.

M. Erecińska, J. Vanderkooi, F. Adar, 1976, European journal of biochemistry.

Cytochrome c Interaction with Membranes

M. Erecińska, J. Vanderkooi, M. Erecínska, 1975 .

Fluorescence energy transfer between Ca2+ transport ATPase molecules in artificial membranes.

J. Vanderkooi, A. Martonosi, J M Vanderkooi, 1977, Biochemistry.

An optical method for measurement of dioxygen concentration based upon quenching of phosphorescence.

J. Vanderkooi, D. Wilson, D F Wilson, 1987, The Journal of biological chemistry.

Flexibility in Proteins: Tuning the Sensitivity to O2 Diffusion by Varying the Lifetime of a Phosphorescent Sensor in Horseradish Peroxidase¶

S. Vinogradov, J. Vanderkooi, B. Zelent, 2004, Photochemistry and photobiology.

Mirror image forms of snow flea antifreeze protein prepared by total chemical synthesis have identical antifreeze activities.

J. Vanderkooi, S. Kent, B. Pentelute, 2008, Journal of the American Chemical Society.

Cytochrome c interactions with membranes. A photoaffinity-labeled cytochrome c.

M. Erecińska, J. Vanderkooi, D. Wilson, 1975, Archives of biochemistry and biophysics.

Thermal stability of glucokinase (GK) as influenced by the substrate glucose, an allosteric glucokinase activator drug (GKA) and the osmolytes glycerol and urea.

A. Wand, J. Vanderkooi, C. Buettger, 2012, Biochimica et biophysica acta.

Infrared absorption study of the heme pocket dynamics of carbonmonoxyheme proteins.

J. Vanderkooi, S. Stavrov, A. Kaposi, 2006, Biophysical journal.

Solvent dependent and independent motions of CO-horseradish peroxidase examined by infrared spectroscopy and molecular dynamics calculations.

K. Sharp, J. Vanderkooi, W. W. Wright, 2003, Biophysical chemistry.

Influence of static and dynamic disorder on the visible and infrared absorption spectra of carbonmonoxy horseradish peroxidase.

J. Vanderkooi, W. W. Wright, S. Stavrov, 2001, Biophysical journal.

Mutational analysis of allosteric activation and inhibition of glucokinase.

C. Stanley, J. Vanderkooi, J. Bass, 2011, The Biochemical journal.

Cytochrome c interaction with membranes. The enthalpy of oxidation of cytochromes c, c2, and a1,2.

M. Erecińska, J. Vanderkooi, M. Erecínska, 1975, Archives of biochemistry and biophysics.

Cytochrome c interaction with membranes. I. Use of a fluorescent chromophore in the study of cytochrome c interaction with artificial and mitochondrial membranes.

B. Chance, M. Erecińska, J. Vanderkooi, 1973, Archives of biochemistry and biophysics.

Conformational relaxation of a low-temperature protein as probed by photochemical hole burning. Horseradish peroxidase.

J. Vanderkooi, J. Fidy, J. Zollfrank, 1991, Biophysical journal.

Photochemical holes under pressure: Compressibility and volume fluctuations of a protein

J. Vanderkooi, J. Fidy, J. Zollfrank, 1991 .

Carbohydrate intramolecular hydrogen bonding cooperativity and its effect on water structure.

K. Sharp, J. Vanderkooi, J. L. Dashnau, 2005, The journal of physical chemistry. B.

Phosphate Assisted Proton Transfer in Water and Sugar Glasses: A Study Using Fluorescence of Pyrene-1-carboxylate and IR Spectroscopy

J. Vanderkooi, I. Gryczynski, Z. Gryczynski, 2008, Journal of Fluorescence.

Electron paramagnetic resonance of the excited triplet state of metal-free and metal-substituted cytochrome c.

J. Vanderkooi, P. Angiolillo, 1995, Biophysical journal.

Water-induced relaxation of a degenerate vibration of guanidinium using 2D IR echo spectroscopy.

R. Hochstrasser, J. Vanderkooi, D. Kuroda, 2010, The journal of physical chemistry. B.

Hydrogen bonding and the cryoprotective properties of glycerol/water mixtures.

K. Sharp, J. Vanderkooi, Nathaniel V Nucci, 2006, The journal of physical chemistry. B.

Experiments with proteins at low temperature: what do we learn on properties in their functional state?

J. Vanderkooi, J. Friedrich, J. Wiedersich, 2007, The Journal of chemical physics.

Physics of Proteins at Low Temperature

J. Vanderkooi, J. Friedrich, A. Burin, 2004, cond-mat/0407378.

Conformational dynamics of a low temperature protein: Free base cytochrome-c

J. Vanderkooi, J. Friedrich, K. Fritsch, 1999 .

Cytochrome c interaction with membranes. Interaction of cytochrome c with isolated membrane fragments and purified enzymes.

M. Erecińska, J. Vanderkooi, M. Erecínska, 1974, Archives of biochemistry and biophysics.

Tryptophan Fluorescence Yields and Lifetimes as a Probe of Conformational Changes in Human Glucokinase

J. Vanderkooi, F. Matschinsky, Pan Chen, 2017, Journal of Fluorescence.

Oxygen diffusion in biological and artificial membranes determined by the fluorochrome pyrene

J. Vanderkooi, S. Fischkoff, 1975, The Journal of general physiology.

Reactions of excited triplet states of metal substituted myoglobin with dioxygen and quinone.

J. Vanderkooi, G. Holtom, C. Owen, 1990, Biophysical journal.

Water structure in vitro and within Saccharomyces cerevisiae yeast cells under conditions of heat shock.

H. Nelson, L. Conlin, J. Vanderkooi, 2008, Biochimica et biophysica acta.

Oxygen gradients in mitochondria examined with delayed luminescence from excited-state triplet probes.

M. Erecińska, J. Vanderkooi, W. W. Wright, 1990, Biochemistry.

Study of the active site of horseradish peroxidase isoenzymes A and C by luminescence

J. Vanderkooi, K. Paul, T. Horie, 1985 .

Excited states of tryptophan in cod parvalbumin. Identification of a short-lived emitting triplet state at room temperature.

J. Vanderkooi, S. Williams, C. M. Phillips, 1993, Biophysical journal.

Optical Spectra of Fe(II) Cytochrome c Interpreted Using Molecular Dynamics Simulations and Quantum Mechanical Calculations

K. Sharp, J. Vanderkooi, W. W. Wright, 2002 .

Metal-free and metal-substituted cytochromes c. Use in characterization of the cytochrome c binding site.

J. Vanderkooi, R. Landesberg, C. Owen, 1977, European journal of biochemistry.

Cytochrome c interaction with membranes. II. Comparative study of the interaction of c cytochromes with the mitochondrial membrane.

B. Chance, M. Erecińska, J. Vanderkooi, 1973, Archives of biochemistry and biophysics.

Optical and IR absorption as probe of dynamics of heme proteins.

J. Vanderkooi, W. W. Wright, S. Stavrov, 2002, Biopolymers.

An aryl azide suitable for photoaffinity labeling of amine groups in proteins.

M. Erecińska, J. Vanderkooi, D. Wilson, 1975, Archives of biochemistry and biophysics.

Temperature dependence of 1,6-diphenyl-1,3,5-hexatriene fluorescence in phophoslipid artificial membranes.

J. Vanderkooi, M. Andrich, 1976, Biochemistry.

Protein-induced changes in nonplanarity of the porphyrin in nickel cytochrome c probed by resonance Raman spectroscopy.

W. Jentzen, J. Vanderkooi, J. Shelnutt, 1998, Biochemistry.

Microsecond luminescence emission from copper cytochrome c.

B. Chance, J. Vanderkooi, P. Glatz, 1979, Biochemistry.

Luminescence of Cu‐cytochrome c

B. Chance, A. Waring, J. Vanderkooi, 1978, FEBS Letters.

Softening of the packing density of horseradish peroxidase by a H-donor bound near the heme pocket.

J. Vanderkooi, J. Friedrich, J. Fidy, 1992, Biophysical journal.

Changes in membrane fluidity associated with lymphocyte stimulation by succinyl-concanavalin A.

J. Vanderkooi, C. Deutsch, S. Cherenkevich, 1982, Biochimica et biophysica acta.

Water channel of horseradish peroxidase studied by the charge-transfer absorption band of ferric heme

K. Sharp, J. Vanderkooi, B. Zelent, 2004 .

Fluorescence line narrowing study of the ground-state and first-excited-state vibrational frequencies of Sn and Zn cytochromes c

J. Vanderkooi, M. Laberge, 1995 .

Triplet absorption and phosphorescence emission in zinc cytochrome c

A. Waring, J. Vanderkooi, S. Dixit, 1981, FEBS letters.

Temperature sensitivity of fluorescence probes in the presence of model membranes and mitochondria

B. Chance, J. Vanderkooi, 1972, FEBS letters.

Tryptophan phosphorescence of the Ca2+-ATPase of sarcoplasmic reticulum.

J. Vanderkooi, A. Martonosi, S. Pikula, 1988, Biochimica et biophysica acta.

Mobility of fluorescent derivatives of cytochrome c in mitochondria

M. Erecińska, J. Vanderkooi, G. Maniara, 1985, The Journal of cell biology.

Physical properties of biological membranes determined by the fluorescence of the calcium ionophore A23187.

J. Vanderkooi, A. Scarpa, G. Case, 1974, Archives of biochemistry and biophysics.

Physics of Proteins at Low Temperature

J. Vanderkooi, J. Friedrich, A. Burin, 2004, cond-mat/0407378.

Subzero temperature study of the inner mitochondrial membrane and related phospholipid membrane systems with the fluorescent probe, trans-parinaric acid.

A. Waring, J. Vanderkooi, P. Glatz, 1979, Biochimica et biophysica acta.

Application of pulsed-gradient Fourier transform nuclear magnetic resonance to the study of self-diffusion of phospholipid vesicles.

J. Vanderkooi, G. Mcdonald, 1975, Biochemistry.

Products of Excited State Molecules: Evidence for Hydrogen Atom Generation Within a Protein

J. Vanderkooi, P. Angiolillo, 1996, Biomedical Optical Spectroscopy and Diagnostics.

Mixed trehalose/sucrose glasses used for protein incorporation as studied by infrared and optical spectroscopy.

J. Vanderkooi, W. W. Wright, Juan Carlos Báez, 2002, Analytical biochemistry.

Characterization of lens alpha-crystallin tryptophan microenvironments by room temperature phosphorescence spectroscopy.

J. Berger, J. Vanderkooi, 1989, Biochemistry.

Phosphorescence of tryptophan from parvalbumin and actin in liquid solution

J. Vanderkooi, T. Horie, 1982, FEBS letters.

Stark effect experiments in cytochrome c-type proteins: structural hierarchies.

J. Vanderkooi, J. Friedrich, M. Laberge, 1996, Biophysical journal.

The lipid integrity of membranes of guinea pig alveolar macrophages studied by nanosecond fluorescence decay of 1,6-diphenyl-1,3,5-hexatriene: the effect of stimulation by concanavalin A and formyl peptides.

A. Holian, J. Vanderkooi, R. Restifo, 1982, Archives of biochemistry and biophysics.

Proximity relationships within the Fc segment of rabbit immunoglobulin G analyzed by resonance energy transfer.

J. Vanderkooi, C. Owen, F. Karush, 1981, Biochemistry.

Temperature excursion infrared (TEIR) spectroscopy used to study hydrogen bonding between water and biomolecules.

J. Vanderkooi, B. Zelent, J. L. Dashnau, 2005, Biochimica et biophysica acta.

Cytochrome c, A Membrane-Bound Enzyme

J. Vanderkooi, M. Erecínska, 1976 .

The Effects of Protein Environment on the Low Temperature Electronic Spectroscopy of Cytochrome c and Microperoxidase-11

K. Sharp, J. Vanderkooi, E. Manas, 1999 .

Structure of zinc-substituted cytochrome c: nuclear magnetic resonance and optical spectroscopic studies.

L. Mayne, J. Vanderkooi, H. Anni, 1995, Biochemistry.

Probing structure and motion of the mitochondrial cytochromes

J. Vanderkooi, B. Dixit, B.P. SUDHA N. DIXIT, 1984 .

Infrared spectroscopy of the cyanide complex of iron (II) myoglobin and comparison with complexes of microperoxidase and hemoglobin.

B. Chance, T. Yonetani, A. Tsuneshige, 1996, Biochemistry.

Effects of Salts of the Hofmeister Series on the Hydrogen Bond Network of Water.

J. Vanderkooi, Nathaniel V Nucci, 2008, Journal of molecular liquids.

Can fluorescent probes tell us anything about membranes

G. Radda, J. Vanderkooi, 1972 .

Luminescence from the carbon monoxide derivative of Agaricus bispora tyrosinase.

J. Vanderkooi, W. Bonner, C. Kanagy, 1988, Archives of biochemistry and biophysics.

Horseradish peroxidase monitored by infrared spectroscopy: effect of temperature, substrate and calcium.

J. Vanderkooi, W. W. Wright, E. Manas, 1999, Biochimica et biophysica acta.

Fluorescence line narrowing applied to the study of proteins.

J. Vanderkooi, M. Laberge, A. Kaposi, 1998, Biochimica et biophysica acta.

X-ray structure of snow flea antifreeze protein determined by racemic crystallization of synthetic protein enantiomers.

Anthony A Kossiakoff, A. Kossiakoff, V. Tereshko, 2008, Journal of the American Chemical Society.

Sampling field heterogeneity at the heme of c-type cytochromes by spectral hole burning spectroscopy and electrostatic calculations.

J. Vanderkooi, J. Friedrich, M. Laberge, 1999, Biophysical journal.

Probing the Active Site of Trypsin with Rose Bengal: Insights into the Photodynamic Inactivation of the Enzyme¶

Mazdak Khajehpour, T. Troxler, J. Vanderkooi, 2004 .

The hydration of amides in helices; a comprehensive picture from molecular dynamics, IR, and NMR

V. Daggett, W. DeGrado, R. P. Cheng, 2003, Protein science : a publication of the Protein Society.

Infrared Spectra of Amide Groups in α-Helical Proteins: Evidence for Hydrogen Bonding between Helices and Water

Jane M. Vanderkooi, Eric S. Manas, Wayne W. Wright, 2000 .

Fluorescent probe analysis of the lipid architecture of natural and experimental cholesterol-rich membranes.

B. Chance, J. Vanderkooi, S. Fischkoff, 1974, Biochemistry.

The photoexcited triplet state as a probe of chromophore-protein interaction in myoglobin.

J. Vanderkooi, P. Angiolillo, 1998, Biophysical journal.

Hydrogen Atoms Are Produced When Tryptophan within a Protein Is Irradiated with Ultraviolet Light

J. Vanderkooi, P. Angiolillo, 1996, Photochemistry and photobiology.

Sarcoplasmic reticulum. 8. Use of 8-anilino-1-naphthalene sulfonate as conformational probe on biological membranes.

J. Vanderkooi, A. Martonosi, 1969, Archives of biochemistry and biophysics.

Sarcoplasmic reticulum. XVI. The permeability of phosphatidyl choline vesicles for calcium.

J. Vanderkooi, A. Martonosi, 1971, Archives of biochemistry and biophysics.

Protein fluorescence quenching by small molecules: Protein penetration versus solvent exposure

S. Englander, J. Vanderkooi, G. Holtom, 1986, Proteins.

The anaerobic photolysis of lens alpha-crystallin: evidence for triplet state mediated photodamage.

J. Berger, J. Vanderkooi, 1990, Photochemistry and Photobiology.

THE ANAEROBIC PHOTOLYSIS OF LENS α‐CRYSTALLIN: EVIDENCE FOR TRIPLET STATE MEDIATED PHOTODAMAGE

J. Berger, J. Vanderkooi, 1990 .

Phosphorescence measurements of calf γ-II, III, and IV crystallins at 77 and 293 K

J. Berger, J. Vanderkooi, R. Borkman, 1989 .

Analysis of porphyrins and enzymes in porphyrin synthesis in Taenia solium cysticercus from man and pig.

F. Goodsaid, J. Vanderkooi, S. Sassa, 1987, Molecular and biochemical parasitology.

Differential scanning calorimetry and fluorescence study of lactoperoxidase as a function of guanidinium-HCl, urea, and pH.

K. Sharp, J. Vanderkooi, B. Zelent, 2010, Biochimica et biophysica acta.

Proteins and glasses: A comparative study of spectral diffusion phenomena

J. Vanderkooi, J. Friedrich, J. Fidy, 1991 .

Protonation of excited state pyrene-1-carboxylate by phosphate and organic acids in aqueous solution studied by fluorescence spectroscopy.

R. Coleman, J. Vanderkooi, I. Gryczynski, 2006, Biophysical journal.

Reactions of excited-state cytochrome c derivatives. delayed fluorescence and phosphorescence of zinc, tin, and metal-free cytochrome C at room temperature

V. Moy, J. Vanderkooi, B. Dixit, 1984 .

Use of the fluorescent dye, Pyrene, to study the dynamic aspects of membrane structure

J. Callis, B. Chance, J. Vanderkooi, 1974, The Histochemical Journal.

Pyrene. A probe of lateral diffusion in the hydrophobic region of membranes.

J. Callis, J. Vanderkooi, 1974, Biochemistry.

Resonance Raman investigation of nickel microperoxidase-11.

J. Vanderkooi, J. Shelnutt, S. Jia, 1999, Biochemistry.

Mutagenesis of key residues identifies the connection subdomain of HIV-1 reverse transcriptase as the site of inhibition by heme.

E. Argyris, J. Vanderkooi, Y. Paterson, 2001, European journal of biochemistry.

Effect of ethanol on membranes: a fluorescent probe study.

J. Vanderkooi, 1979, Alcoholism, clinical and experimental research.

Sarcoplasmic reticulum: XIII. Changes in the fluorescence of 8-anilino-1-naphthalene sulfonate during Ca2 transport☆

J. Vanderkooi, A. Martonosi, 1971 .

The Connection Domain Is Implicated in Metalloporphyrin Binding and Inhibition of HIV Reverse Transcriptase*

E. Argyris, B. Kay, J. Vanderkooi, 1999, The Journal of Biological Chemistry.

Protein in sugar films and in glycerol/water as examined by infrared spectroscopy and by the fluorescence and phosphorescence of tryptophan.

J. Vanderkooi, W. W. Wright, G. Guffanti, 2003, Biophysical journal.

The oxygen dependence of mitochondrial oxidative phosphorylation measured by a new optical method for measuring oxygen concentration.

W. Rumsey, J. Vanderkooi, D. Wilson, 1988, The Journal of biological chemistry.

Liquid and ice water and glycerol/water glasses compared by infrared spectroscopy from 295 to 12 K

J. Vanderkooi, B. Zelent, Nathaniel V Nucci, 2004 .

Glucokinase Activators for Diabetes Therapy

Changhong Li, Bogumil Zelent, Jane M. Vanderkooi, 2011, Diabetes Care.

Research and development of glucokinase activators for diabetes therapy: theoretical and practical aspects.

K. Kaestner, J. Vanderkooi, S. Berthel, 2011, Handbook of experimental pharmacology.

Sugar binding to recombinant wild-type and mutant glucokinase monitored by kinetic measurement and tryptophan fluorescence.

J. Vanderkooi, M. Magnuson, C. Buettger, 2008, The Biochemical journal.

Effects of growth temperature and supplementation with exogenous fatty acids on some physical properties of Clostridium butyricum phospholipids.

J. Vanderkooi, H. Goldfine, A. Horwitz, 1977, Biochimica et biophysica acta.

Phosphorescence of alkaline phosphatase of E. coli in vitro and in situ.

J. Vanderkooi, T. Horie, 1981, Biochimica et biophysica acta.

[Aladan3]TIPP: A fluorescent δ‐opioid antagonist with high δ‐receptor binding affinity and δ selectivity

J. Vanderkooi, I. Gryczynski, P. Schiller, 2005, Biopolymers.

Interaction of general anesthetics with phospholipid vesicles and biological membranes.

J. Vanderkooi, R. Landesberg, H. Selick, 1977, Biochimica et biophysica acta.

Oxygen in mammalian tissue: methods of measurement and affinities of various reactions.

I. Silver, J. Vanderkooi, M. Erecínska, 1991, The American journal of physiology.

Fluorescence line narrowing spectroscopy: a tool for studying proteins.

J. Vanderkooi, P. Angiolillo, M. Laberge, 1997, Methods in enzymology.

Stability diagram and unfolding of a modified cytochrome c: what happens in the transformation regime?

J. Vanderkooi, J. Friedrich, H. Lesch, 2002, Biophysical journal.

The lipid integrity of membranes of guinea pig alveolar macrophages studied by nanosecond fluorescence decay of 1,6-diphenyl-1,3,5-hexatriene: the influence of temperature and benzyl alcohol.

A. Holian, J. Vanderkooi, S. Cherenkevich, 1982, Archives of biochemistry and biophysics.

Sarcoplasmic reticulum. XII. The interaction of 8-anilino-1-naphthalene sulfonate with skeletal muscle microsomes.

J. Vanderkooi, A. Martonosi, 1971, Archives of biochemistry and biophysics.

Influence of surface groups of proteins on water studied by freezing/thawing hysteresis and infrared spectroscopy.

K. Sharp, J. Vanderkooi, B. Zelent, 2009, Biophysical chemistry.

Water in the half shell: structure of water, focusing on angular structure and solvation.

K. Sharp, J. Vanderkooi, 2010, Accounts of chemical research.

Interaction between cytochrome c and cytochrome c peroxidase: excited-state reactions of zinc- and tin-substituted derivatives.

T. Yonetani, J. Vanderkooi, T. Horie, 1987, Biochemistry.

Fluorescence line‐narrowing spectra of Zn‐cytochrome c. Temperature dependence

J. Vanderkooi, H. Kołoczek, J. Fidy, 1987 .

Tryptophan and Proteins Can Be Entrapped in UV Transmitting Glass

J. Vanderkooi, Camille A. Stewart, 1999, Journal of Fluorescence.

Hole burning experiments with proteins: Relaxations, fluctuations and glass-like features

J. Vanderkooi, J. Friedrich, V. V. Ponkratov, 2006 .

RESOLVED FLUORESCENCE EMISSION SPECTRA OF IRON‐FREE CYTOCHROME c

J. Vanderkooi, J. Leigh, Paul J. Angiolillo, 1982, Photochemistry and photobiology.

Computational approaches to investigate how biological macromolecules can be protected in extreme conditions.

J. Vanderkooi, J. L. Dashnau, 2007, Journal of food science.

A carboxy-terminal alpha-helical segment in the rat skeletal muscle voltage-dependent Na+ channel is responsible for its interaction with the amino-terminus.

J. Vanderkooi, R. Kallen, S. Cohen, 2000, Biochimica et biophysica acta.

Microperoxidase-11: molecular dynamics and Q-band excited resonance Raman of the oxidized, reduced and carbonyl forms.

J. Vanderkooi, M. Laberge, A. Vreugdenhil, 1998, Journal of biomolecular structure & dynamics.

Interaction of polyamines with the Ca(2+)-binding protein parvalbumin.

J. Vanderkooi, K. Sudhakar, M. Erecínska, 1995, European journal of biochemistry.

Carbonmonoxy horseradish peroxidase as a function of pH and substrate: influence of local electric fields on the optical and infrared spectra.

J. Vanderkooi, W. W. Wright, I. Rasnik, 2001, Biochemistry.

Penetration of analogues of H2O and CO2 in proteins studied by room temperature phosphorescence of tryptophan.

J. Vanderkooi, W. W. Wright, C. Owen, 1992, Biochemistry.

Quenching of room temperature protein phosphorescence by added small molecules.

S. Englander, J. Vanderkooi, D. B. Calhoun, 1988, Biochemistry.

Accessibility of oxygen with respect to the heme pocket in horseradish peroxidase

K. Sharp, S. Vinogradov, Mazdak Khajehpour, 2003, Proteins.

Cytochrome c interaction with yeast cytochrome b2. Heme distances determined by energy transfer in fluorescence resonance.

J. Vanderkooi, J. Casadei, G. Woodrow, 1980, European journal of biochemistry.

TRYPTOPHAN PHOSPHORESCENCE AT ROOM TEMPERATURE AS A TOOL TO STUDY PROTEIN STRUCTURE AND DYNAMICS

J. Vanderkooi, S. Papp, 1989, Photochemistry and photobiology.

On the prevalence of room-temperature protein phosphorescence.

S. Englander, J. Vanderkooi, D. B. Calhoun, 1987, Science.

Penetration of small molecules into proteins studied by quenching of phosphorescence and fluorescence.

S. Englander, J. Vanderkooi, D. B. Calhoun, 1983, Biochemistry.

The protein state of matter.

J. Vanderkooi, 1998, Biochimica et biophysica acta.

Domain structural flexibility in rhodanese examined by quenching of a phosphorescent probe.

J. Vanderkooi, H. Kołoczek, 1987, Biochimica et biophysica acta.

Penetration of dioxygen into proteins studied by quenching of phosphorescence and fluorescence.

S. Englander, J. Vanderkooi, D. B. Calhoun, 1983, Biochemistry.

Tryptophan Phosphorescence from Proteins at Room Temperature

J. Vanderkooi, 2002 .

Electron transfer from excited tryptophan to cytochrome c: mechanism of phosphorescence quenching?

J. Vanderkooi, W. W. Wright, V. Dadák, 1992, Biochimica et biophysica acta.

EPR Spectroscopy and Photophysics of the Lowest Photoactivated Triplet State of a Series of Highly Conjugated (Porphinato)Zn Arrays

V. S. Lin, J. Vanderkooi, M. Therien, 1995 .

Intrinsic tryptophan phosphorescence as a marker of conformation and oxygen diffusion in purified cytochrome oxidase

J. Vanderkooi, S. Papp, T. King, 1991, FEBS letters.

Temperature dependence of hydrogen bonding and freezing behavior of water in reverse micelles.

J. Vanderkooi, Nathaniel V Nucci, 2005, The journal of physical chemistry. B.

Oxygen diffusion in phospholipid artificial membranes studied by Fourier transform nuclear magnetic resonance.

J. Vanderkooi, J. Oberholtzer, G. Mcdonald, 1979, Archives of biochemistry and biophysics.

Spectral splitting in the alpha (Q0,0) absorption band of ferrous cytochrome c and other heme proteins.

J. Vanderkooi, W. W. Wright, P. Angiolillo, 1996, Biochemistry.

Ultrafast vibrational spectroscopy of a degenerate mode of guanidinium chloride.

R. Hochstrasser, J. Vanderkooi, D. Kuroda, 2009, The journal of physical chemistry. B.

Temperature Dependence for Fluorescence of β-NADH in Glycerol/Water Solution and in Trehalose/Sucrose Glass

T. Troxler, J. Vanderkooi, B. Zelent, 2006, Journal of Fluorescence.

Spectral Analysis of Cytochrome c: Effect of Heme Conformation, Axial Ligand, Peripheral Substituents, and Local Electric Fields

K. Sharp, J. Vanderkooi, I. Rasnik, 2001 .

Infrared spectroscopy used to evaluate glycosylation of proteins.

Mazdak Khajehpour, J. Vanderkooi, Mazdak Khajehpour, 2006, Analytical biochemistry.

Electric field and conformational effects of cytochrome c and solvent on cytochrome c peroxidase studied by high-resolution fluorescence spectroscopy.

K. Sharp, T. Yonetani, J. Vanderkooi, 1994, Biochemistry.

The pH dependence of phototautomerism in horse radish peroxidase monitored by fluorescence site-selection spectroscopy

J. Vanderkooi, K. Paul, H. Kołoczek, 1987 .

Fluorescence Site Selection Spectroscopy on Heme Proteins

J. Vanderkooi, J. Fidy, 1991 .

Nitric oxide diffusion coefficients in solutions, proteins and membranes determined by phosphorescence.

J. Vanderkooi, W. W. Wright, M. Erecínska, 1994, Biochimica et biophysica acta.

Phenylalanine fluorescence and phosphorescence used as a probe of conformation for cod parvalbumin

J. Vanderkooi, W. W. Wright, C. M. Phillips, 1993, Journal of Fluorescence.

A Density Functional Theory Study of Conformers in the Ferrous CO Complex of Horseradish Peroxidase with Distinct Fe−C−O Configurations

K. Sharp, J. Vanderkooi, N. Prabhu, 2003 .

Conformational effects of calcium release from parvalbumin: comparison of computational simulations with spectroscopic investigations.

J. Vanderkooi, P. Liebman, W. W. Wright, 1997, Biochemistry.

Dynamics of parvalbumin studied by fluorescence emission and triplet absorption spectroscopy of tryptophan.

J. Vanderkooi, C. Owen, C. M. Phillips, 1995, Biochemistry.

Oxygen distribution in isolated perfused liver observed by phosphorescence imaging.

W. Rumsey, J. Vanderkooi, D. Wilson, 1989, Advances in experimental medicine and biology.

Surface of cytochrome c: infrared spectroscopy of carboxyl groups.

J. Vanderkooi, W. W. Wright, M. Laberge, 1997, Biochemistry.

Consequences of Inhomogeneous Broadening on Fluorescence Line Narrowing Spectra

J. Vanderkooi, W. W. Wright, A. Kaposi, 2004, Journal of Fluorescence.

The Influence of Protein Environment on the Low Temperature Electronic Spectroscopy of Zn-Substituted Cytochrome c

K. Sharp, J. Vanderkooi, J. Friedrich, 2000 .

Native and denatured Zn cytochrome c studied by fluorescence line narrowing spectroscopy.

J. Vanderkooi, V. Logovinsky, A. Kaposi, 1993, Biochimica et biophysica acta.

Vibronic energy map and excited state vibrational characteristics of magnesium myoglobin determined by energy-selective fluorescence.

J. Vanderkooi, A. Kaposi, 1992, Proceedings of the National Academy of Sciences of the United States of America.

Fluorescence line narrowed spectra of Zn and metal-free cytochrome c

J. Vanderkooi, V. Logovinsky, A. Kaposi, 1991, Journal of Fluorescence.

Molecular probes: what is the range of their interaction with the environment?

J. Vanderkooi, J. Friedrich, H. Lesch, 2004, Biophysical journal.

Effects of NO‐Generating Compounds on Synaptosomal Energy Metabolism

J. Vanderkooi, D. Nelson, M. Erecínska, 1995, Journal of neurochemistry.

Optical spectra of lactoperoxidase as a function of solvent.

J. Vanderkooi, J. Paul, P. Ohlsson, 2005, Biochemistry.

Tryptophan in horseradish peroxidase.

J. Vanderkooi, P. Ohlsson, K. Paul, 1986, Acta chemica Scandinavica. Series B: Organic chemistry and biochemistry.

Vibrational Stark Effects on Carbonyl, Nitrile, and Nitrosyl Compounds Including Heme Ligands, CO, CN, and NO, Studied with Density Functional Theory.

K. Sharp, J. Vanderkooi, S. Dalosto, 2004, The journal of physical chemistry. B.

Tryptophan interactions with glycerol/water and trehalose/sucrose cryosolvents: infrared and fluorescence spectroscopy and ab initio calculations.

J. Vanderkooi, B. Zelent, J. L. Dashnau, 2005, Biophysical chemistry.

Ultrafast spectroscopy of guanidinium chloride

R. Hochstrasser, J. Vanderkooi, D. Kuroda, 2009 .

Changes in water structure induced by the guanidinium cation and implications for protein denaturation.

J. Vanderkooi, J. N. Scott, Nathaniel V Nucci, 2008, The journal of physical chemistry. A.

Effect of charge interactions on the carboxylate vibrational stretching frequency in c-type cytochromes investigated by continuum electrostatic calculations and FTIR spectroscopy.

K. Sharp, J. Vanderkooi, M. Laberge, 1998, Biophysical chemistry.

Reactions of excited triplet states of metal-substituted myoglobins

Jane M. Vanderkooi, Charles M. Phillips, Sandor Papp, 1990, Photonics West - Lasers and Applications in Science and Engineering.

Anthracycline binding to synthetic and natural membranes. A study using resonance energy transfer.

J. Vanderkooi, G. Maniara, E. Griffin, 1986, Biochemistry.

Phosphorescence of individual horseradish peroxidases proteins having a modified heme group

Erwen Mei, R. Hochstrasser, S. Vinogradov, 2005 .

Infrared spectroscopy used to study ice formation: the effect of trehalose, maltose, and glucose on melting.

J. Vanderkooi, B. Zelent, 2009, Analytical biochemistry.

Water structure changes induced by hydrophobic and polar solutes revealed by simulations and infrared spectroscopy

K. Sharp, B. Madan, J. Vanderkooi, 2001 .

Phosphorimeters for analysis of decay profiles and real time monitoring of exponential decay and oxygen concentrations.

J. Vanderkooi, D. Wilson, T. J. Green, 1988, Analytical Biochemistry.

A versatile and sensitive method for measuring oxygen.

D. Bloomgarden, J. Vanderkooi, D. Wilson, 1987, Advances in experimental medicine and biology.

Spectroscopic characterization of bendazac and benzydamine: possible photochemical modes of action.

A. Laties, J. Vanderkooi, J. Jez, 1996, Biochemical and biophysical research communications.

Quenching mechanisms of room-temperature phosphorescence of tryptophan in proteins

Jane M. Vanderkooi, Charles S. Owen, Wayne W. Wright, 1992, Photonics West - Lasers and Applications in Science and Engineering.

Correlation Between Protein Structure and Room Temperature Phosphorescence of Tryptophans

J. Berger, J. Vanderkooi, W. W. Wright, 1991 .

A new method for measuring oxygen concentration in biological systems.

J. Vanderkooi, D. Wilson, D F Wilson, 1986, Advances in experimental medicine and biology.

Protonation of porphyrin in iron-free cytochrome c: spectral properties of monocation free base porphyrin, a charge analogue of ferric heme.

J. Vanderkooi, W. W. Wright, S. Zentko, 1999, Biospectroscopy.

Brownian dynamics simulations of intramolecular energy transfer.

J. Berger, J. Vanderkooi, 1988, Biophysical chemistry.

Cellular effects of endotoxin in vitro: mobility of endotoxin in the plasma membrane of hepatocytes and neuroblastoma cells.

J. Vanderkooi, G. Maniara, L. Kilpatrick-Smith, 1985, Biochimica et biophysica acta.

Orientation distributions for cytochrome c on polar and nonpolar interfaces by total internal reflection fluorescence.

J. Vanderkooi, W. W. Wright, A. Tronin, 2002, Biophysical journal.