K. Ramanathan

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Significance of CH/π Interactions on the Stability of Therapeutic Proteins

K. Ramanathan, V. Shanthi, R. Sethumadhavan, 2009 .

Contribution of cation-π interaction and its effect on the structural stability of laccase enzymes - a computational study.

K. Ramanathan, V. Shanthi, R. Sethumadhavan, 2010 .

Role of the Cation-π Interaction in Therapeutic Proteins: A Comparative Study with Conventional Stabilizing Forces

Shanthi, K. Ramanathan, R. Sethumadhavan, 2009 .

Virtual screening for oseltamivir-resistant a (H5N1) influenza neuraminidase from traditional Chinese medicine database: a combined molecular docking with molecular dynamics approach

K. Ramanathan, V. Karthick, 2013, SpringerPlus.

Drug Design for ALK-Positive NSCLC: an Integrated Pharmacophore-Based 3D QSAR and Virtual Screening Strategy

K. Ramanathan, V. Shanthi, Nivya James, 2018, Applied Biochemistry and Biotechnology.

Density Functional Theory and Molecular Simulation Studies for Prioritizing Anaplastic Lymphoma Kinase Inhibitors

K. Ramanathan, V. Shanthi, Nivya James, 2019, Applied Biochemistry and Biotechnology.

Studies on flexibility and binding affinity of Asp25 of HIV-1 protease mutants.

Rituraj Purohit, C. Sudandiradoss, K. Ramanathan, 2008, International journal of biological macromolecules.

A novel computational and structural analysis of nsSNPs in CFTR gene

R. Purohit, C. Sudandiradoss, R. Rajasekaran, 2008, Genomic Medicine.

Design of ALK Inhibitors for Non-Small Cell Lung Cancer – A Fragment Based Approach

K. Ramanathan, V. Shanthi, Nivya James, 2019 .

Investigation of Nalidixic Acid Resistance Mechanism in Salmonella enterica Using Molecular Simulation Techniques

K. Ramanathan, V. Shanthi, B. Preethi, 2015, Applied Biochemistry and Biotechnology.

Molecular level understanding of resistance to nalidixic acid in Salmonella enteric serovar typhimurium associates with the S83F sequence type

K. Ramanathan, B. Preethi, 2015, European Biophysics Journal.

Exploring the Lead Compounds for Zika Virus NS2B-NS3 Protein: an e-Pharmacophore-Based Approach

K. Ramanathan, V. Shanthi, B. Preethi, 2018, Applied Biochemistry and Biotechnology.

IDENTIFICATION OF STABLE ANTI-Viral PEPTIDES FOR THERAPEUTIC APPLICATIONS - A COMPUTATIONAL APPROACH

S. Mohapatra, K. Ramanathan, V. Shanthi, 2012 .

Computational investigation of oseltamivir resistance in influenza A (H5N1) virus

K. Ramanathan, V. Karthick, 2013, Medicinal Chemistry Research.

Identification of Potential Inhibitors of H5N1 Influenza A Virus Neuraminidase by Ligand-Based Virtual Screening Approach

R. Rajasekaran, K. Ramanathan, V. Shanthi, 2013, Cell Biochemistry and Biophysics.

Discovery of Therapeutic Lead Molecule Against β-Tubulin Using Computational Approach

K. Ramanathan, V. Shanthi, Kanika Verma, 2018, Interdisciplinary Sciences: Computational Life Sciences.

Current progress and future perspectives of polypharmacology : From the view of non-small cell lung cancer.

D. Kihara, Woong-Hee Shin, K. Ramanathan, 2019, Seminars in cancer biology.

Identification of Potential Therapeutics to Conquer Drug Resistance in Salmonella typhimurium: Drug Repurposing Strategy

K. Ramanathan, B. Preethi, V. Shanthi, 2016, BioDrugs.

Computational analysis of cdh1 missense mutations in the cause of hereditary diffuse gastric cancer

R. Rajasekaran, K. Ramanathan, V. Shanthi, 2013 .

A compact review on the comparison of conventional and non-conventional interactions on the structural stability of therapeutic proteins

K. Ramanathan, V. Shanthi, R. Sethumadhavan, 2011, Interdisciplinary Sciences: Computational Life Sciences.

Predicting Therapeutic Template by Evaluating the Structural Stability of Anti-Cancer Peptides—A Computational Approach

C. Sudandiradoss, R. Rajasekaran, K. Ramanathan, 2011, International Journal of Peptide Research and Therapeutics.

Exploring the structural and functional impact of the ALK F1174L mutation using bioinformatics approach

Anish Kumar, Anish Kumar, K. Ramanathan, 2014, Journal of Molecular Modeling.

Effect of deleterious nsSNP on the HER2 receptor based on stability and binding affinity with herceptin: a computational approach.

R. Purohit, C. George Priya Doss, C. Sudandiradoss, 2008, Comptes rendus biologies.

Computational Investigation of Drug-Resistant Mutant of M2 Proton Channel (S31N) Against Rimantadine

K. Ramanathan, V. Karthick, 2014, Cell Biochemistry and Biophysics.

Insight into the Oseltamivir Resistance R292K Mutation in H5N1 Influenza Virus: A Molecular Docking and Molecular Dynamics Approach

K. Ramanathan, V. Karthick, 2013, Cell Biochemistry and Biophysics.

In silico analysis of structural and functional consequences in p16INK4A by deleterious nsSNPs associated CDKN2A gene in malignant melanoma.

C. Sudandiradoss, R. Rajasekaran, K. Ramanathan, 2008, Biochimie.

Computational and structural investigation of deleterious functional SNPs in breast cancer BRCA2 gene.

C. Sudandiradoss, R. Rajasekaran, K. Ramanathan, 2008, Sheng wu gong cheng xue bao = Chinese journal of biotechnology.

Computational Identification of Significant Missense Mutations in AKT1 Gene

R. Rajasekaran, K. Ramanathan, V. Shanthi, 2014, Cell Biochemistry and Biophysics.

Identifying therapeutic template by evaluating the structural stability of gram positive anti-bacterial peptides-a computational approach

K. Ramanathan, R. Sethumadhavan, 2011, Interdisciplinary Sciences: Computational Life Sciences.

Exploring the Role of C-H-II Interactions on the Structural Stability of Membrane Proteins

K. Ramanathan, V. Shanthi, R. Sethumadhavan, 2010 .

Ligand-Based Pharmacophore Screening Strategy: a Pragmatic Approach for Targeting HER Proteins

K. Ramanathan, Nivya James, 2018, Applied Biochemistry and Biotechnology.

Computational studies reveal potential dolichyl-phosphate N-acetylglucosaminephosphotransferase inhibitors amidst existing drugs

K. Ramanathan, A. Ibezim, P. Uzor, 2022, Journal of biomolecular structure & dynamics.

Identification of potential inhibitor targeting enoyl-acyl carrier protein reductase (InhA) in Mycobacterium tuberculosis: a computational approach

K. Ramanathan, V. Shanthi, 2013, 3 Biotech.

COMPUTATIONAL INVESTIGATION OF NH...Π INTERACTIONS IN THE STRUCTURAL STABILITY OF TRANSMEMBRANE PROTEINS

Shashank Srivastava, S. Mohapatra, K. Ramanathan, 2011 .

Molecular Dynamics Simulation Approach to Understand Lamivudine Resistance in Hepatitis B Virus Polymerase

K. Ramanathan, M. Srividhya, 2015, Pharmaceutical Chemistry Journal.

Computational analysis of deleterious missense mutations in aspartoacylase that cause Canavan’s disease

R. Rajasekaran, K. Ramanathan, V. Shanthi, 2012, Science China Life Sciences.

Discovery of a potential lead compound for treating leprosy with dapsone resistance mutation in M. leprae folP1.

K. Ramanathan, D. Dhanasekaran, F. Nawaz Khan, 2016, Molecular bioSystems.

Analysisofbindingresiduesbetweenscorpionneurotoxinsand D2dopaminereceptor:Acomputationaldockingstudy

R. Purohit, C. Sudandiradoss, R. Rajasekaran, 2008 .

E-pharmacophore hypothesis strategy to discover potent inhibitor for influenza treatment

K. Ramanathan, V. Shanthi, K. Rohini, 2019, Journal of Theoretical and Computational Chemistry.

Contribution of unconventional C-H…O bonds to the structural stability of Antimicrobial peptides

K. Ramanathan, V. Shanthi, R. Sethumadhavan, 2009, Interdisciplinary Sciences: Computational Life Sciences.

DEVELOPMENT OF CANCER DATABASE BY AMALGAMATION OF VARIOUS EXISTING DATABASE

Sorabh Singhal, R. Rajasekaran, K. Ramanathan, 2012 .

Computational Analysis of Single Nucleotide Polymorphisms in Regulator of G Protein Signaling 4 (RGS4) Gene

K. Ramanathan, R. Dash, 2013 .

EXPLORING THE ROLE OF C–H … π INTERACTIONS ON THE STRUCTURAL STABILITY OF ANTIMICROBIAL PEPTIDES

K. Ramanathan, R. Sethumadhavan, 2009 .

Identification of Active Sites and Calculation of Structural Parameters for the Her2 Target Receptor

K. Ramanathan, 2017 .

Identification of Novel Hepatitis C Virus NS3-4A Protease Inhibitors byVirtual Screening Approach

Shanthi, Anish Kumar, K. Ramanathan, 2014 .

Discovery of novel anaplastic lymphoma kinase inhibitors: Structure and energy-based pharmacophore strategy

K. Ramanathan, V. Shanthi, Nivya James, 2019, Journal of Theoretical and Computational Chemistry.

Extraction of Bioactive Compounds from Millingtonia hortensis for theTreatment of Dapsone Resistance in Leprosy

Shanthi, Anish Kumar, K. Ramanathan, 2014 .

EXPLORATION OF PLANT BIOACTIVE FROM CASSIA FISTULA LEAVES FOR THE TREATMENT OF OVARIAN CANCER: AN INTEGRATIVE APPROACH

Shanthi, K. Ramanathan, Kanika Verma, 2016 .

Computational investigation of oseltamivir resistance in influenza A (H5N1) virus

K. Ramanathan, V. Karthick, 2013, Medicinal Chemistry Research.

Identification of Potential Inhibitors of H5N1 Influenza A Virus Neuraminidase by Ligand-Based Virtual Screening Approach

R. Rajasekaran, K. Ramanathan, V. Shanthi, 2013, Cell Biochemistry and Biophysics.

Tackling Lung Cancer Drug Resistance Using Integrated Drug-Repurposing Strategy

K. Ramanathan, V. Shanthi, Nivya James, 2019, In Silico Drug Design.

Design, Synthesis, and Biological Evaluation of Tryptanthrin Alkaloids as Potential anti-Diabetic and Anticancer Agents

K. Ramanathan, K. Gomathi, Chitrala Teja, 2022, Polycyclic Aromatic Compounds.

In-silico molecular modelling, MM/GBSA binding free energy and molecular dynamics simulation study of novel pyrido fused imidazo[4,5-c]quinolines as potential anti-tumor agents

Arnold Emerson Isaac, K. Ramanathan, K. Chanda, 2022, Frontiers in Chemistry.

New sulphonamide-peptide hybrid molecules as potential PBP 2a ligands and methicillin resistant Staphylococcus aureus actives

K. Ramanathan, A. Ibezim, I. Ezeonu, 2022, Journal of biomolecular structure & dynamics.

Inhibition of multiple SARS-CoV-2 proteins by an antiviral biomolecule, seselin from Aegle marmelos deciphered using molecular docking analysis

K. Ramanathan, S. Janarthanan, S. Bhuvaragavan, 2020 .

In silico analysis of detrimental mutations in ADD domain of chromatin remodeling protein ATRX that cause ATR-X syndrome: X-linked disorder

R. Rajasekaran, K. Ramanathan, V. Shanthi, 2013, Network Modeling Analysis in Health Informatics and Bioinformatics.

Spectroscopic Identification and Molecular Modeling of Diethyl 7-hydroxytrideca-2, 5, 8, 11-tetraenedioate: a Herbicidal Compound from Streptomyces sp.

K. Ramanathan, V. Shanthi, S. Chandraleka, 2017, Arabian Journal for Science and Engineering.

Spectroscopic Identification and Molecular Modeling of Diethyl 7-hydroxytrideca-2, 5, 8, 11-tetraenedioate: a Herbicidal Compound from Streptomyces sp.

K. Ramanathan, V. Shanthi, D. Dhanasekaran, 2017 .

Identification and structural comparison of deleterious mutations in nsSNPs of ABL1 gene in chronic myeloid leukemia: A bio-informatics study

Rituraj Purohit, C. Sudandiradoss, Rao Sethumadhavan, 2008, J. Biomed. Informatics.

Structural and Functional Impact of Genetic Variations in FOXC2: A Computational Study

Shanthi, R. Rajasekaran, K. Ramanathan, 2014 .

Discovery of Potent ALK Inhibitors Using Pharmacophore-Informatics Strategy

Nivya James, K. Ramanathan, K. Ramanathan, 2018, Cell Biochemistry and Biophysics.

In Silico identification of catalytic residues in azobenzene reductase from bacillus subtilis and its docking studies with azo dyes

K. Ramanathan, V. Shanthi, R. Sethumadhavan, 2009, Interdisciplinary Sciences: Computational Life Sciences.

Investigation of Paclitaxel Resistant R306C Mutation in β‐Tubulin—A Computational Approach

K. Ramanathan, Kanika Verma, 2015, Journal of cellular biochemistry.

Multi-Dimensional Screening Strategy for Drug Repurposing with Statistical Framework—A New Road to Influenza Drug discovery

K. Rohini, K. Ramanathan, V. Shanthi, 2019, Cell Biochemistry and Biophysics.

Discovery of potential ALK inhibitors by virtual screening approach

V Shanthi, Anish Kumar, Anish Kumar, 2016, 3 Biotech.

Computational Investigation and Experimental Validation of Crizotinib Resistance Conferred by C1156Y Mutant Anaplastic Lymphoma Kinase

V Shanthi, Anish Kumar, Anish Kumar, 2015, Molecular informatics.

Reckoning the SIX1 mutation’s effects in branchio-oto-renal syndrome — A bioinformatics approach

K. Ramanathan, V. Shanthi, B. Preethi, 2015, Frontiers in Biology.

Investigations on the interactions of scorpion neurotoxins with the predicted structure of D1 dopamine receptor by protein-protein docking method. A bioinformatics approach.

R. Purohit, C. Sudandiradoss, R. Rajasekaran, 2008, Comptes rendus biologies.

In silico analysis of drug-resistant mutant of neuraminidase (N294S) against oseltamivir

R. Rajasekaran, K. Ramanathan, V. Shanthi, 2013, Protoplasma.

Exploring the Cause of Oseltamivir Resistance Against Mutant H274Y Neuraminidase by Molecular Simulation Approach

V. Shanthi, K. Ramanathan, V. Karthick, 2012, Applied Biochemistry and Biotechnology.

Management of crizotinib resistance in lung cancer using traditional plant source: An in silico strategies.

V. Shanthi, K. Ramanathan, Anish Kumar, 2016 .

Discovery of anaplastic lymphoma kinase inhibitors from natural product library: A holistic in silico approach

K. Ramanathan, V. Shanthi, Nivya James, 2020, Biotechnology and applied biochemistry.

In Silico Analysis of Detrimental Missense Mutations on SAP and Its Effect on Interactions with SLAM

R. Rajasekaran, K. Ramanathan, V. Shanthi, 2012 .

Computational analysis of deleterious missense mutations in aspartoacylase that cause Canavan’s disease

R. Rajasekaran, K. Ramanathan, V. Shanthi, 2012, Science China Life Sciences.

Probiotic Polysaccharides as Toll-Like Receptor 4 Modulators—An In Silico Strategy

K. Ramanathan, T. M. Kumar, 2021, Advances in Probiotics.

Insight into the Oseltamivir Resistance R292K Mutation in H5N1 Influenza Virus: A Molecular Docking and Molecular Dynamics Approach

K. Ramanathan, V. Karthick, bullet K Ramanathan, 2014, Cell Biochemistry and Biophysics.

Exploring the impact of F270V mutation in the β-tubulin (Bos Taurus) structure and its function: a computational perspective

K. Ramanathan, Kanika Verma, 2015, Biotechnology Letters.

Molecular level understanding of resistance to nalidixic acid in Salmonella enteric serovar typhimurium associates with the S83F sequence type

K. Ramanathan, B. Preethi, 2015, European Biophysics Journal.

Exploring natural compounds for the management of non-small cell lung cancer

Shanthi, K. Ramanathan, S. Saranyadevi, 2020 .

Computational analysis of amprenavir resistance triple mutant (V32I, I47V and V82I) in HIV-1 protease

K. Ramanathan, V. Shanthi, V. Karthick, 2014, Network Modeling Analysis in Health Informatics and Bioinformatics.

Discovery of Therapeutic Lead Molecule Against β-Tubulin Using Computational Approach

K. Ramanathan, V. Shanthi, Kanika Verma, 2018, Interdisciplinary Sciences: Computational Life Sciences.

Discovery of Potential, Non‐Toxic Influenza Virus Inhibitor by Computational Techniques

K. Ramanathan, V. Karthick, A. Toropova, 2014, Molecular informatics.

A computational approach to explore the functional missense mutations in the spindle check point protein Mad1

R. Rajasekaran, K. Ramanathan, V. Shanthi, 2013, Frontiers in Biology.

STRUCTURAL AND FUNCTIONAL IMPACT OF G2032R MUTATION IN ROS1 – A THEORETICAL PERSPECTIVE

Shanthi, K. Ramanathan, Anish Kumar, 2017 .

Discovery of Potent ALK Inhibitors Using Pharmacophore-Informatics Strategy

K. Ramanathan, Nivya James, 2017, Cell Biochemistry and Biophysics.

Discovery of potent Covid‐19 main protease inhibitors using integrated drug‐repurposing strategy

K. Ramanathan, V. Shanthi, Nivya James, 2021, Biotechnology and applied biochemistry.

Inhibition of multiple SARS-CoV-2 proteins by an antiviral biomolecule, seselin from Aegle marmelos deciphered using molecular docking analysis

K. Ramanathan, S. Janarthanan, S. Bhuvaragavan, 2021, Journal of biomolecular structure & dynamics.

Exploring the Role of C–H….π Interactions on the Structural Stability of Single Chain “All-Alpha” Proteins

K. Ramanathan, V. Shanthi, R. Sethumadhavan, 2010, Applied biochemistry and biotechnology.

Analysis of binding residues between scorpion neurotoxins and D2 dopamine receptor: A computational docking study

Rituraj Purohit, C. Sudandiradoss, Rao Sethumadhavan, 2008, Comput. Biol. Medicine.

Investigations on the interactions of scorpion neurotoxins with the predicted structure of D1 dopamine receptor by protein-protein docking method. A bioinformatics approach.

C. Sudandiradoss, R. Rajasekaran, K. Ramanathan, 2008, Comptes rendus. Biologies.