S. Kaeppler

发表

Breeding Maize for Lignocellulosic Biofuel Production

N. Leon, S. Kaeppler, J. Lauer, 2013 .

The Switchgrass Genome: Tools and Strategies

J. Schmutz, C. Buell, S. Kaeppler, 2011 .

Shovelomics: high throughput phenotyping of maize (Zea mays L.) root architecture in the field

J. Lynch, S. Kaeppler, S. Trachsel, 2011, Plant and Soil.

Assessing the Viability of Recovery of Hydroxycinnamic Acids from Lignocellulosic Biorefinery Alkaline Pretreatment Waste Streams

C. Maravelias, J. Sedbrook, J. Coon, 2020, ChemSusChem.

An Expanded Maize Gene Expression Atlas based on RNA Sequencing and its Use to Explore Root Development

R. Sekhon, C. Buell, N. Leon, 2016, The plant genome.

Generation of Transcript Assemblies and Identification of Single Nucleotide Polymorphisms from Seven Lowland and Upland Cultivars of Switchgrass

J. Schmutz, C. Buell, S. Kaeppler, 2014 .

Quantitative trait loci controlling leaf and tassel traits in a B73 × Mo17 population of maize

S. Kaeppler, S. Mickelson, C. Stuber, 2002 .

Insights into the Maize Pan-Genome and Pan-Transcriptome[W][OPEN]

M. A. Pedraza, R. Sekhon, F. Peñagaricano, 2014, Plant Cell.

TIPS: a system for automated image-based phenotyping of maize tassels

Joseph L. Gage, Nathan D. Miller, S. Kaeppler, 2017, Plant Methods.

Utility of RNA Sequencing for Analysis of Maize Reproductive Transcriptomes

R. Sekhon, C. Buell, N. Jiang, 2011 .

Genome-wide atlas of transcription during maize development.

R. Sekhon, C. Buell, N. Leon, 2011, The Plant journal : for cell and molecular biology.

Maize HapMap2 identifies extant variation from a genome in flux

Peter J. Bradbury, Robert J. Elshire, Katherine E. Guill, 2012, Nature Genetics.

Shared genetic architecture underlying root metaxylem phenotypes under drought stress in cereals

J. Lynch, S. Kaeppler, K. Brown, 2020, bioRxiv.

Hierarchical classification of switchgrass genotypes using SSR and chloroplast sequences: ecotypes, ploidies, gene pools, and cultivars

D. L. Price, S. Kaeppler, M. Casler, 2011, Theoretical and Applied Genetics.

Mapping of QTL controlling root hair length in maize (Zea mays L.) under phosphorus deficiency

J. Lynch, S. Kaeppler, Jinming Zhu, 2005, Plant and Soil.

Comparative population genomics of maize domestication and improvement

Xun Xu, Jeffrey Ross-Ibarra, Peter Tiffin, 2012, Nature Genetics.

Candidate Variants for Additive and Interactive Effects on Bioenergy Traits in Switchgrass (Panicum virgatum L.) Identified by Genome‐Wide Association Analyses

C. Buell, S. Kaeppler, M. Casler, 2018, The plant genome.

Accuracy of Genomic Prediction in Switchgrass (Panicum virgatum L.) Improved by Accounting for Linkage Disequilibrium

C. Robin Buell, Robert B. Mitchell, Shawn M. Kaeppler, 2016, G3: Genes, Genomes, Genetics.

DNA Content and Chloroplast DNA Polymorphisms among Switchgrasses from Remnant Midwestern Prairies

K. Vogel, S. Kaeppler, D. Lee, 1997 .

Conserved Transcriptional Regulatory Programs Underlying Rice and Barley Germination

S. Kaeppler, S. Tian, Zongrang Liu, 2014, PloS one.

Evolutionary Divergence of Monocot and Dicot Methyl-CpG-Binding Domain Proteins1[w]

Nathan M. Springer, N. Springer, S. Kaeppler, 2005, Plant Physiology.

Genome Analysis Evolutionary Divergence of Monocot and Dicot Methyl-CpG-Binding Domain Proteins 1 [ w ]

N. Springer, S. Kaeppler, 2005 .

Epigenetic aspects of somaclonal variation in plants

S. Kaeppler, H. Kaeppler, Y. Rhee, 2000, Plant Molecular Biology.

Genetic instability of plant tissue cultures: breakdown of normal controls.

S. Kaeppler, P. Olhoft, R. Phillips, 1994, Proceedings of the National Academy of Sciences of the United States of America.

Chromosome-level genome assembly of a regenerable maize inbred line A188

Nathan M. Springer, Cheng He, Sanzhen Liu, 2020, Genome Biology.

Extensive Genetic Diversity is Present within North American Switchgrass Germplasm

Megan Kennedy, Brieanne Vaillancourt, C Robin Buell, 2018, The plant genome.

Predicting Zea mays Flowering Time, Yield, and Kernel Dimensions by Analyzing Aerial Images

Nathan D. Miller, S. Kaeppler, E. Spalding, 2019, Front. Plant Sci..

Enhanced maize productivity by inoculation with diazotrophic bacteria

A. L. Iniguez, S. Kaeppler, M. Chelius, 2001 .

Transcriptional and Metabolic Analysis of Senescence Induced by Preventing Pollination in Maize1[W][OA]

R. Sekhon, C. Buell, S. Kaeppler, 2012, Plant Physiology.

Image analysis of anatomical traits in stalk transections of maize and other grasses

S. Kaeppler, E. Spalding, N. de Leon, 2015, Plant Methods.

PIONEER, SCHOLAR, MENTOR, AND GENTLEMAN

R. Kowles, S. Kaeppler, O. Riera-Lizarazu, 2009 .

Ronald L. Phillips: pioneer, scholar, mentor, and gentleman.

R. Kowles, S. Kaeppler, O. Riera-Lizarazu, 2009 .

The Switchgrass Genome: Tools and Strategies

J. Schmutz, C. Buell, S. Kaeppler, 2011 .

Nucleotide polymorphism and copy number variant detection using exome capture and next-generation sequencing in the polyploid grass Panicum virgatum

T. Richmond, J. Jeddeloh, D. J. Gerhardt, 2014, The Plant journal : for cell and molecular biology.

Assessing the Viability of Recovery of Hydroxycinnamic Acids from Lignocellulosic Biorefinery Alkaline Pretreatment Waste Streams.

C. Maravelias, J. Sedbrook, J. Coon, 2020, ChemSusChem.

Prediction of Cell Wall Properties and Response to Deconstruction Using Alkaline Pretreatment in Diverse Maize Genotypes Using Py-MBMS and NIR

Robert W. Sykes, D. Hodge, N. Leon, 2017, BioEnergy Research.

The Scientific Grand Challenges of the 21st Century for the Crop Science Society of America

K. Boote, T. Carter, R. Mitchell, 2012, Crop Science.

Genome-wide association analysis of stalk biomass and anatomical traits in maize

Joseph L. Gage, K. Barry, S. Kaeppler, 2019, BMC Plant Biology.

Cell-wall properties contributing to improved deconstruction by alkaline pre-treatment and enzymatic hydrolysis in diverse maize (Zea mays L.) lines

D. Hodge, S. Kaeppler, N. de Leon, 2015, Journal of experimental botany.

Genetic control of root anatomical plasticity in maize

J. Lynch, S. Kaeppler, K. Brown, 2020, The plant genome.

Quantitative trait locus mapping using sets of near-isogenic lines: relative power comparisons and technical considerations

S. Kaeppler, 1997, Theoretical and Applied Genetics.

Quantitative Trait Locus Mapping for Flowering Time in a Lowland × Upland Switchgrass Pseudo‐F2 Population

C. Buell, S. Kaeppler, M. Casler, 2018, The plant genome.

Estimation of Maize Yield and Flowering Time Using Multi-Temporal UAV-Based Hyperspectral Data

Zuxun Zhang, S. Kaeppler, N. de Leon, 2022, Remote. Sens..

Lax leaf maize: cell wall composition and nutritional value.

S. Kaeppler, R. Hatfield, J. Coors, 2000 .

Shared Genomic Regions Between Derivatives of a Large Segregating Population of Maize Identified Using Bulked Segregant Analysis Sequencing and Traditional Linkage Analysis

Timothy M. Beissinger, K. Barry, C. Buell, 2015, G3: Genes, Genomes, Genetics.

Variation and Inheritance of Small RNAs in Maize Inbreds and F1 Hybrids1[OPEN]

Peter A. Crisp, Nathan M. Springer, B. Meyers, 2019, Plant Physiology.

Short Small RNAs and heterosis in maize Variation and inheritance of small RNAs in maize inbreds and F 1 hybrids

Peter A. Crisp, Nathan M. Springer, K. Barry, 2019 .

Heritable Epigenomic Changes to the Maize Methylome Resulting from Tissue Culture

Peter A. Crisp, Nathan M. Springer, N. Springer, 2018, Genetics.

Targeted epigenomic changes to the maize methylome resulting from tissue culture

Peter A. Crisp, N. Springer, S. Kaeppler, 2018, bioRxiv.

Power analysis for quantitative trait locus mapping in populations derived by multiple backcrosses

S. Kaeppler, 1997, Theoretical and Applied Genetics.

Genome-wide scan for selection following thirty generations of artificial selection for increased number of ears per plant in the Golden Glow maize population

Timothy M. Beissinger, D. Gianola, K. Barry, 2013 .

Highly Genotype- and Tissue-specific Single-Parent Expression Drives Dynamic Gene Expression Complementation in Maize Hybrids

Alex B. Brohammer, Nathan M. Springer, K. Barry, 2019, bioRxiv.

Variation among maize inbred lines and detection of quantitative trait loci for growth at low phosphorus and responsiveness to arbuscular mycorrhizal fungi

S. Kaeppler, C. Stuber, L. Senior, 2000 .

Stover Composition in Maize and Sorghum Reveals Remarkable Genetic Variation and Plasticity for Carbohydrate Accumulation

Matthew W. Breitzman, R. Sekhon, S. Kaeppler, 2016, Front. Plant Sci..

Strong parallel evidence of selection during switchgrass sward establishment in hybrid and lowland ecotypes

S. Kaeppler, M. Casler, Zeng-Yu Wang, 2022, Grassland Research.

Large effect QTL explain natural phenotypic variation for the developmental timing of vegetative phase change in maize (Zea mays L.)

N. Leon, S. Kaeppler, Jillian M. Foerster, 2015, Theoretical and Applied Genetics.

Genome-wide associations with flowering time in switchgrass using exome-capture sequencing data.

K. Barry, C. Buell, P. Grabowski, 2017, The New phytologist.

Do We Understand Somaclonal Variation

S. Kaeppler, R. Phillips, V. Peschke, 1990 .

Utility of Climatic Information via Combining Ability Models to Improve Genomic Prediction for Yield Within the Genomes to Fields Maize Project

James C. Schnable, Carolyn J. Lawrence-Dill, Nathan M. Springer, 2021, Frontiers in Genetics.

DNA methylation and tissue culture-induced variation in plants

S. Kaeppler, R. Phillips, 1993, In Vitro Cellular & Developmental Biology - Plant.

Ac2 allele of maize identified in regenerant-derived progeny from tissue culture results from insertion of a novel transposon.

S. Kaeppler, K. Childs, Haining Lin, 2009 .

Chloroplast DNA and nuclear DNA content variations among cultivars of switchgrass

K. Vogel, S. Kaeppler, D. Lee, 1996 .

Relative utility of agronomic, phenological, and morphological traits for assessing genotype‐by‐environment interaction in maize inbreds

Darwin A. Campbell, Carolyn J. Lawrence-Dill, Nathan D. Miller, 2020, Crop Science.

Sequence Relationships, Conserved Domains, and Expression Patterns for Maize Homologs of the Polycomb Group GenesE(z), esc, andE(Pc) 1

Nathan M. Springer, T. Helentjaris, N. Springer, 2002, Plant Physiology.

Variability of chromosomal DNA contents in maize (Zea mays L.) inbred and hybrid lines

K. Fukui, Y. Chung, S. Kaeppler, 2002, Planta.

Correction: Genotype-by-environment interactions affecting heterosis in maize

Nathan D. Miller, P. Schnable, N. Springer, 2019, PloS one.

Introduction to a Special Issue on Genotype by Environment Interaction

N. Leon, S. Kaeppler, J. Jannink, 2016 .

Quantitative Trait Loci for Freezing Tolerance in a Lowland x Upland Switchgrass Population

C. Buell, S. Kaeppler, M. Casler, 2019, Front. Plant Sci..

Large effect QTL explain natural phenotypic variation for the developmental timing of vegetative phase change in maize (Zea mays L.)

N. Leon, S. Kaeppler, Jillian M. Foerster, 2015, Theoretical and Applied Genetics.

Synchronization of cell division in root tips of seven major cereal species for high yields of metaphase chromosomes for flow-cytometric analysis and sorting

S. Kaeppler, K. Arumuganathan, H. Kaeppler, 1997, Plant Molecular Biology Reporter.

Induction of maize acid phosphatase activities under phosphorus starvation

S. Kaeppler, S. Yun, 2001, Plant and Soil.

Cell synchronization and isolation of metaphase chromosomes from maize (Zea mays L.) root tips for flow cytometric analysis and sorting.

S. Kaeppler, K. Arumuganathan, H. Kaeppler, 1996, Genome.

A novel high-throughput hyperspectral scanner and analytical methods for predicting maize kernel composition and physical traits.

Nathan D. Miller, S. Kaeppler, E. Spalding, 2022, Food Chemistry.

Assessing the Efficiency of RNA Interference for Maize Functional Genomics1[W][OA]

Nick Murphy, N. Springer, K. McGinnis, 2007, Plant Physiology.

Root tip cell cycle synchronization and metaphase-chromosome isolation suitable for flow sorting in common wheat (Triticum aestivum L.).

S. Kaeppler, P. S. Baenziger, K. Arumuganathan, 1997, Genome.

A Genome-Wide Scan for Evidence of Selection in a Maize Population Under Long-Term Artificial Selection for Ear Number

D. Gianola, K. Barry, C. Buell, 2013, Genetics.

The importance of dominance and genotype-by-environment interactions on grain yield variation in a large-scale public cooperative maize experiment.

Nathan M. Springer, Jason G. Wallace, P. Schnable, 2021, G3.

MOLECULAR MARKERS ASSOCIATED WITH PLANT ARCHITECTURE AND RESISTANCE TO COMMON BLIGHT, WEB BLIGHT, AND RUST IN COMMON BEANS

S. Kaeppler, J. Beaver, G. Jung, 1996 .

Molecular-marker-based Genetic Analysis of Tepary Bean-derived Common Bacterial Blight Resistance in Different Developmental Stages of Common Bean

S. Kaeppler, G. Jung, J. Nienhuis, 1997 .

Formation of Heterotic Groups and Understanding Genetic Effects in a Provitamin A Biofortified Maize Breeding Program

S. Kaeppler, N. Palacios-Rojas, R. Babu, 2014 .

Tissue culture-induced DNA methylation variation in maize.

S. Kaeppler, R. Phillips, R L Phillips, 1993, Proceedings of the National Academy of Sciences of the United States of America.

B73-Mo17 Near-Isogenic Lines Demonstrate Dispersed Structural Variation in Maize1[W][OA]

Nathan M. Springer, Steven R. Eichten, Sanzhen Liu, 2011, Plant Physiology.

Integrated Genome-Scale Analysis Identifies Novel Genes and Networks Underlying Senescence in Maize[OPEN]

Matthew W. Breitzman, Timothy M. Beissinger, R. Sekhon, 2019, Plant Cell.

Root angle in maize influences nitrogen capture and is regulated by calcineurin B‐like protein (CBL)‐interacting serine/threonine‐protein kinase 15 ( ZmCIPK15 )

M. Bennett, J. Lynch, S. Kaeppler, 2021, Plant, cell & environment.

Generating novel plant genetic variation via genome editing to escape the breeding lottery

S. Kaeppler, H. Kaeppler, Nathaniel Schleif, 2021, In Vitro Cellular & Developmental Biology - Plant.

Genetic Perturbation of the Maize Methylome[W]

Nathan M. Springer, Steven R. Eichten, T. Richmond, 2014, Plant Cell.

Correction: Maize Gene Atlas Developed by RNA Sequencing and Comparative Evaluation of Transcriptomes Based on RNA Sequencing and Microarrays

C. Myers, R. Sekhon, C. Buell, 2014, PLoS ONE.

Maize Gene Atlas Developed by RNA Sequencing and Comparative Evaluation of Transcriptomes Based on RNA Sequencing and Microarrays

C. Robin Buell, Chad L. Myers, Shawn M. Kaeppler, 2013, PloS one.

Autophagic Recycling Plays a Central Role in Maize Nitrogen Remobilization

R. Vierstra, S. Kaeppler, J. Pennington, 2015, Plant Cell.

Maize (Zea mays L.) Genome Diversity as Revealed by RNA-Sequencing

C. Robin Buell, Brieanne Vaillancourt, Shawn M. Kaeppler, 2012, PloS one.

Conserved plant genes with similarity to mammalian de novo DNA methyltransferases.

Nathan M. Springer, S. Jacobsen, N. Springer, 2000, Proceedings of the National Academy of Sciences of the United States of America.

Comparative Analysis of SET Domain Proteins in Maize and Arabidopsis Reveals Multiple Duplications Preceding the Divergence of Monocots and Dicots1[w]

Nathan M. Springer, V. Chandler, C. Napoli, 2003, Plant Physiology.

Marker Density and Read Depth for Genotyping Populations Using Genotyping-by-Sequencing

C. Robin Buell, Brieanne Vaillancourt, Shawn M. Kaeppler, 2013, Genetics.

Epigenetics : The Second Genetic Code

Nathan M. Springer, N. Springer, S. Kaeppler, 2013 .

Chapter 3 Epigenetics. The Second Genetic Code

Nathan M. Springer, N. Springer, S. Kaeppler, 2008 .

Maize root growth angles become steeper under low N conditions

J. Lynch, S. Kaeppler, S. Trachsel, 2013 .

Defining window-boundaries for genomic analyses using smoothing spline techniques

Timothy M. Beissinger, D. Gianola, G. Rosa, 2015, Genetics Selection Evolution.

QTL mapping and phenotypic variation of root anatomical traits in maize (Zea mays L.)

J. Lynch, S. Kaeppler, K. Brown, 2014, Theoretical and Applied Genetics.

QTL mapping and phenotypic variation for root architectural traits in maize (Zea mays L.)

J. Lynch, C. Buell, S. Kaeppler, 2014, Theoretical and Applied Genetics.

Detection of quantitative trait loci for seminal root traits in maize (Zea mays L.) seedlings grown under differential phosphorus levels

Shawn M. Kaeppler, Jonathan P. Lynch, J. Lynch, 2006, Theoretical and Applied Genetics.

Mapping of QTLs for lateral root branching and length in maize (Zea mays L.) under differential phosphorus supply

J. Lynch, S. Kaeppler, Jinming Zhu, 2005, Theoretical and Applied Genetics.

Whole Transcriptome Profiling of Maize during Early Somatic Embryogenesis Reveals Altered Expression of Stress Factors and Embryogenesis-Related Genes

C. Buell, S. Kaeppler, C. Hirsch, 2014, PloS one.

Molecular Basis of Heritable Tissue Culture-induced Variation in Plants

Ronald L. Phillips, Shawn M. Kaeppler, S. Kaeppler, 1998 .

Post-glacial evolution of Panicum virgatum: centers of diversity and gene pools revealed by SSR markers and cpDNA sequences

D. L. Price, Andrew R. Jakubowski, S. Kaeppler, 2011, Genetica.

Selection Signatures in Four Lignin Genes from Switchgrass Populations Divergently Selected for In Vitro Dry Matter Digestibility

K. Vogel, S. Kaeppler, M. Casler, 2016, PloS one.

Nuclear DNA Content and Chromosome Numbers in Switchgrass

Shawn M. Kaeppler, Kenneth P. Vogel, Donald J. Lee, 1998 .

Genetic control of root architectural plasticity in maize

J. Lynch, S. Kaeppler, K. Brown, 2020, Journal of experimental botany.

TCUP: A Novel hAT Transposon Active in Maize Tissue Culture

Alan M. Smith, S. Kaeppler, Candice N. Hansey, 2012, Front. Plant Sci..

Genetic Fine‐Mapping of a Quantitative Trait Locus (QTL) Associated with Embryogenic Tissue Culture Response and Plant Regeneration Ability in Maize (Zea mays L.)

S. Kaeppler, C. Hirsch, H. Kaeppler, 2018, The plant genome.

Heterosis: Many Genes, Many Mechanisms—End the Search for an Undiscovered Unifying Theory

S. Kaeppler, 2012 .

Use of near-isogenic lines derived by backcrossing or selfing to map qualitative traits

S. Kaeppler, R. Phillips, T. S. Kim, 1993, Theoretical and Applied Genetics.

The Genetic Architecture of Maize Stalk Strength

Edward S. Buckler, Michael D. McMullen, Shawn M. Kaeppler, 2013, PloS one.

Genotype-by-environment interactions affecting heterosis in maize

Nathan D. Miller, Nathan M. Springer, P. Schnable, 2017, bioRxiv.

DESIGN, PRODUCTION, AND UTILIZATION OF LONG OLIGONUCLEOTIDE MICROARRAYS FOR EXPRESSION ANALYSIS IN MAIZE

D. Galbraith, A. L. Iniguez, L. Zheng, 2005 .

Integrated Genome-Scale Analysis Identifies Novel Genes and Networks Underlying Senescence in Maize.

Matthew W. Breitzman, R. Sekhon, B. Flinn, 2019, The Plant cell.

Plant science decadal vision 2020–2030: Reimagining the potential of plants for a healthy and sustainable future

Philip Benfey, Felipe Zapata, Thomas Wentworth, 2020, Plant direct.

Genome-wide association analysis of stalk biomass and anatomical traits in maize

Joseph L. Gage, K. Barry, S. Kaeppler, 2019, BMC Plant Biology.

Variation and Inheritance of Small RNAs in Maize Inbreds and F1 Hybrids1[OPEN]

Peter A. Crisp, B. Meyers, K. Barry, 2019, Plant Physiology.

Draft Assembly of Elite Inbred Line PH207 Provides Insights into Genomic and Transcriptome Diversity in Maize[OPEN]

Kevin L. Childs, C. Robin Buell, Christopher J. Fields, 2016, Plant Cell.

Maize Chromomethylase Zea methyltransferase2 Is Required for CpNpG Methylation

Nathan M. Springer, N. Springer, S. Kaeppler, 2001, The Plant Cell Online.

Natural Variation for Alleles Under Epigenetic Control by the Maize Chromomethylase Zmet2

A. L. Iniguez, R. Stupar, W. Barbazuk, 2007, Genetics.

Tissue Culture-Induced Novel Epialleles of a Myb Transcription Factor Encoded by pericarp color1 in Maize

R. Sekhon, S. Kaeppler, Y. Rhee, 2010, Genetics.

Chromatin, DNA Methylation, RNAi and Epigenetic Regulation

S. Kaeppler, 2009 .

Genetic Control of Prolificacy and Related Traits in the Golden Glow Maize Population

N. Leon, S. Kaeppler, J. Coors, 2005 .

Diversity and population structure of northern switchgrass as revealed through exome capture sequencing.

Brieanne Vaillancourt, Jeremy Schmutz, Kerrie Barry, 2015, The Plant journal : for cell and molecular biology.

Molecular Mapping of Loci for Agronomic Traits on Chromosome 3A of Bread Wheat

M. Shah, S. Kaeppler, P. S. Baenziger, 1999 .

Genetic Diversity of a Maize Association Population with Restricted Phenology

Shawn M. Kaeppler, R. Sekhon, N. Leon, 2011 .

Genetic loci associated with winter survivorship in diverse lowland switchgrass populations

C. Buell, S. Kaeppler, M. Casler, 2021, The plant genome.

Phenotypic and Transcriptional Analysis of Divergently Selected Maize Populations Reveals the Role of Developmental Timing in Seed Size Determination1[W][OPEN]

Matthew W. Breitzman, R. Sekhon, C. Buell, 2014, Plant Physiology.

Diversity and heterotic patterns in North American proprietary dent maize germplasm

M. Mikel, N. Leon, S. Kaeppler, 2020 .

Selection Signatures Underlying Dramatic Male Inflorescence Transformation During Modern Hybrid Maize Breeding

Joseph L. Gage, S. Kaeppler, N. de Leon, 2018, Genetics.

Suppression of CINNAMOYL-CoA REDUCTASE increases the level of monolignol ferulates incorporated into maize lignins

R. Sekhon, J. Sedbrook, S. Mansfield, 2017, Biotechnology for Biofuels.

Genomic Prediction for Winter Survival of Lowland Switchgrass in the Northern USA

C. Buell, S. Kaeppler, M. Casler, 2019, G3: Genes, Genomes, Genetics.

Natural Hybrids and Gene Flow between Upland and Lowland Switchgrass

D. L. Price, Andrew R. Jakubowski, S. Kaeppler, 2011 .

Maize sugary enhancer1 (se1) is a gene affecting endosperm starch metabolism

Vai S. Lor, S. Kaeppler, C. Hirsch, 2019, Proceedings of the National Academy of Sciences.

Insights into the Effects of Long-Term Artificial Selection on Seed Size in Maize

Timothy M. Beissinger, Nathan M. Springer, Steven R. Eichten, 2014, Genetics.

Loss-of-function of DELLA protein SLN1 activates GA signaling in barley aleurone

B. Yandell, S. Kaeppler, Kegui Chen, 2010, Acta Physiologiae Plantarum.

Testcross vs. randomly paired single‐cross progeny tests for genomic prediction of new inbreds and hybrids derived from multiparent maize populations

N. Leon, S. Kaeppler, B. Burdo, 2021, Crop Science.

Response to selection and genetic drift in three populations derived from the golden glow maize population

S. Kaeppler, J. Coors, H. D. Silva, 2004 .

Evidence for maternal control of seed size in maize from phenotypic and transcriptional analysis

R. Sekhon, S. Kaeppler, N. de Leon, 2016, Journal of experimental botany.

Genomic imprinting, methylation and molecular evolution of maize Enhancer of zeste (Mez) homologs.

U. Grossniklaus, C. Spillane, N. Springer, 2007, The Plant journal : for cell and molecular biology.

Characterization of a novel maize retrotransposon family sprite that shows high levels of variability among maize inbred lines

Steven R. Eichten, N. Springer, S. Kaeppler, 2009 .

Multiple Maize Reference Genomes Impact the Identification of Variants by Genome‐Wide Association Study in a Diverse Inbred Panel

Joseph L. Gage, K. Barry, C. Buell, 2019, The plant genome.

Genetic mapping of flowering time and plant height in a maize Stiff Stalk MAGIC population

Y. Yoshinaga, K. Broman, K. Barry, 2022, bioRxiv.

Genomic variation within the maize stiff‐stalk heterotic germplasm pool

Arun S. Seetharam, S. Shu, Y. Yoshinaga, 2021, The plant genome.

QTL mapping and phenotypic variation for root architectural traits in maize (Zea mays L.)

J. Lynch, C. Buell, S. Kaeppler, 2014, Theoretical and Applied Genetics.

Topsoil foraging and phosphorus acquisition efficiency in maize (Zea mays).

J. Lynch, S. Kaeppler, Jinming Zhu, 2005, Functional plant biology : FPB.

Genome Analysis B 73-Mo 17 Near-Isogenic Lines Demonstrate Dispersed Structural Variation in Maize 1 [ W ] [ OA ]

Nathan M. Springer, Steven R. Eichten, Sanzhen Liu, 2011 .

Genetic Analysis of Sugarcane mosaic virus Resistance in the Wisconsin Diversity Panel of Maize

N. Leon, S. Kaeppler, W. Tracy, 2018, Crop Science.

A PCR assay for detection of a 2RL.2BS wheat-rye chromosome translocation.

S. Kaeppler, R. Graybosch, R. Sears, 1996, Genome.

A practical method to improve the efficiency of pollination in maize breeding and genetics research

N. Leon, S. Kaeppler, H. Kaeppler, 2023, bioRxiv.

A robust, high‐throughput method for computing maize ear, cob, and kernel attributes automatically from images

Shawn M. Kaeppler, Nathan D. Miller, Edgar P. Spalding, 2017, The Plant journal : for cell and molecular biology.

Genetic Analysis of Cell Wall Traits Relevant to Cellulosic Ethanol Production in Maize (Zea mays L.)

N. Leon, S. Kaeppler, J. Coors, 2010 .

Impacts of Agricultural Nitrogen on the Environment and Strategies to Reduce these Impacts

Michael Udvardi, Shawn M. Kaeppler, Eoin L. Brodie, 2015 .

Genetic control of prolificacy and related traits in the golden glow maize population: I. Phenotypic evaluation

G. Rosa, N. Leon, S. Kaeppler, 2005 .

PHOSPHORUS ACCUMULATION IN MAIZE GRAIN IS NOT INFLUENCED BY XENIA (Zea mays L.)

S. Kaeppler, L. A. Pletsch-Rivera, 2007 .

A machine vision platform for measuring imbibition of maize kernels: quantification of genetic effects and correlations with germination

Nathan D. Miller, S. Kaeppler, E. Spalding, 2018, Plant Methods.

Genome-wide association analysis reveals new targets for carotenoid biofortification in maize

S. Kaeppler, N. Palacios-Rojas, R. Babu, 2015, Theoretical and Applied Genetics.

Evaluation of six mycorrhizal isolates for their ability to promote growth of maize genotypes under phosphorus deficiency [Zea mays L.]

S. Kaeppler, S. Mickelson, 2005 .

Transcription factor bHLH121 regulates root cortical aerenchyma formation in maize

Vai S. Lor, M. Bennett, J. Lynch, 2023, Proceedings of the National Academy of Sciences of the United States of America.

Registration of the NyH (Ny821×H99) Maize Recombinant Inbred Mapping Population

N. Leon, S. Kaeppler, James M. Johnson, 2016 .

Maize Genomes to Fields: 2014 and 2015 field season genotype, phenotype, environment, and inbred ear image datasets

Patrick S. Schnable, Seth C. Murray, Michael A. Gore, 2018, BMC Research Notes.

TIPS: a system for automated image-based phenotyping of maize tassels

Joseph L. Gage, Nathan D. Miller, S. Kaeppler, 2017, Plant Methods.

Image analysis of anatomical traits in stalk transections of maize and other grasses

S. Kaeppler, E. Spalding, N. de Leon, 2015, Plant Methods.

Genetic Variability Among Maize Inbred Lines for Resistance to the High Plains Virus-Wheat Streak Mosaic Virus Complex.

S. Kaeppler, S. Jensen, A. Marcon, 1997, Plant Disease.

Resistance to Systemic Spread of High Plains Virus and Wheat Streak Mosaic Virus Cosegregates in Two F2 Maize Populations Inoculated with Both Pathogens

S. Kaeppler, S. Jensen, A. Marcon, 1997 .

Loci Controlling Resistance to High Plains Virus and Wheat Streak Mosaic Virus in a B73 × Mo17 Population of Maize

S. Kaeppler, C. Stuber, L. Senior, 1999 .

Registration of the OhW (Oh43×W64A) Maize Recombinant Inbred Mapping Population

N. Leon, S. Kaeppler, James M. Johnson, 2016 .

IntegrateNet: A Deep Learning Network for Maize Stand Counting From UAV Imagery by Integrating Density and Local Count Maps

Zuxun Zhang, S. Kaeppler, Biwen Wang, 2022, IEEE Geoscience and Remote Sensing Letters.

Genome-wide association analysis reveals new targets for carotenoid biofortification in maize

S. Kaeppler, N. Palacios-Rojas, R. Babu, 2015, Theoretical and Applied Genetics.

Transcriptional Analysis of Flowering Time in Switchgrass

C. Buell, S. Kaeppler, M. Casler, 2017, BioEnergy Research.

Single-parent expression drives dynamic gene expression complementation in maize hybrids.

Christine H. O’Connor, Alex B. Brohammer, Nathan M. Springer, 2020, The Plant journal : for cell and molecular biology.

Characterizing introgression-by-environment interactions using maize near isogenic lines

Nathan D. Miller, Nathan M. Springer, P. Schnable, 2020, Theoretical and Applied Genetics.

A high-throughput core sampling device for the evaluation of maize stalk composition

S. Kaeppler, N. de Leon, N. Santoro, 2012, Biotechnology for Biofuels.

Consistent and Heritable Alterations of DNA Methylation Are Induced by Tissue Culture in Maize

Nathan M. Springer, Steven R. Eichten, N. Springer, 2014, Genetics.

Plot-Level Maize Early Stage Stand Counting and Spacing Detection Using Advanced Deep Learning Algorithms Based on UAV Imagery

Zuxun Zhang, Jing Zhou, S. Kaeppler, 2023, Agronomy.

QTL mapping and phenotypic variation of root anatomical traits in maize (Zea mays L.)

J. Lynch, S. Kaeppler, K. Brown, 2014, Theoretical and Applied Genetics.

Registration of N211, N217, and N218 parental inbred lines of maize

W. A. Compton, S. Kaeppler, B. Doupnik, 1998 .

Heterosis: one boat at a time, or a rising tide?

S. Kaeppler, 2011, The New phytologist.

Maize genomes to fields (G2F): 2014–2017 field seasons: genotype, phenotype, climatic, soil, and inbred ear image datasets

Patrick S. Schnable, Seth C. Murray, Joseph L. Gage, 2020, BMC Research Notes.

Genomes to Fields 2022 Maize genotype by Environment Prediction Competition

Joseph L. Gage, Jacob D. Washburn, Jason G. Wallace, 2023, BMC Research Notes.

A Genome-Wide Scan for Evidence of Selection in a Maize Population Under Long-Term Artificial Selection for Ear Number

Timothy M. Beissinger, D. Gianola, K. Barry, 2013, Genetics.

Extensive Genetic Diversity is Present within North American Switchgrass Germplasm

J. Schmutz, J. Jenkins, K. Barry, 2018, The plant genome.

Short Small RNAs and heterosis in maize Variation and inheritance of small RNAs in maize inbreds and F 1 hybrids

Peter A. Crisp, Nathan M. Springer, K. Barry, 2019 .

Multiple Maize Reference Genomes Impact the Identification of Variants by Genome‐Wide Association Study in a Diverse Inbred Panel

Joseph L. Gage, K. Barry, N. Leon, 2019, The plant genome.

A key to totipotency: Wuschel‐like homeobox 2a unlocks embryogenic culture response in maize (Zea mays L.)

S. Kaeppler, H. Kaeppler, B. Martinell, 2023, Plant biotechnology journal.

Genetic analysis of pericarp pigmentation variation in Corn Belt dent maize

S. Kaeppler, Y. Qiu, C. Hirsch, 2023, G3.

Characterizing allele-by-environment interactions using maize introgression lines

Nathan D. Miller, Nathan M. Springer, P. Schnable, 2019, bioRxiv.

A machine vision platform for measuring imbibition of maize kernels: quantification of genetic effects and correlations with germination

Nathan D. Miller, S. Kaeppler, E. Spalding, 2018, Plant Methods.

Effect of Endosperm Type and Storage Length of Whole Plant Corn Silage on Nitrogen Fraction, Fermentation Products, Zein Profile and Starch Digestibility.

S. Kaeppler, L. Ferraretto, Natalia de León, 2023, Journal of dairy science.

Effects of endosperm type and storage length of whole-plant corn silage on nitrogen fraction, fermentation products, zein profile, and starch digestibility

S. Kaeppler, L. Ferraretto, N. D. León, 2022 .

Topsoil foraging and phosphorus acquisition efficiency in maize (Zea mays).

J. Lynch, S. Kaeppler, Jinming Zhu, 2005, Functional plant biology : FPB.

Correction: Genotype-by-environment interactions affecting heterosis in maize

Nathan D. Miller, Nathan M. Springer, P. Schnable, 2019, PloS one.

Defining window-boundaries for genomic analyses using smoothing spline techniques

Daniel Gianola, Timothy M Beissinger, Timothy M. Beissinger, 2015, Genetics Selection Evolution.