D. Loqué

发表

Next-generation biomass feedstocks for biofuel production

Dominique Loque, Blake A Simmons, Harvey W Blanch, 2008, Genome Biology.

Molecular and cellular approaches for the detection of protein-protein interactions: latest techniques and current limitations.

Sylvie Lalonde, Seung Y Rhee, David W Ehrhardt, 2008, The Plant journal : for cell and molecular biology.

Engineering secondary cell wall deposition in plants

M. Auer, H. Scheller, D. Loqué, 2012, Plant biotechnology journal.

The Selaginella Genome Identifies Genetic Changes Associated with the Evolution of Vascular Plants

Michael S. Barker, M. Gribskov, J. Bennetzen, 2011, Science.

Nitrogen-Dependent Posttranscriptional Regulation of the Ammonium Transporter AtAMT1;11[W][OA]

W. Frommer, N. von Wirén, D. Loqué, 2006, Plant Physiology.

Additive contribution of AMT1;1 and AMT1;3 to high-affinity ammonium uptake across the plasma membrane of nitrogen-deficient Arabidopsis roots.

Lixing Yuan, Alain Gojon, N. von Wirén, 2006, The Plant journal : for cell and molecular biology.

A Membrane Protein/Signaling Protein Interaction Network for Arabidopsis Version AMPv2

Guillaume Pilot, Seung Y. Rhee, Sarah M. Assmann, 2010, Front. Physio..

Expression of a bacterial 3-dehydroshikimate dehydratase (QsuB) reduces lignin and improves biomass saccharification efficiency in switchgrass (Panicum virgatum L.)

H. Scheller, D. Loqué, P. Ronald, 2021, BMC Plant Biology.

A transgene design for enhancing oil content in Arabidopsis and Camelina seeds

Grace Q Chen, H. Scheller, D. Loqué, 2018, Biotechnology for Biofuels.

Tight regulation of plant immune responses by combining promoter and suicide exon elements

Yan Liang, D. Loqué, B. Staskawicz, 2015, Nucleic acids research.

Production of muconic acid in plants.

D. Loqué, E. Baidoo, V. Benites, 2018, Metabolic engineering.

Expression of a bacterial 3‐dehydroshikimate dehydratase reduces lignin content and improves biomass saccharification efficiency

J. Keasling, B. Simmons, Seema Singh, 2015, Plant biotechnology journal.

Engineering of plant cell walls for enhanced biofuel production.

M. Pauly, H. Scheller, D. Loqué, 2015, Current opinion in plant biology.

Dynamic root exudate chemistry and microbial substrate preferences drive patterns in rhizosphere microbial community assembly

Eoin L. Brodie, U. Karaoz, M. Firestone, 2018, Nature Microbiology.

Production of hydroxycinnamoyl anthranilates from glucose in Escherichia coli

J. Keasling, D. Juminaga, D. Loqué, 2013, Microbial Cell Factories.

Pore Mutations in Ammonium Transporter AMT1 with Increased Electrogenic Ammonium Transport Activity*

W. Frommer, D. Loqué, S. Andrade, 2009, The Journal of Biological Chemistry.

Increased drought tolerance in plants engineered for low lignin and low xylan content

H. Scheller, P. Shih, D. Loqué, 2018, Biotechnology for Biofuels.

Exploiting the Substrate Promiscuity of Hydroxycinnamoyl-CoA:Shikimate Hydroxycinnamoyl Transferase to Reduce Lignin

J. H. Pereira, J. Keasling, P. Adams, 2016, Plant & cell physiology.

Expression of S-adenosylmethionine Hydrolase in Tissues Synthesizing Secondary Cell Walls Alters Specific Methylated Cell Wall Fractions and Improves Biomass Digestibility

J. Keasling, B. Simmons, T. Lee, 2016, Front. Bioeng. Biotechnol..

Title : Exploiting The Substrate Promiscuity of Hydroxycinnamoyl-CoA : shikimate Hydroxycinnamoyl Transferase to Reduce Lignin Running title : Substrate promiscuity of HCT and lignin reduction Corresponding

J. H. Pereira, J. Keasling, P. Adams, 2016 .

Restricting lignin and enhancing sugar deposition in secondary cell walls enhances monomeric sugar release after low temperature ionic liquid pretreatment

B. Simmons, Seema Singh, D. Loqué, 2015, Biotechnology for Biofuels.

Lignin Valorization: Two Hybrid Biochemical Routes for the Conversion of Polymeric Lignin into Value-added Chemicals

Arul M. Varman, Seema Singh, D. Loqué, 2017, Scientific Reports.

Visualization of plant cell wall lignification using fluorescence-tagged monolignols

W. Boerjan, C. Chapple, J. Ralph, 2013, The Plant journal : for cell and molecular biology.

A gene stacking approach leads to engineered plants with highly increased galactan levels in Arabidopsis

H. Scheller, D. Loqué, Berit Ebert, 2014, BMC Plant Biology.

Biotechnology and synthetic biology approaches for metabolic engineering of bioenergy crops.

Yan Liang, P. Shih, D. Loqué, 2016, The Plant journal : for cell and molecular biology.

Breakthrough Technologies Isolation and Proteomic Characterization of the Arabidopsis Golgi De fi nes Functional and Novel Components Involved in Plant Cell Wall Biosynthesis 1 [ W ] [ OA ]

M. Auer, C. Petzold, A. Mukhopadhyay, 2012 .

Gene Expression of the NO3– Transporter NRT1.1 and the Nitrate Reductase NIA1 Is Repressed in Arabidopsis Roots by NO2–, the Product of NO3– Reduction

D. Loqué, P. Tillard, A. Gojon, 2003, Plant Physiology.

Endoribonuclease-Based Two-Component Repressor Systems for Tight Gene Expression Control in Plants.

J. Keasling, S. Richardson, A. Mukhopadhyay, 2017, ACS synthetic biology.

Histochemical staining of Arabidopsis thaliana secondary cell wall elements.

D. Loqué, Prajakta Pradhan Mitra, 2014, Journal of visualized experiments : JoVE.

Overexpression of a rice BAHD acyltransferase gene in switchgrass (Panicum virgatum L.) enhances saccharification

J. Keasling, H. Scheller, Seema Singh, 2018, BMC Biotechnology.

Influence of hydrocracking and ionic liquid pretreatments on composition and properties of Arabidopsis thaliana wild type and CAD mutant lignins

Kwang Ho Kim, B. Simmons, A. Richel, 2020, Renewable Energy.

A new approach to zip‐lignin: 3,4‐dihydroxybenzoate is compatible with lignification

S. Mansfield, J. Ralph, D. Loqué, 2022, The New phytologist.

The plant glycosyltransferase clone collection for functional genomics.

Susana M. González Fernández-Niño, P. Adams, Hector A Plahar, 2014, The Plant Journal.

Allosteric Regulation of Transport Activity by Heterotrimerization of Arabidopsis Ammonium Transporter Complexes in Vivo[C][W][OA]

W. Frommer, Y. Xuan, N. von Wirén, 2013, Plant Cell.

Mechanical Stress Analysis as a Method to Understand the Impact of Genetically Engineered Rice and Arabidopsis Plants

B. Simmons, P. Adams, M. Auer, 2012 .

Increased drought tolerance in plants engineered for low and low content.

H. Scheller, P. Shih, D. Loqué, 2018 .

SbCOMT (Bmr12) is involved in the biosynthesis of tricin-lignin in sorghum

B. Simmons, T. Northen, S. Sattler, 2017, PloS one.

Gene Expression of the NO 3 (cid:1) Transporter NRT1.1 and the Nitrate Reductase NIA1 Is Repressed in Arabidopsis Roots by NO 2 (cid:1) , the Product of NO 3 (cid:1) Reduction

D. Loqué, P. Tillard, A. Gojon, 2003 .

Draft Genome Sequence of Raoultella terrigena R1Gly, a Diazotrophic Endophyte

N. Shapiro, T. Woyke, R. Chakraborty, 2015, Genome Announcements.

Precursor-Directed Combinatorial Biosynthesis of Cinnamoyl, Dihydrocinnamoyl, and Benzoyl Anthranilates in Saccharomyces cerevisiae

J. Keasling, T. Lee, D. Loqué, 2015, PloS one.

Lignin bioengineering.

Yan Liang, D. Loqué, P. Mitra, 2014, Current opinion in biotechnology.

Production of tranilast [N-(3′,4′-dimethoxycinnamoyl)-anthranilic acid] and its analogs in yeast Saccharomyces cerevisiae

J. Keasling, M. Hadi, D. Loqué, 2011, Applied Microbiology and Biotechnology.

Regulatory levels for the transport of ammonium in plant roots.

N. von Wirén, D. Loqué, 2004, Journal of experimental botany.

Tonoplast Intrinsic Proteins AtTIP2;1 and AtTIP2;3 Facilitate NH3 Transport into the Vacuole1

N. von Wirén, D. Loqué, U. Ludewig, 2005, Plant Physiology.

Biochemical characterization of Arabidopsis APYRASE family reveals their roles in regulating endomembrane NDP/NMP homoeostasis.

D. Loqué, T. Chiu, J. Heazlewood, 2015, The Biochemical journal.

Biosynthesis and incorporation of side-chain-truncated lignin monomers to reduce lignin polymerization and enhance saccharification.

Seema Singh, Jay D Keasling, Fan Yang, 2012, Plant biotechnology journal.

Plant plasma membrane water channels conduct the signalling molecule H2O2.

D. Loqué, U. Ludewig, M. Dynowski, 2008, The Biochemical journal.

Feedback Inhibition of Ammonium Uptake by a Phospho-Dependent Allosteric Mechanism in Arabidopsis[W]

W. Frommer, N. von Wirén, D. Loqué, 2009, The Plant Cell Online.

The Organization of High-Affinity Ammonium Uptake in Arabidopsis Roots Depends on the Spatial Arrangement and Biochemical Properties of AMT1-Type Transporters[W]

N. von Wirén, Hideki Takahashi, S. Kojima, 2007, The Plant Cell Online.

Isolation and Proteomic Characterization of the Arabidopsis Golgi Defines Functional and Novel Components Involved in Plant Cell Wall Biosynthesis1[W][OA]

Bernhard Knierim, Joshua L. Heazlewood, Aindrila Mukhopadhyay, 2012, Plant Physiology.

Advances in modifying lignin for enhanced biofuel production.

John Ralph, Blake A Simmons, B. Simmons, 2010, Current opinion in plant biology.

AtAMT1;4, a Pollen-Specific High-Affinity Ammonium Transporter of the Plasma Membrane in Arabidopsis

N. von Wirén, Hideki Takahashi, S. Kojima, 2008, Plant & cell physiology.

AtAPY1 and AtAPY2 function as Golgi-localized nucleoside diphosphatases in Arabidopsis thaliana.

D. Loqué, A. Orellana, T. Chiu, 2012, Plant & cell physiology.

The Arabidopsis thaliana nucleotide sugar transporter GONST2 is a functional homolog of GONST1

D. Kliebenstein, M. Kawai‐Yamada, P. Dupree, 2021, Plant direct.

GONST2 transports GDP-Mannose for sphingolipid glycosylation in the Golgi apparatus of Arabidopsis

D. Kliebenstein, Yan Liang, M. Kawai‐Yamada, 2018, bioRxiv.

Amino Acid Transporter Inventory of the Selaginella Genome

W. Frommer, D. Loqué, D. Wipf, 2012, Front. Plant Sci..

Design of orthogonal regulatory systems for modulating gene expression in plants

Mitchell G. Thompson, Patrick M. Shih, H. Scheller, 2020, Nature Chemical Biology.

Standards for plant synthetic biology: a common syntax for exchange of DNA parts.

Christian Rogers, Diego Orzaez, Antonio Granell, 2015, The New phytologist.

Engineering temporal accumulation of a low recalcitrance polysaccharide leads to increased C6 sugar content in plant cell walls.

Fan Yang, Thomas Herter, J. Keasling, 2015, Plant biotechnology journal.

Rapid determination of syringyl: Guaiacyl ratios using FT‐Raman spectroscopy

B. Simmons, Seema Singh, D. Loqué, 2012, Biotechnology and bioengineering.

Plant Cell Walls: Improved Resources for Biofuels and Value‐Added Products through Genetic Engineering

D. Loqué, Zhangying Hao, 2017 .

Ammonium and Urea Transporter Inventory of the Selaginella and Physcomitrella Genomes

W. Frommer, D. Loqué, S. Lalonde, 2012, Front. Plant Sci..

A robust gene-stacking method utilizing yeast assembly for plant synthetic biology

Benjamin P. Bowen, Trent R. Northen, Patrick M. Shih, 2016, Nature Communications.

A cytosolic trans-activation domain essential for ammonium uptake

L. Looger, W. Frommer, D. Loqué, 2007, Nature.

Title Tight regulation of plant immune responses bycombining promoter and suicide exon elements Permalink

Yan Liang, D. Loqué, B. Staskawicz, 2015 .

Development of a High Throughput Platform for Screening Glycoside Hydrolases Based on Oxime-NIMS

Taichi E. Takasuka, S. Deutsch, B. Simmons, 2015, Front. Bioeng. Biotechnol..

Engineering Plant Synthetic Pathways for the Biosynthesis of Novel Antifungals

J. Keasling, P. Shih, D. Loqué, 2020, ACS central science.

Fluorescent sensors reporting the activity of ammonium transceptors in live cells

W. Frommer, M. Kumke, D. Loqué, 2013, eLife.

Dynamic root exudate chemistry and microbial substrate preferences drive patterns in rhizosphere microbial community assembly

Eoin L. Brodie, U. Karaoz, M. Firestone, 2018, Nature Microbiology.

A screening method to identify efficient sgRNAs in Arabidopsis, used in conjunction with cell-specific lignin reduction

Yan Liang, H. Scheller, D. Loqué, 2019, Biotechnology for Biofuels.

A gene stacking approach leads to engineered plants with highly increased galactan levels in Arabidopsis

H. Scheller, D. Loqué, Berit Ebert, 2014, BMC Plant Biology.

Gene stacking of multiple traits for high yield of fermentable sugars in plant biomass

H. Scheller, P. Shih, D. Loqué, 2018, Biotechnology for Biofuels.

Engineering of plants with improved properties as biofuels feedstocks by vessel-specific complementation of xylan biosynthesis mutants

M. Auer, H. Scheller, D. Loqué, 2012, Biotechnology for Biofuels.

N-terminal cysteines affect oligomer stability of the allosterically regulated ammonium transporter LeAMT1;1.

W. Frommer, N. von Wirén, D. Loqué, 2011, Journal of experimental botany.

Exploiting members of the BAHD acyltransferase family to synthesize multiple hydroxycinnamate and benzoate conjugates in yeast

J. Keasling, S. Deutsch, A. Mukhopadhyay, 2016, Microbial Cell Factories.

Biochemical characterization of Arabidopsis APYRASE family reveals their roles in regulating endomembrane NDP/NMP homoeostasis.

D. Loqué, T. Chiu, J. Heazlewood, 2015, The Biochemical journal.

Isolation and Proteomic Characterization of the Arabidopsis Golgi Defines Functional and Novel Components Involved in Plant Cell Wall Biosynthesis1[W][OA]

M. Auer, C. Petzold, A. Mukhopadhyay, 2012, Plant Physiology.

The Selaginella Genome Identifies Genetic Changes Associated with the Evolution of Vascular Plants

Jeremy D. DeBarry, Michael S. Barker, M. Gribskov, 2011, Science.

A Membrane Protein/Signaling Protein Interaction Network for Arabidopsis Version AMPv2

W. Frommer, S. Rhee, J. Schroeder, 2010, Front. Physio..

AtAPY1 and AtAPY2 function as Golgi-localized nucleoside diphosphatases in Arabidopsis thaliana.

D. Loqué, A. Orellana, T. Chiu, 2012, Plant & cell physiology.

Standards for Plant Synthetic Biology: a Common Syntax for Exchange of Dna 1 Parts 2 3

Jonathan D. G. Jones, J. Ajioka, N. Patron, 2015 .

Correction: Production of hydroxycinnamoyl anthranilates from glucose in Escherichia coli

J. Keasling, D. Juminaga, D. Loqué, 2014, Microbial Cell Factories.