T. Oroguchi

发表

Combination of coarse-grained molecular dynamics simulations and small-angle X-ray scattering experiments

M. Ikeguchi, Toru Ekimoto, Yuichi Kokabu, 2019, Biophysics and physicobiology.

Methods and application of coherent X-ray diffraction imaging of noncrystalline particles

T. Oroguchi, M. Nakasako, Amane Kobayashi, 2020, Biophysical Reviews.

Data processing software suite SITENNO for coherent X-ray diffraction imaging using the X-ray free-electron laser SACLA

T. Oroguchi, M. Nakasako, Y. Takayama, 2014, Journal of synchrotron radiation.

Energy landscape of domain motion in glutamate dehydrogenase deduced from cryo-electron microscopy.

T. Oroguchi, M. Nakasako, Takayuki Kato, 2020 .

Specimen preparation for cryogenic coherent X-ray diffraction imaging of biological cells and cellular organelles by using the X-ray free-electron laser at SACLA

T. Oroguchi, M. Nakasako, Amane Kobayashi, 2016, Journal of synchrotron radiation.

TAKASAGO-6 apparatus for cryogenic coherent X-ray diffraction imaging of biological non-crystalline particles using X-ray free electron laser at SACLA.

T. Oroguchi, M. Nakasako, Amane Kobayashi, 2016, The Review of scientific instruments.

Cryogenic coherent x-ray diffraction imaging for biological non-crystalline particles using the KOTOBUKI-1 diffraction apparatus at SACLA

K. Namba, T. Kameshima, K. Yonekura, 2015 .

Dark-field phase retrieval under the constraint of the Friedel symmetry in coherent X-ray diffraction imaging.

T. Oroguchi, M. Nakasako, Amane Kobayashi, 2014, Optics express.

Single-shot three-dimensional structure determination of nanocrystals with femtosecond X-ray free-electron laser pulses.

Masaki Yamamoto, Takashi Kameshima, Tetsuya Ishikawa, 2013, Nature communications.

A protocol for searching the most probable phase-retrieved maps in coherent X-ray diffraction imaging by exploiting the relationship between convergence of the retrieved phase and success of calculation.

T. Oroguchi, M. Nakasako, Amane Kobayashi, 2017, Journal of synchrotron radiation.

Common structural features of toxic intermediates from &agr;-synuclein and GroES fibrillogenesis detected using cryogenic coherent X-ray diffraction imaging

T. Oroguchi, M. Nakasako, Y. Kawata, 2017, Journal of biochemistry.

Classification and assessment of retrieved electron density maps in coherent X-ray diffraction imaging using multivariate analysis.

T. Oroguchi, M. Nakasako, Yukinari Sekiguchi, 2016, Journal of synchrotron radiation.

Coherent X-Ray Diffraction Imaging of Chloroplasts from Cyanidioschyzon merolae by Using X-Ray Free Electron Laser.

T. Oroguchi, M. Nakasako, S. Matsunaga, 2015, Plant & cell physiology.

Shot-by-shot characterization of focused X-ray free electron laser pulses

T. Oroguchi, M. Nakasako, Amane Kobayashi, 2018, Scientific Reports.

Atomically detailed description of the unfolding of alpha-lactalbumin by the combined use of experiments and simulations.

A. Kidera, M. Ikeguchi, K. Kuwajima, 2005, Journal of molecular biology.

Domain Organization in Plant Blue-Light Receptor Phototropin2 of Arabidopsis thaliana Studied by Small-Angle X-ray Scattering

T. Oroguchi, M. Nakasako, Y. Takayama, 2020, International journal of molecular sciences.

Light-induced Conformational Changes of LOV1 (Light Oxygen Voltage-sensing Domain 1) and LOV2 Relative to the Kinase Domain and Regulation of Kinase Activity in Chlamydomonas Phototropin*

T. Hikima, T. Oroguchi, M. Nakasako, 2013, The Journal of Biological Chemistry.

MD–SAXS method with nonspherical boundaries

M. Ikeguchi, T. Oroguchi, Tomotaka Oroguchi, 2012 .

Towards the Structural Characterization of Intrinsically Disordered Proteins by SAXS and MD Simulation

M. Ikeguchi, T. Oroguchi, Mamoru Sato, 2011 .

Structural and functional analysis of the intrinsic inhibitor subunit epsilon of F1-ATPase from photosynthetic organisms.

M. Ikeguchi, T. Oroguchi, T. Hisabori, 2009, The Biochemical journal.

Experimental and Simulation Studies of the Folding/Unfolding of Goat α-Lactalbumin

A. Kidera, M. Ikeguchi, K. Kuwajima, 2009 .

Influences of lone-pair electrons on directionality of hydrogen bonds formed by hydrophilic amino acid side chains in molecular dynamics simulation

T. Oroguchi, M. Nakasako, 2017, Scientific Reports.