B. Corry

发表

An improved open-channel structure of MscL determined from FRET confocal microscopy and simulation

Boris Martinac, Ben Corry, Prithwish Pal, 2010, The Journal of general physiology.

A computational assessment of the permeability and salt rejection of carbon nanotube membranes and their application to water desalination

B. Corry, Michael Thomas, 2016, Philosophical Transactions of the Royal Society A: Mathematical, Physical and Engineering Sciences.

Comparing the Ability of Enhanced Sampling Molecular Dynamics Methods To Reproduce the Behavior of Fluorescent Labels on Proteins.

B. Corry, Katarzyna Walczewska-Szewc, E. Deplazes, 2015, Journal of chemical theory and computation.

Tests of continuum theories as models of ion channels. I. Poisson-Boltzmann theory versus Brownian dynamics.

S. Chung, B. Corry, S. Kuyucak, 2000, Biophysical journal.

Mechanism of the dehydrogenase reaction of DmpFG and analysis of inter-subunit channeling efficiency and thermodynamic parameters in the overall reaction.

B. Corry, K. Stubbs, G. Flematti, 2013, The international journal of biochemistry & cell biology.

Long Timescale Molecular Simulations for Understanding Ion Channel Function

B. Corry, 2015 .

Voltage-Gated Sodium Channel Pharmacology: Insights From Molecular Dynamics Simulations.

B. Corry, Amanda Buyan, Rong Chen, 2017, Advances in pharmacology.

Conduction properties of KcsA measured using brownian dynamics with flexible carbonyl groups in the selectivity filter.

Shin-Ho Chung, B. Corry, 2007, Biophysical journal.

Mechanisms of permeation and selectivity in calcium channels.

S. Chung, T. Allen, B. Corry, 2001, Biophysical journal.

Computational study of the transmembrane domain of the acetylcholine receptor

B. Corry, Chen Song, 2009, European Biophysics Journal.

Understanding ion channel selectivity and gating and their role in cellular signalling.

Ben Corry, B. Corry, 2006, Molecular bioSystems.

The importance of dehydration in determining ion transport in narrow pores.

Ben Corry, B. Richards, A. Schäfer, 2012, Small.

Structure and Physiological Role of Ion Channels Studied by Fluorescence Spectroscopy

B. Corry, B. Martinac, C. Cranfield, 2013 .

Identification of novel inhibitors of the amino acid transporter B0AT1 (SLC6A19), a potential target to induce protein restriction and to treat type 2 diabetes

A. Bröer, S. Bröer, B. Corry, 2017, British journal of pharmacology.

Mechanistic basis for multidrug resistance and collateral drug sensitivity conferred to the malaria parasite by polymorphisms in PfMDR1 and PfCRT

Rowena E. Martin, B. Corry, S. Shafik, 2022, PLoS biology.

Molecular dynamics simulation of the partitioning of benzocaine and phenytoin into a lipid bilayer.

Lewis J. Martin, B. Corry, Rebecca R. Chao, 2014, Biophysical chemistry.

The role of thermodynamics and kinetics in ligand binding to G-quadruplex DNA.

B. Corry, N. Smith, 2012, Chemical communications.

Computational methods and theory for ion channel research

F. Cecconi, L. Chiodo, B. Roux, 2022, Advances in physics: X.

Physical basis of specificity and delayed binding of a subtype selective sodium channel inhibitor

B. Corry, 2018, Scientific Reports.

Pharmacological insights and quirks of bacterial sodium channels.

B. Corry, C. Ahern, Sora Lee, 2014, Handbook of experimental pharmacology.

Three computational methods for studying permeation, selectivity and dynamics in biological ion channels.

Shin-Ho Chung, B. Corry, 2005, Soft matter.

Multi-ion versus single-ion conduction mechanisms can yield current rectification in biological ion channels

Shin-Ho Chung, T. Hilder, B. Corry, 2014, Journal of biological physics.

TLR7 gain-of-function genetic variation causes human lupus

T. Andrews, J. Lupski, V. Pascual, 2022, Nature.

Cigarette smoke – induced reduction of C 1 q promotes emphysema

David, Madison, C. Coarfa, 2019 .

Simulations of guest transport in clathrates of Dianin's compound and hydroquinone.

B. Corry, M. Spackman, A. Nemkevich, 2013, Chemistry.

Characterizing the lipid fingerprint of the mechanosensitive channel Piezo2

B. Corry, Amanda Buyan, Yiechang Lin, 2022, The Journal of general physiology.

Binding of azobenzene and p-diaminoazobenzene to the human voltage-gated sodium channel Nav1.4.

B. Corry, S. Faraji, J. Nogueira, 2020, Physical chemistry chemical physics : PCCP.

Mechanism of concerted hydrogen bond reorientation in clathrates of Dianin's compound and hydroquinone.

B. Corry, M. Spackman, A. Nemkevich, 2011, Journal of the American Chemical Society.

Na + / Ca 2+ selectivity in the bacterial voltage-gated sodium channel

B. Corry, 2013 .

Testing the Applicability of Nernst-Planck Theory in Ion Channels: Comparisons with Brownian Dynamics Simulations

B. Corry, Chen Song, 2011, PloS one.

Enhancing the efficacy of cation-independent mannose 6-phosphate receptor inhibitors by intracellular delivery.

M. Fear, F. Wood, B. Corry, 2016, Chemical communications.

A G358S mutation in the Plasmodium falciparum Na+ pump PfATP4 confers clinically-relevant resistance to cipargamin

K. Kirk, Adele M. Lehane, G. V. van Dooren, 2022, Nature Communications.

A flexible approach to the calculation of resonance energy transfer efficiency between multiple donors and acceptors in complex geometries.

B. Corry, P. Rigby, D. Jayatilaka, 2005, Biophysical journal.

Solvent Transport Behavior of Shear Aligned Graphene Oxide Membranes and Implications in Organic Solvent Nanofiltration.

D. Bhattacharyya, E. Shamsaei, B. Corry, 2018, ACS applied materials & interfaces.

The confined space inside carbon nanotubes can dictate the stereo- and regioselectivity of Diels-Alder reactions.

K. Iyer, B. Corry, N. Smith, 2014, Physical chemistry chemical physics : PCCP.

Molecular dynamics simulations of structure and dynamics of organic molecular crystals.

B. Corry, M. Spackman, H. Bürgi, 2010, Physical chemistry chemical physics : PCCP.

Experimental energy barriers to anions transporting through nanofiltration membranes.

Ben Corry, B. Richards, A. Schäfer, 2013, Environmental science & technology.

Computational studies of Piezo1 yield insights into key lipid–protein interactions, channel activation, and agonist binding

B. Corry, Amanda Buyan, Yiechang Lin, 2021, Biophysical Reviews.

Computational studies of Piezo1 yield insights into key lipid–protein interactions, channel activation, and agonist binding

B. Corry, Amanda Buyan, Yiechang Lin, 2021, Biophysical Reviews.

Redox control of calcium channels: from mechanisms to therapeutic opportunities.

B. Corry, L. Hool, 2007, Antioxidants & redox signaling.

Dynamics of fluorescent dyes attached to G-quadruplex DNA and their effect on FRET experiments.

V. Birkedal, B. Corry, B. Schiøtt, 2015, Chemphyschem : a European journal of chemical physics and physical chemistry.

Dielectric self-energy in Poisson-Boltzmann and Poisson-Nernst-Planck models of ion channels.

Shin-Ho Chung, B. Corry, S. Kuyucak, 2003, Biophysical journal.

The predominant role of coordination number in potassium channel selectivity.

B. Corry, Michael Thomas, D. Jayatilaka, 2007, Biophysical journal.

Mechanism of ion permeation and selectivity in a voltage gated sodium channel.

Ben Corry, Michael Thomas, B. Corry, 2012, Journal of the American Chemical Society.

Piezo1 Forms Specific, Functionally Important Interactions with Phosphoinositides and Cholesterol.

S. Marrink, B. Corry, B. Martinac, 2020, Biophysical journal.

Piezo1 Induces Local Curvature in a Mammalian Membrane and Forms Specific Protein-Lipid Interactions

S. Marrink, M. Hodson, B. Corry, 2019, bioRxiv.

Designing carbon nanotube membranes for efficient water desalination.

Ben Corry, B. Corry, 2008, The journal of physical chemistry. B.

What have we learnt about the mechanisms of rapid water transport, ion rejection and selectivity in nanopores from molecular simulation?

Ben Corry, Michael Thomas, T. Hilder, 2014, Small.

Bioinspired graphene nanopores with voltage-tunable ion selectivity for Na(+) and K(+).

B. Corry, Jian Zhou, Zhongjin He, 2013, ACS nano.

Fluorescent Triphenyl Substituted Maleimide Derivatives: Synthesis, Spectroscopy and Quantum Chemical Calculations

B. Corry, S. Stewart, Hui Xie, 2010, Journal of Fluorescence.

Mapping the importance of four factors in creating monovalent ion selectivity in biological molecules.

B. Corry, Michael Thomas, D. Jayatilaka, 2011, Biophysical journal.

Ion conduction in ligand-gated ion channels: Brownian dynamics studies of four recent crystal structures.

B. Corry, Chen Song, 2010, Biophysical journal.

Tests of continuum theories as models of ion channels. II. Poisson-Nernst-Planck theory versus brownian dynamics.

Shin-Ho Chung, S. Chung, B. Corry, 2000, Biophysical journal.

A model of sodium channels.

Shin-Ho Chung, B. Corry, T. Vora, 2005, Biochimica et biophysica acta.

Understanding how redox modification of the channel protein alters channel structure and function is providing leads for the design of therapeutic interventions that target oxidative stress responses

B. Corry, L. Hool, 2007 .

7 Calcium Channels

B. Corry, L. Hool, 2006 .

Calcium Channels

B. Corry, L. Hool, Ben Corry, 2006 .

Structural Investigation of MscL Gating Using Experimental Data and Coarse Grained MD Simulations

Ben Corry, Siewert J. Marrink, Evelyne Deplazes, 2012, PLoS Comput. Biol..

Accounting for dye diffusion and orientation when relating FRET measurements to distances: three simple computational methods.

B. Corry, Katarzyna Walczewska-Szewc, 2014, Physical chemistry chemical physics : PCCP.

Locating the Route of Entry and Binding Sites of Benzocaine and Phenytoin in a Bacterial Voltage Gated Sodium Channel

Ben Corry, Lewis J. Martin, B. Corry, 2014, PLoS Comput. Biol..

ExiFRET: flexible tool for understanding FRET in complex geometries.

B. Corry, E. Deplazes, D. Jayatilaka, 2012, Journal of biomedical optics.

Ice-like Water Structure in Carbon Nanotube (8,8) Induces Cationic Hydration Enhancement

Ben Corry, Xiaohua Lu, B. Corry, 2013 .

FRET-Modulated Multihybrid Nanoparticles for Brightness-Equalized Single-Wavelength Barcoding.

Liang Huang, B. Corry, N. Hildebrandt, 2019, Journal of the American Chemical Society.

Thermostat choice significantly influences water flow rates in molecular dynamics studies of carbon nanotubes

B. Corry, Michael Thomas, 2015 .

In pursuit of a selective hepatocellular carcinoma therapeutic agent: Novel thalidomide derivatives with antiproliferative, antimigratory and STAT3 inhibitory properties.

B. Corry, Amanda Buyan, S. Stewart, 2021, European journal of medicinal chemistry.

Bacterial mechanosensitive channels: experiment and theory.

Boris Martinac, Ben Corry, B. Corry, 2008, Biochimica et biophysica acta.

A functional correlate of severity in alternating hemiplegia of childhood

K. M. McSweeney, D. Goldstein, S. Petrou, 2015, Neurobiology of Disease.

The role of MscL amphipathic N terminus indicates a blueprint for bilayer-mediated gating of mechanosensitive channels

D. Rees, P. Strop, B. Corry, 2016, Nature Communications.

Na+/Ca2+ selectivity in the bacterial voltage-gated sodium channel NavAb

Ben Corry, B. Corry, 2013, PeerJ.

Do bifunctional labels solve the problem of dye diffusion in FRET analysis?

B. Corry, Katarzyna Walczewska-Szewc, 2014, Physical chemistry chemical physics : PCCP.

Quantitative Förster resonance energy transfer efficiency measurements using simultaneous spectral unmixing of excitation and emission spectra

Ben Corry, Sanam Mustafa, John Hannagan, 2013, Journal of biomedical optics.

Determination of the orientational distribution and orientation factor for transfer between membrane-bound fluorophores using a confocal microscope.

Boris Martinac, Ben Corry, Dylan Jayatilaka, 2006, Biophysical journal.

An energy-efficient gating mechanism in the acetylcholine receptor channel suggested by molecular and Brownian dynamics.

B. Corry, 2006, Biophysical journal.

Conformational changes involved in MscL channel gating measured using FRET spectroscopy.

B. Corry, P. Rigby, B. Martinac, 2005, Biophysical journal.

Conduction mechanisms of chloride ions in ClC-type channels.

Shin-Ho Chung, B. Corry, M. O’Mara, 2004, Biophysical journal.

Reservoir boundaries in Brownian dynamics simulations of ion channels.

Shin-Ho Chung, T. Allen, B. Corry, 2002, Biophysical Journal.

Quantifying barriers to monovalent anion transport in narrow non-polar pores.

B. Richards, A. Schäfer, B. Corry, 2012, Physical chemistry chemical physics : PCCP.

New insights from modelling studies and molecular dynamics simulations of the DIS5‐S6 extracellular linker of the skeletal muscle sodium channel NaV1.4

Benjamin D. Kaehler, B. Corry, T. Neeman, 2023, Biopolymers.

Testing the use of molecular dynamics to simulate fluorophore motions and FRET.

B. Corry, E. Deplazes, D. Jayatilaka, 2011, Physical chemistry chemical physics : PCCP.

Simulation of structure, orientation, and energy transfer between AlexaFluor molecules attached to MscL.

B. Corry, D. Jayatilaka, 2008, Biophysical journal.

Invalidity of continuum theories of electrolytes in nanopores

Serdar Kuyucak, Ben Corry, Shin-Ho Chung, 2000 .

Designing a biomimetic graphene nanopore with valence selectivity between cations

B. Corry, Zhongjin He, 2023, Desalination.

Modifying Water Flow, Ion Selectivity, and Salt Rejection in Carbon Nanotubes via Surface Adsorption

B. Corry, Michael Thomas, 2020 .

Mutant bacterial sodium channels as models for local anesthetic block of eukaryotic proteins

B. Corry, Natalie E. Smith, 2016, Channels.

Investigating the size and dynamics of voltage-gated sodium channel fenestrations

B. Corry, J. Kaczmarski, 2014, Channels.

Response to comment on "experimental energy barriers to anions transporting through nanofiltration membranes".

B. Richards, A. Schäfer, B. Corry, 2013, Environmental Science and Technology.

How does overcoordination create ion selectivity?

B. Corry, Michael Thomas, D. Jayatilaka, 2013, Biophysical chemistry.

An Entropic Mechanism of Generating Selective Ion Binding in Macromolecules

Ben Corry, Dylan Jayatilaka, Michael Thomas, 2013, PLoS Comput. Biol..

Intrinsic ion selectivity of narrow hydrophobic pores.

Ben Corry, Chen Song, B. Corry, 2009, The journal of physical chemistry. B.

Mechanisms of selective ion transport and salt rejection in carbon nanostructures

B. Corry, 2017 .

A mechanical nanogate based on a carbon nanotube for reversible control of ion conduction.

B. Corry, Jian Zhou, Zhongjin He, 2014, Nanoscale.

Mechanisms of valence selectivity in biological ion channels

Shin-Ho Chung, B. Corry, 2006, Cellular and Molecular Life Sciences CMLS.

Computational study of methyl group dynamics in the hydroquinone clathrate of acetonitrile.

B. Corry, M. Spackman, A. Nemkevich, 2012, Physical chemistry chemical physics : PCCP.

Water and ion transport through functionalised carbon nanotubes: implications for desalination technology

Ben Corry, B. Corry, 2011 .

Modeling Selective Transport and Desalination in Nanotubes

Shin-Ho Chung, T. Hilder, B. Corry, 2015 .

Determination of the kinetic profile of a dinuclear platinum anticancer complex in the presence of sulfate: introducing a new tool for the expedited analysis of 2D [(1)H,( 15)N] HSQC NMR spectra.

N. Farrell, B. Corry, S. Berners‐Price, 2010, Inorganic chemistry.

Role of acetylcholine receptor domains in ion selectivity.

B. Corry, Chen Song, 2009, Biochimica et biophysica acta.

Electrostatic basis of valence selectivity in cationic channels.

Shin-Ho Chung, B. Corry, T. Vora, 2005, Biochimica et biophysica acta.

Permeation dynamics of chloride ions in the ClC-0 and ClC-1 channels

Shin-Ho Chung, B. Corry, M. O’Mara, 2004 .

Temperature dependence of rotational disorder in a non-standard amino acid from X-ray crystallography and molecular dynamics simulation.

B. Corry, J. Warren, W. Morgenroth, 2009, Physical chemistry chemical physics : PCCP.

Thermostat choice significantly influences water flow rates in molecular dynamics studies of carbon nanotubes

B. Corry, Michael Thomas, 2014, Microfluidics and Nanofluidics.

Continuum electrostatics fails to describe ion permeation in the gramicidin channel.

Shin-Ho Chung, B. Corry, S. Kuyucak, 2002, Biophysical journal.

Anomalous decline of water transport in covalently modified carbon nanotube membranes.

B. Corry, M. Majumder, 2011, Chemical communications.

A microfluidic platform to synthesize a G-quadruplex binding ligand.

B. Corry, N. Smith, M. Norret, 2009, Lab on a chip.

Identification of novel inhibitors of the amino acid transporter B0 AT1 (SLC6A19), a potential target to induce protein restriction and to treat type 2 diabetes.

S. Bröer, B. Corry, D. Schmoll, 2017, British journal of pharmacology.

Brownian dynamics study of flux ratios in sodium channels

Shin-Ho Chung, B. Corry, T. Vora, 2008, European Biophysics Journal.

Enhancing the efficacy of cation-independent mannose 6-phosphate receptor inhibitors by intracellular delivery.

M. Fear, F. Wood, B. Corry, 2016, Chemical communications.

Initiating Coarse-Grained MD Simulations for Membrane-Bound Proteins.

B. Corry, Amanda Buyan, 2021, Methods in molecular biology.

Determination of the kinetic profile of a dinuclear platinum anticancer complex in the presence of sulfate: introducing a new tool for the expedited analysis of 2D [(1)H,( 15)N] HSQC NMR spectra.

N. Farrell, B. Corry, S. Berners‐Price, 2010, Inorganic chemistry.

Experimental energy barriers to anions transporting through nanofiltration membranes.

B. Richards, A. Schäfer, B. Corry, 2013, Environmental science & technology.

Bioinspired graphene nanopores with voltage-tunable ion selectivity for Na(+) and K(+).

B. Corry, Jian Zhou, Zhongjin He, 2013, ACS nano.

Computational Studies of the Bacterial Mechanosensitive Channels

B. Corry, B. Martinac, 2008 .

Brownian dynamics investigation into the conductance state of the MscS channel crystal structure.

Shin-Ho Chung, B. Corry, T. Vora, 2006, Biochimica et biophysica acta.

Molecular dynamics simulations of structure and dynamics of organic molecular crystals.

B. Corry, M. Spackman, H. Bürgi, 2010, Physical chemistry chemical physics : PCCP.

Three computational methods for studying permeation, selectivity and dynamics in biological ion channels.

Shin-Ho Chung, B. Corry, 2005, Soft matter.

Influence of protein flexibility on the electrostatic energy landscape in gramicidin A

Shin-Ho Chung, B. Corry, 2005, European Biophysics Journal.

Comparing the Ability of Enhanced Sampling Molecular Dynamics Methods To Reproduce the Behavior of Fluorescent Labels on Proteins.

B. Corry, Katarzyna Walczewska-Szewc, E. Deplazes, 2015, Journal of chemical theory and computation.

Protonation state of inhibitors determines interaction sites within voltage-gated sodium channels

Delin Sun, Ben Corry, Amanda Buyan, 2018, Proceedings of the National Academy of Sciences.

Multi-ion versus single-ion conduction mechanisms can yield current rectification in biological ion channels

Shin-Ho Chung, T. Hilder, B. Corry, 2014, Journal of Biological Physics.

MyoD-family inhibitor proteins act as auxiliary subunits of Piezo channels

G. Secker, R. Harvey, H. Scott, 2023, Science.