Raquel Dias

发表

Different combinations of atomic interactions predict protein‐small molecule and protein‐DNA/RNA affinities with similar accuracy

Raquel Dias, Bryan Kolazckowski, Raquel Dias, 2015, Proteins.

Genome Sequence of Candidatus Nitrososphaera evergladensis from Group I.1b Enriched from Everglades Soil Reveals Novel Genomic Features of the Ammonia-Oxidizing Archaea

Jennifer C. Drew, W. Farmerie, S. Daroub, 2014, PloS one.

Identification of the Genes Required for the Culture of Liberibacter crescens, the Closest Cultured Relative of the Liberibacter Plant Pathogens

Austin G. Davis-Richardson, Raquel Dias, E. Triplett, 2016, Front. Microbiol..

Convergence of Domain Architecture, Structure, and Ligand Affinity in Animal and Plant RNA-Binding Proteins

Bryan D. Kolaczkowski, B. Kolaczkowski, Raquel Dias, 2017, Molecular biology and evolution.

Integrating DNA Methylation and Gene Expression Data in the Development of the Soybean-Bradyrhizobium N2-Fixing Symbiosis

Austin G. Davis-Richardson, Jennifer C. Drew, Bryan D. Kolaczkowski, 2016, Front. Microbiol..

A roadmap for the functional annotation of protein families: a community perspective

Benjamin M. Gyori, Lucy J. Colwell, Ian K. Blaby, 2022, Database J. Biol. Databases Curation.

Genomic Targets and Features of BarA-UvrY (-SirA) Signal Transduction Systems

Bryan D. Kolaczkowski, B. Kolaczkowski, B. Ahmer, 2015, PloS one.

Soil pH Determines Microbial Diversity and Composition in the Park Grass Experiment

Austin G. Davis-Richardson, Raquel Dias, P. Hirsch, 2015, Microbial Ecology.

A Step-by-Step Guide to Using BioNetFit.

Richard G Posner, William S Hlavacek, Jennifer A Csicsery-Ronay, 2018, Methods in molecular biology.

Soil pH Determines Microbial Diversity and Composition in the Park Grass Experiment

Austin G. Davis-Richardson, Raquel Dias, P. Hirsch, 2014, Microbial Ecology.

Improving the accuracy of high-throughput protein-protein affinity prediction may require better training data

Bryan D. Kolaczkowski, Raquel Dias, 2017, BMC Bioinformatics.

Bacteroides dorei dominates gut microbiome prior to autoimmunity in Finnish children at high risk for type 1 diabetes

Olli Simell, Bryan Kolaczkowski, Jorma Toppari, 2014, Front. Microbiol..

Lablab Purpureus Influences Soil Fertility and Microbial Diversity in a Tropical Maize-Based No-Tillage System

Raquel Dias, C. Bayer, R. Fulthorpe, 2019, Soil Systems.

Remarkably Complex Microbial Community Composition in Bromeliad Tank Waters Revealed by eDNA Metabarcoding

E. Eizirik, Raquel Dias, E. Triplett, 2020, The Journal of eukaryotic microbiology.

Microbial community composition in Brazilian stored diesel fuel of varying sulfur content, using high-throughput sequencing

M. Ferrão, Raquel Dias, E. Triplett, 2017 .

Corrigendum: Integrating DNA Methylation and Gene Expression Data in the Development of the Soybean-Bradyrhizobium N2-Fixing Symbiosis

Austin G. Davis-Richardson, Jennifer C. Drew, Bryan D. Kolaczkowski, 2016, Front. Microbiol..

Characterization of ciliate diversity in bromeliad tank waters from the Brazilian Atlantic Forest.

Austin G. Davis-Richardson, E. Eizirik, Raquel Dias, 2017, European journal of protistology.

Using both qualitative and quantitative data in parameter identification for systems biology models

Eshan D. Mitra, R. Posner, Raquel Dias, 2018, Nature Communications.

Machine learning applications to improve flavor and nutritional content of horticultural crops through breeding and genetics.

L. F. V. Ferrão, M. Gore, C. Messina, 2023, Current opinion in biotechnology.

Improving the accuracy of high-throughput protein-protein affinity prediction may require better training data

Bryan Kolaczkowski, Raquel Dias, Bryan D. Kolaczkowski, 2017, BMC Bioinformatics.