D. Hebenstreit

发表

3 ′-5 ′ crosstalk contributes to transcriptional bursting

B. Finkenstädt, Massimo Cavallaro, Mark Walsh, 2019, Genome Biology.

Are gene loops the cause of transcriptional noise?

D. Hebenstreit, 2013, Trends in genetics : TIG.

Methods, Challenges and Potentials of Single Cell RNA-seq

D. Hebenstreit, 2012, Biology.

Analysis and simulation of gene expression profiles in pure and mixed cell populations

S. Teichmann, D. Hebenstreit, 2011, Physical biology.

RNA sequencing reveals two major classes of gene expression levels in metazoan cells

S. Teichmann, A. van Oudenaarden, D. Hebenstreit, 2011, Molecular systems biology.

Single-Cell RNA Sequencing Reveals T Helper Cells Synthesizing Steroids De Novo to Contribute to Immune Homeostasis

Sarah A. Teichmann, Berthold Göttgens, Aleksandra A. Kolodziejczyk, 2014, Cell reports.

Modeling Enzyme Processivity Reveals that RNA-Seq Libraries Are Biased in Characteristic and Correctable Ways

V. Shahrezaei, Mark Walsh, D. Hebenstreit, 2016, Cell systems.

Timing Polymerase Pausing with TV-PRO-seq

Massimo Cavallaro, D. Hebenstreit, Jie Zhang, 2018, bioRxiv.

Imprecision and DNA Break Repair Biased towards Incompatible End Joining in Leukemia

R. Greil, S. Rebhandl, R. Geisberger, 2017, Molecular Cancer Research.

AKR1C3-Mediated Adipose Androgen Generation Drives Lipotoxicity in Women With Polycystic Ovary Syndrome

J. W. Allwood, W. Dunn, Mark Walsh, 2017, The Journal of clinical endocrinology and metabolism.

AKR 1 C 3-Mediated Adipose Androgen Generation Drives Lipotoxicity in Women With Polycystic Ovary Syndrome

J. W. Allwood, Mark Walsh, D. Hebenstreit, 2017 .

Experience Recruits MSK1 to Expand the Dynamic Range of Synapses and Enhance Cognition

B. Frenguelli, J. Arthur, D. Hebenstreit, 2020, The Journal of Neuroscience.

Polymerase recycling contributes to transcriptional noise

B. Finkenstädt, Massimo Cavallaro, Mark Walsh, 2019 .

Molecular and Immunological Characterization of Profilin from Mugwort Pollen

P. Briza, R. Ree, D. Hebenstreit, 2002, Biological chemistry.

STAT 6-Binding Motifs Located Upstream of FunctionalExpression in A 549 Cells by Three Gene SOCS-1 IL-4 and IL-13 Induce

A. Frischauf, D. Hebenstreit, F. Aberger, 2003 .

SOCS-1 and SOCS-3 inhibit IL-4 and IL-13 induced activation of Eotaxin-3/CCL26 gene expression in HEK293 cells.

D. Hebenstreit, A. Duschl, J. Horejs-Hoeck, 2005, Molecular immunology.

IL‐4 induces expression of TARC/CCL17 via two STAT6 binding sites

D. Hebenstreit, Gerald Wirnsberger, Gernot Posselt, 2006, European journal of immunology.

CMTr cap-adjacent 2′-O-ribose mRNA methyltransferases are required for reward learning and mRNA localization to synapses

D. Hebenstreit, Yanying Wu, R. Fray, 2022, Nature communications.

Synergising single-cell resolution and 4sU labelling boosts inference of transcriptional bursting

D. Hebenstreit, David M Edwards, Philip Davies, 2022, bioRxiv.

Ceg1 depletion reveals mechanisms governing degradation of non-capped RNAs

D. Hebenstreit, Pawel Grzechnik, Onofrio Zanin, 2022, bioRxiv.

Signaling mechanisms, interaction partners, and target genes of STAT6.

D. Hebenstreit, Gerald Wirnsberger, A. Duschl, 2006, Cytokine & growth factor reviews.

Identification of a distal tandem STAT6 element within the CCL17 locus.

D. Hebenstreit, Gerald Wirnsberger, A. Duschl, 2007, Human immunology.

CRISIS IN CALIFORNIA: REFORMING WORKERS' COMPENSATION

D. Hebenstreit, Liaoliao Li, A. Archie, 2004 .

University of Birmingham AKR1C3-mediated adipose androgen generation drives lipotoxicity in women with polycystic ovary syndrome

J. W. Allwood, Reilly, W. Dunn, 2017 .

IL-4 and IL-13 Induce SOCS-1 Gene Expression in A549 Cells by Three Functional STAT6-Binding Motifs Located Upstream of the Transcription Initiation Site

A. Frischauf, D. Hebenstreit, F. Aberger, 2003 .

Ceg1 depletion reveals mechanisms governing degradation of non-capped RNAs

D. Hebenstreit, Pawel Grzechnik, Onofrio Zanin, 2022, bioRxiv.

The RNA helicase UPF1 associates with mRNAs co-transcriptionally and is required for the release of mRNAs from transcription sites

D. Hebenstreit, L. Orsini, S. Brogna, 2018, bioRxiv.

3 ′-5 ′ crosstalk contributes to transcriptional bursting

B. Finkenstädt, Massimo Cavallaro, Mark Walsh, 2021, Genome biology.

The RNA helicase UPF1 associates with mRNAs co-transcriptionally and is required for the release of mRNAs from gene loci

D. Hebenstreit, L. Orsini, S. Brogna, 2019, eLife.

AID induces intraclonal diversity and genomic damage in CD86+ chronic lymphocytic leukemia cells

R. Greil, S. Rebhandl, M. Huemer, 2014, European journal of immunology.

APOBEC3 signature mutations in chronic lymphocytic leukemia

R. Greil, S. Rebhandl, M. Huemer, 2014, Leukemia.

Non-coding RNAs associated with Prader–Willi syndrome regulate transcription of neurodevelopmental genes in human induced pluripotent stem cells

Matt Jones, D. Hebenstreit, P. García, 2021, bioRxiv.

Anti-bias training for (sc)RNA-seq: experimental and computational approaches to improve precision

Daniel Hebenstreit, Philip Davies, Matt Jones, 2021, Briefings Bioinform..

Timing RNA polymerase pausing with TV-PRO-seq

J. Zhang, Massimo Cavallaro, D. Hebenstreit, 2021, Cell reports methods.

RPRD Proteins Control Transcription in Human Cells

R. Arnold, Matt Jones, D. Hebenstreit, 2021, bioRxiv.

Evidence of slightly increased Pol II pausing in UPF1-depleted Drosophila melanogaster cells

D. Hebenstreit, S. Brogna, A. Singh, 2020, microPublication biology.

Bayesian inference on stochastic gene transcription from flow cytometry data

Massimo Cavallaro, Bärbel Finkenstädt, Simone Tiberi, 2018, Bioinform..

The Regulatory T Cell Lineage Factor Foxp3 Regulates Gene Expression through Several Distinct Mechanisms Mostly Independent of Direct DNA Binding

Michael J. T. Stubbington, S. Teichmann, M. Stubbington, 2015, PLoS genetics.

Polycomb Associates Genome-wide with a Specific RNA Polymerase II Variant, and Regulates Metabolic Genes in ESCs

S. Q. Xie, Kelly J. Morris, J. Ragoussis, 2012, Cell stem cell.

Inhibition of Suppressive T Cell Factor 1 (TCF-1) Isoforms in Naive CD4+ T Cells Is Mediated by IL-4/STAT6 Signaling*

D. Hebenstreit, Gernot Posselt, A. Duschl, 2010, The Journal of Biological Chemistry.

CMTr cap-adjacent 2′-O-ribose mRNA methyltransferases are required for reward learning and mRNA localization to synapses

S. Waddell, D. Hebenstreit, Yanying Wu, 2021, bioRxiv.

LiBiNorm: an htseq-count analogue with improved normalisation of Smart-seq2 data and library preparation diagnostics

Nigel P. Dyer, Nigel P Dyer, Vahid Shahrezaei, 2019, PeerJ.

Duel of the fates: the role of transcriptional circuits and noise in CD4+ cells.

Sarah A Teichmann, M Madan Babu, Andrew Deonarine, 2012, Current opinion in cell biology.

EpiChIP: gene-by-gene quantification of epigenetic modification levels

Pietro Liò, Sarah A. Teichmann, Muxin Gu, 2010, Nucleic acids research.

IL-4 and IL-13 Induce SOCS-1 Gene Expression in A549 Cells by Three Functional STAT6-Binding Motifs Located Upstream of the Transcription Initiation Site 1

A. Frischauf, D. Hebenstreit, F. Aberger, 2003, The Journal of Immunology.

Genome-wide chromosomal association of Upf1 is linked to Pol II transcription in Schizosaccharomyces pombe

P. Baumann, F. Falciani, C. Azzalin, 2021, bioRxiv.

RNA editing contributes to epitranscriptome diversity in chronic lymphocytic leukemia

R. Greil, E. Campo, E. Levanon, 2020, Leukemia.

Nicotinamide Nucleotide Transhydrogenase as a Novel Treatment Target in Adrenocortical Carcinoma

W. Dunn, L. Metherell, Mark Walsh, 2018, Endocrinology.

JAK/STAT-dependent gene regulation by cytokines.

D. Hebenstreit, A. Duschl, J. Horejs-Hoeck, 2005, Drug news & perspectives.

Systemic and adipocyte transcriptional and metabolic dysregulation in idiopathic intracranial hypertension

C. Ludwig, Mark Walsh, D. Hebenstreit, 2021, JCI insight.

LEF-1 Negatively Controls Interleukin-4 Expression through a Proximal Promoter Regulatory Element*

M. Treiber, P. Krammer, M. Li‐Weber, 2008, Journal of Biological Chemistry.

Exome sequencing of the TCL1 mouse model for CLL reveals genetic heterogeneity and dynamics during disease development

R. Greil, R. Geisberger, D. Hebenstreit, 2018, Leukemia.

Forecasting Electric Vehicle Charging Station Occupancy: Smarter Mobility Data Challenge

Y. Goude, D. Hebenstreit, Sébastien Treguer, 2023, ArXiv.

RNA sequencing reveals two major classes of gene expression levels in metazoan cells

A. Oudenaarden, S. Teichmann, D. Hebenstreit, 2011 .

Bayesian inference of polymerase dynamics over the exclusion process

Ritabrata Dutta, Massimo Cavallaro, D. Hebenstreit, 2021, Royal Society Open Science.

Exome sequencing of the TCL1 mouse model for CLL reveals genetic heterogeneity and dynamics during disease development

R. Greil, R. Geisberger, D. Hebenstreit, 2018, Leukemia.

AID induces intraclonal diversity and genomic damage in CD86+ chronic lymphocytic leukemia cells

R. Greil, M. Huemer, R. Geisberger, 2014 .

Nicotinamide Nucleotide Transhydrogenase as a novel treatment 1 target in adrenocortical carcinoma 2 3

L. Metherell, Mark Walsh, D. Hebenstreit, 2019 .

Molecular Systems Biology Peer Review Process File Rna Sequencing Reveals Two Major Classes of Gene Expression Levels in Metazoan Cells Transaction Report

S. Teichmann, D. Hebenstreit, Varodom Charoensawan, 2022 .

Analysis and simulation of gene expression profiles in pure and mixed cell populations

S. Teichmann, D. Hebenstreit, 2011, Physical Biology.

3 ′-5 ′ crosstalk contributes to transcriptional bursting

B. Finkenstädt, Massimo Cavallaro, Mark Walsh, 2019, Genome Biology.

Faculty Opinions recommendation of Differential expression analysis for sequence count data.

S. Teichmann, D. Hebenstreit, 2010 .