M. Komorowski

发表

Channel Capacity Computations for Unregulated and Autoregulated Gene Expression

Abhyudai Singh, Zahra Vahdat, Karol Nienałtowski, 2019 .

Translational repression contributes greater noise to gene expression than transcriptional repression.

Jacek Miekisz, Michał Komorowski, Andrzej M Kierzek, 2009, Biophysical journal.

Using a single fluorescent reporter gene to infer half-life of extrinsic noise and other parameters of gene expression.

Bärbel Finkenstädt, Michał Komorowski, D. Rand, 2010, Biophysical journal.

Analog nitrogen sensing in Escherichia coli enables high fidelity information processing

M. Stumpf, J. Pinney, M. Bennett, 2015, bioRxiv.

The Limited Information Capacity of Cross-Reactive Sensors Drives the Evolutionary Expansion of Signaling.

Dan S. Tawfik, Dan S Tawfik, Michał Komorowski, 2019, Cell systems.

Robustness and Information Transfer within IL-6-induced JAK/STAT Signalling

F. Schaper, Anna Dittrich, M. Komorowski, 2019, Communications Biology.

Functional redundancy in the NF-\kappa B signalling pathway

Tomasz Lipniacki, Michal Komorowski, Michal Wlodarczyk, 2013, 1303.3109.

Sensitivity, robustness, and identifiability in stochastic chemical kinetics models

Michael P H Stumpf, Michał Komorowski, David A Rand, 2011, Proceedings of the National Academy of Sciences.

Fractional response analysis reveals logarithmic cytokine responses in cellular populations

Karol Nienałtowski, M. Komorowski, J. Rehwinkel, 2020, Nature Communications.

StochSens - matlab package for sensitivity analysis of stochastic chemical systems

Michael P. H. Stumpf, Justina Zurauskiene, Michal Komorowski, 2012, Bioinform..

Molecular Analysis of the ABCA4 Gene Mutations in Patients with Stargardt Disease Using Human Hair Follicles

M. Komorowski, A. Podgórska, J. Malejczyk, 2020, International journal of molecular sciences.

NK Cells as Potential Targets for Immunotherapy in Endometriosis

M. Komorowski, J. Malejczyk, A. Ścieżyńska, 2019, Journal of clinical medicine.

Mathematical modeling reveals the functional implications of the different nuclear shuttling rates of Erk1 and Erk2

Heather A. Harrington, M. Stumpf, G. Ratto, 2012, Physical biology.

Dependence of MAPK mediated signaling on Erk isoforms and differences in nuclear shuttling

Heather A. Harrington, M. Stumpf, G. Ratto, 2011, 1110.3742.

Making sense of BMP signaling complexity.

M. Komorowski, 2022, Cell systems.

Milton's Natural Law: Divorce and Individual Property

M. Komorowski, 2012, Milton Studies.

“On the New Forcers of Conscience” and Milton’s Erastianism

M. Komorowski, 2014, Milton Studies.

Public Verse and Property: Marvell's "Horatian Ode" and the Ownership of Politics

M. Komorowski, 2012 .

Clustering reveals limits of parameter identifiability in multi-parameter models of biochemical dynamics

Tomasz Lipniacki, Michal Komorowski, Michal Wlodarczyk, 2015, BMC Systems Biology.

ToFFi - Toolbox for Frequency-based Fingerprinting of Brain Signals pdf

Wlodzislaw Duch, Joanna Dreszer, Tomasz Piotrowski, 2021, Neurocomputing.

Maximizing the Information Content of Experiments in Systems Biology

Michael P. H. Stumpf, Sarah Filippi, Juliane Liepe, 2013, PLoS Comput. Biol..

Bayesian inference of biochemical kinetic parameters using the linear noise approximation

David A. Rand, Michal Komorowski, Claire V. Harper, 2009, BMC Bioinformatics.

Reconstruction of transcriptional dynamics from gene reporter data using differential equations

Andrew J. Millar, Sanyi Tang, David A. Rand, 2008, Bioinform..

Supplementary information for Reconstruction of transcriptional dynamics from gene reporter data using dierential equations.

Julian R. E. Davis, Claire V. Harper, E. Heron, 2006 .

Isolation and culture of human primary keratinocytes—a methods review

M. Sikorska, M. Komorowski, J. Malejczyk, 2018, Experimental dermatology.

Nitrogen and Carbon Status Are Integrated at the Transcriptional Level by the Nitrogen Regulator NtrC In Vivo

Mauricio Barahona, M. Stumpf, M. Bennett, 2013, mBio.

Information-theoretic analysis of multivariate single-cell signaling responses

Tomasz Jetka, Karol Nienałtowski, Michał Komorowski, 2018, PLoS Comput. Biol..

Phenotypic variability, not noise, accounts for most of the cell-to-cell heterogeneity in IFN-γ and oncostatin M signaling responses

Abhyudai Singh, G. Müller-Newen, Karol Nienałtowski, 2022, Science Signaling.

An information-theoretic framework for deciphering pleiotropic and noisy biochemical signaling

Michael P H Stumpf, Tomasz Jetka, Michał Komorowski, 2018, Nature Communications.

Information processing in unregulated and autoregulated gene expression

Zahra Vahdat, Abhyudai Singh, Karol Nienałtowski, 2020, 2020 European Control Conference (ECC).

Applying recurrence plots in analysis of computer programs

Michał Komorowski, M. Komorowski, 2014 .

Information-theoretic analyses of cellular strategies for achieving high signaling capacity—dynamics, cross-wiring, and heterogeneity of cellular states

M. Komorowski, P. Topolewski, 2021 .

Nuclear translocation of STAT3 and NF-κB are independent of each other but NF-κB supports expression and activation of STAT3.

G. Müller-Newen, M. Komorowski, H. Schmitz-Van de Leur, 2017, Cellular signalling.

The tyrosine phosphatase SHP2 increases robustness and information transfer within IL-6-induced JAK/STAT signalling

F. Schaper, Anna Dittrich, M. Komorowski, 2021, Cell communication and signaling : CCS.

The tyrosine phosphatase SHP2 increases robustness and information transfer within IL-6-induced JAK/STAT signalling

Steffen Waldherr, Michal Komorowski, Tomasz Jetka, 2019, Cell Communication and Signaling.

Quantifying intrinsic and extrinsic noise in gene transcription using the linear noise approximation: An application to single cell data

David A. Rand, Julian R. E. Davis, Barbel Finkenstadt, 2013, 1401.1640.

Robustness and Information Transfer within IL-6-induced JAK/STAT Signalling

F. Schaper, Anna Dittrich, M. Komorowski, 2019, Communications Biology.

The Role of a Natural Amphibian Skin-Based Peptide, Ranatensin, in Pancreatic Cancers Expressing Dopamine D2 Receptors

M. Komorowski, A. Laskowska, S. Benyhe, 2022, Cancers.

Decomposing noise in biochemical signaling systems highlights the role of protein degradation.

Michael P H Stumpf, Jacek Miękisz, Michał Komorowski, 2011, Biophysical journal.

Quantifying intrinsic and extrinsic noise in gene transcription using the linear noise approximation: An application to single cell data

Julian R. E. Davis, Claire V. Harper, D. Rand, 2013, 1401.1640.

Role of the ABCA4 Gene Expression in the Clearance of Toxic Vitamin A Derivatives in Human Hair Follicle Stem Cells and Keratinocytes

M. Komorowski, J. Malejczyk, A. Lutyńska, 2023, International journal of molecular sciences.

Random Binary Search Trees for Approximate Nearest Neighbour Search in Binary Space

Tomasz Trzcinski, Michal Komorowski, T. Trzciński, 2017, PReMI.

Quantitative Biology: Theory, Computational Methods, and Models

Terrence J. Sejnowski, Alan S. Perelson, Marco S. Nobile, 2018 .

A hierarchical model of transcriptional dynamics allows robust estimation of transcription rates in populations of single cells with variable gene copy number

David A. Rand, Dan J. Woodcock, Michal Komorowski, 2013, Bioinform..

Reconstruction of transcriptional dynamics from gene reporter data using differential equations

Julian R. E. Davis, Claire V. Harper, E. Heron, 2008, Bioinform..