Smita S. Patel

发表

Interaction of CheY with the C-Terminal Peptide of CheZ

Ann M Stock, J. Guhaniyogi, Ti Wu, 2007, Journal of bacteriology.

Yeast Pif1 Helicase Exhibits a One-base-pair Stepping Mechanism for Unwinding Duplex DNA*

K. Raney, Smita S. Patel, Ramanagouda Ramanagoudr-Bhojappa, 2013, The Journal of Biological Chemistry.

Coordinating DNA replication by means of priming loop and differential synthesis rate

T. Ha, Smita S. Patel, M. Pandey, 2009, Nature.

Kinetics of Transcription Initiation at lacP1

Siddhartha Roy, Siddhartha Roy, Smita S. Patel, 2003, Journal of Biological Chemistry.

Human but Not Yeast CHD1 Binds Directly and Selectively to Histone H3 Methylated at Lysine 4 via Its Tandem Chromodomains*

Danny Reinberg, Helena Santos-Rosa, Tony Kouzarides, 2005, Journal of Biological Chemistry.

A Survey on an Efficient Data Caching Mechanism for Big Data Application

Smita S. Patel, Shakil B. Tamboli, 2014 .

Real-time observation of the transition from transcription initiation to elongation of the RNA polymerase

Rahul Roy, Taekjip Ha, T. Ha, 2009, Proceedings of the National Academy of Sciences.

Single-Molecule Fluorescence Reveals the Unwinding Stepping Mechanism of Replicative Helicase

T. Ha, Smita S. Patel, M. Pandey, 2014, Cell reports.

DNA Helicases: Hexameric Enzyme Action

Smita S. Patel, D. Sen, 2013 .

One motor driving two translocases

Smita S. Patel, 2010, Nature Structural &Molecular Biology.

DNA Helicases: Hexameric Enzyme Action

Smita S. Patel, D. Sen, 2013 .

Helicase and polymerase move together close to the fork junction and copy DNA in one-nucleotide steps.

Smita S. Patel, M. Pandey, 2014, Cell reports.

Two mechanisms coordinate replication termination by the Escherichia coli Tus–Ter complex

S. Hamdan, S. Jergic, N. Dixon, 2015, Nucleic acids research.

Human Mitochondrial DNA Helicase TWINKLE Is Both an Unwinding and Annealing Helicase*

Smita S. Patel, D. Sen, G. Tang, 2012, The Journal of Biological Chemistry.

The intrinsically disordered CARDs‐Helicase linker in RIG‐I is a molecular gate for RNA proofreading

P. Griffin, Smita S. Patel, B. Pascal, 2022, The EMBO journal.

RIG-I uses its intrinsically disordered CARDs-Helicase linker in RNA proofreading functions

P. Griffin, Smita S. Patel, B. Pascal, 2021, bioRxiv.

Structural basis for m7G recognition and 2′-O-methyl discrimination in capped RNAs by the innate immune receptor RIG-I

F. Jiang, Smita S. Patel, J. Marcotrigiano, 2016, Proceedings of the National Academy of Sciences.

Insights into the Role of an Active Site Aspartate in Ty1 Reverse Transcriptase Polymerization*

Smita S. Patel, A. Gabriel, M. Pandey, 2004, Journal of Biological Chemistry.

Mitochondrial RNA capping: highly efficient 5’-RNA capping with NAD+ and NADH by yeast and human mitochondrial RNA polymerase

R. Ebright, D. Temiakov, Smita S. Patel, 2018, bioRxiv.

Highly efficient 5' capping of mitochondrial RNA with NAD+ and NADH by yeast and human mitochondrial RNA polymerase

R. Ebright, D. Wallace, D. Temiakov, 2018, eLife.

The Dynamic Landscape of Transcription Initiation in Yeast Mitochondria

Seung-won Lee, K. Das, Hajin Kim, 2019, bioRxiv.

HDX-MS reveals dysregulated checkpoints that compromise discrimination against self RNA during RIG-I mediated autoimmunity

Ruben D. Garcia-Ordonez, P. Griffin, Smita S. Patel, 2018, Nature Communications.

The autoinhibitory CARD2-Hel2i Interface of RIG-I governs RNA selection

F. Jiang, Smita S. Patel, J. Marcotrigiano, 2015, Nucleic acids research.

Dynamic coupling between the motors of DNA replication: hexameric helicase, DNA polymerase, and primase.

Smita S. Patel, M. Pandey, Divya Nandakumar, 2011, Current opinion in chemical biology.

Enzyme-catalyzed synthesis of citric acid using acetyl-coenzyme a recycling in a two-phase system

D. Walt, Smita S. Patel, Tianmei Ouyang, 1990 .

Excessive excision of correct nucleotides during DNA synthesis explained by replication hurdles

K. Raney, Smita S. Patel, M. Pandey, 2020, The EMBO journal.

Irreversible Binding Kinetics of Bacillus thuringiensis CryIA δ-Endotoxins to Gypsy Moth Brush Border Membrane Vesicles Is Directly Correlated to Toxicity (*)

Smita S. Patel, D. Dean, Yi-Chang Liang, 1995, The Journal of Biological Chemistry.

Translational Regulation by an Intramolecular Stem-Loop Is Required for Intermolecular RNA Regulation of the par Addiction Module

Smita S. Patel, K. Weaver, S. Shokeen, 2008, Journal of bacteriology.

SURVEY AND SUMMARY Mechanisms of a ring shaped helicase

Smita S. Patel, I. Donmez, 2006 .

Fluorescent Lifetime Trajectories of a Single Fluorophore Reveal Reaction Intermediates During Transcription Initiation

T. Ha, Smita S. Patel, Maria Sorokina, 2009, Journal of the American Chemical Society.

Yeast mtDNA transcription initiation in single nucleotide addition steps

K. Das, Smita S. Patel, Urmimala Basu, 2022, bioRxiv.

Acetyl coenzyme A synthetase catalyzed reactions of coenzyme A with α,β-unsaturated carboxylic acids

D. Walt, Smita S. Patel, 1988 .

T7 RNA polymerase-induced bending of promoter DNA is coupled to DNA opening.

Smita S. Patel, G. Tang, 2006, Biochemistry.

Mitochondrial Transcription Factor Mtf1 Traps the Unwound Non-template Strand to Facilitate Open Complex Formation*

Smita S. Patel, S. Paratkar, Swaroopa Paratkar, 2009, The Journal of Biological Chemistry.

The Yeast Mitochondrial RNA Polymerase and Transcription Factor Complex Catalyzes Efficient Priming of DNA Synthesis on Single-stranded DNA*

K. Raney, Smita S. Patel, A. Ramachandran, 2016, The Journal of Biological Chemistry.

Interactions of the yeast mitochondrial RNA polymerase with the +1 and +2 promoter bases dictate transcription initiation efficiency

Smita S. Patel, A. Deshpande, 2014, Nucleic acids research.

The Mechanism of ATP Hydrolysis at the Noncatalytic Sites of the Transcription Termination Factor Rho*

Smita S. Patel, Dong-Eun Kim, 1999, The Journal of Biological Chemistry.

Time-resolved analysis of transcription through chromatin.

Smita S. Patel, V. Studitsky, Han-Wen Chang, 2019, Methods.

Single-Molecule Studies Reveal Dynamics of DNA Unwinding by the Ring-Shaped T7 Helicase

Michelle D. Wang, Lu Bai, Smita S. Patel, 2007, Cell.

Biochemical Analysis of Mutant T7 Primase/Helicase Proteins Defective in DNA Binding, Nucleotide Hydrolysis, and the Coupling of Hydrolysis with DNA Unwinding*

F. Studier, A. H. Rosenberg, M. Washington, 1996, The Journal of Biological Chemistry.

Structure, mechanism, and regulation of mitochondrial DNA transcription initiation

K. Das, Smita S. Patel, Kristin E. Dittenhafer-Reed, 2020, The Journal of Biological Chemistry.

Phosphorylation of mitochondrial transcription factor B2 controls mitochondrial DNA binding and transcription.

Smita S. Patel, Kristin E. Dittenhafer-Reed, Urmimala Basu, 2020, Biochemical and biophysical research communications.

Cryo-EM structures reveal transcription initiation steps by yeast mitochondrial RNA polymerase

K. Das, C. Dharia, Smita S. Patel, 2020, bioRxiv.

The C-terminal tail of the yeast mitochondrial transcription factor Mtf1 coordinates template strand alignment, DNA scrunching and timely transition into elongation

Seung-won Lee, Hajin Kim, Smita S. Patel, 2020, Nucleic acids research.

Transcriptional fidelities of human mitochondrial POLRMT, yeast mitochondrial Rpo41, and phage T7 single-subunit RNA polymerases

Smita S. Patel, A. Ramachandran, Mihai Solotchi, 2017, The Journal of Biological Chemistry.

Mechanism of transcription initiation by the yeast mitochondrial RNA polymerase.

Smita S. Patel, A. Deshpande, 2012, Biochimica et biophysica acta.

Transient State Kinetics of Transcription Elongation by T7 RNA Polymerase*♦

Smita S Patel, Smita S. Patel, Vasanti Subramanian Anand, 2006, Journal of Biological Chemistry.

Human mitochondrial transcription factors TFAM and TFB2M work synergistically in promoter melting during transcription initiation

Smita S. Patel, A. Ramachandran, Divya Nandakumar, 2016, Nucleic acids research.

Correlating Transcription Initiation and Conformational Changes by a Single-Subunit RNA Polymerase with Near Base-Pair Resolution.

T. Ha, R. Roy, Smita S. Patel, 2018, Molecular cell.

Kinetic Pathway of Pyrophosphorolysis by a Retrotransposon Reverse Transcriptase

Smita S. Patel, A. Gabriel, M. Pandey, 2008, PloS one.

The energetics of consensus promoter opening by T7 RNA polymerase.

Smita S. Patel, R. P. Bandwar, 2002, Journal of molecular biology.

Fluorescence-based assay to measure the real-time kinetics of nucleotide incorporation during transcription elongation.

Smita S. Patel, G. Tang, V. Anand, 2011, Journal of molecular biology.

Participation of the Fingers Subdomain of Escherichia coli DNA Polymerase I in the Strand Displacement Synthesis of DNA*

Smita S. Patel, M. Modak, Aashish Srivastava, 2007, Journal of Biological Chemistry.

The Role of the C-terminal Domain of Protein Tyrosine Phosphatase-1B in Phosphatase Activity and Substrate Binding*

L. Wennogle, Smita S. Patel, J. Koehn, 2007, Journal of Biological Chemistry.

Structural basis of RNA recognition and activation by innate immune receptor RIG-I

M. Gale, F. Jiang, Smita S. Patel, 2011, Nature.

Helicase promotes replication re-initiation from an RNA transcript

Michelle D. Wang, Smita S. Patel, James T. Inman, 2018, Nature Communications.

T7 replisome directly overcomes DNA damage

Michelle D. Wang, M. Kashlev, Smita S. Patel, 2015, Nature Communications.

Mg2+ and a Key Lysine Modulate Exchange Activity of Eukaryotic Translation Elongation Factor 1Bα*

M. G. Jeppesen, T. Kinzy, Smita S. Patel, 2006, Journal of Biological Chemistry.

Mechanistic and Kinetic Analysis of the DcpS Scavenger Decapping Enzyme*

Smita S. Patel, M. Kiledjian, V. Rajagopal, 2008, Journal of Biological Chemistry.

Homologous DNA strand exchange activity of the human mitochondrial DNA helicase TWINKLE

Smita S. Patel, G. Patel, D. Sen, 2016, Nucleic acids research.

Cooperative base pair melting by helicase and polymerase positioned one nucleotide from each other

Smita S. Patel, M. Pandey, Divya Nandakumar, 2015, eLife.

Single strand binding proteins increase the processivity of DNA unwinding by the hepatitis C virus helicase.

Smita S. Patel, V. Rajagopal, 2008, Journal of molecular biology.

DNA synthesis provides the driving force to accelerate DNA unwinding by a helicase

Smita S. Patel, I. Donmez, Mikhail K. Levin, 2005, Nature.

Identification and characterization of a family of toxin-antitoxin systems related to the Enterococcus faecalis plasmid pAD1 par addiction module.

Smita S. Patel, J. Endres, K. Bayles, 2009, Microbiology.

Antisense RNA Regulation by Stable Complex Formation in the Enterococcus faecalis Plasmid pAD1 par Addiction System

Smita S. Patel, E. Ehli, K. Weaver, 2004, Journal of bacteriology.

The Helicase from Hepatitis C Virus Is Active as an Oligomer*

M. Levin, Smita S. Patel, S. Patel, 1999, The Journal of Biological Chemistry.

Viral Helicases

Smita S. Patel, V. Rajagopal, 2008, Viral Genome Replication.

Mechanisms of a ring shaped helicase

Smita S. Patel, I. Donmez, 2006, Nucleic acids research.

Mechanisms of Helicases*

Smita S. Patel, I. Donmez, 2006, Journal of Biological Chemistry.

A Brownian motor mechanism of translocation and strand separation by hepatitis C virus helicase

Smita S. Patel, Mikhail K. Levin, M. Gurjar, 2005, Nature Structural &Molecular Biology.

The Functional Interaction of the Hepatitis C Virus Helicase Molecules Is Responsible for Unwinding Processivity*

Smita S. Patel, Yuh-Hwa Wang, Mikhail K. Levin, 2004, Journal of Biological Chemistry.

The DNA-unwinding mechanism of the ring helicase of bacteriophage T7.

Smita S. Patel, Mikhail K. Levin, Yong-Joo Jeong, 2004, Proceedings of the National Academy of Sciences of the United States of America.

Helicase from Hepatitis C Virus, Energetics of DNA Binding*

Smita S. Patel, Mikhail K. Levin, 2002, The Journal of Biological Chemistry.

The Protease Domain Increases the Translocation Stepping Efficiency of the Hepatitis C Virus NS3-4A Helicase*

Smita S. Patel, V. Rajagopal, Mikhail K. Levin, 2010, The Journal of Biological Chemistry.

ATP Binding Modulates the Nucleic Acid Affinity of Hepatitis C Virus Helicase*

Smita S. Patel, Mikhail K. Levin, M. Gurjar, 2003, Journal of Biological Chemistry.

Bacteriophage T7 DNA Helicase Binds dTTP, Forms Hexamers, and Binds DNA in the Absence of Mg2+

Smita S. Patel, K. M. Picha, 1998, The Journal of Biological Chemistry.

Histone chaperone FACT action during transcription through chromatin by RNA polymerase II

D. Reinberg, K. Luger, Smita S. Patel, 2013, Proceedings of the National Academy of Sciences.

Helicases as Molecular Motors

Smita S. Patel, Mikhail K. Levin, 2004 .

T7 DNA helicase: a molecular motor that processively and unidirectionally translocates along single-stranded DNA.

Dong-Eun Kim, Smita S. Patel, M. Narayan, 2002, Journal of molecular biology.

Replication | DNA Helicases: Hexameric Enzyme Action

Smita S. Patel, Anupam Singh, 2021, Encyclopedia of Biological Chemistry III.

Relaxed Rotational and Scrunching Changes in P266L Mutant of T7 RNA Polymerase Reduce Short Abortive RNAs while Delaying Transition into Elongation

T. Ha, R. Roy, Smita S. Patel, 2014, PloS one.

Fluorescent methods to study transcription initiation and transition into elongation.

Smita S. Patel, A. Deshpande, Shemaila Sultana, 2014, Experientia supplementum.

Opening–closing dynamics of the mitochondrial transcription pre-initiation complex

T. Ha, Hajin Kim, Smita S. Patel, 2011, Nucleic acids research.

The N-terminal Domain of the Yeast Mitochondrial RNA Polymerase Regulates Multiple Steps of Transcription*

Smita S. Patel, G. Tang, S. Paratkar, 2011, The Journal of Biological Chemistry.

Transcription initiation in a single-subunit RNA polymerase proceeds through DNA scrunching and rotation of the N-terminal subdomains.

T. Ha, R. Roy, Smita S. Patel, 2008, Molecular cell.

Sequential release of promoter contacts during transcription initiation to elongation transition.

Smita S. Patel, R. P. Bandwar, G. Tang, 2006, Journal of molecular biology.

Rapid binding of T7 RNA polymerase is followed by simultaneous bending and opening of the promoter DNA.

Smita S. Patel, G. Tang, 2006, Biochemistry.

Extended Upstream A-T Sequence Increases T7 Promoter Strength*

Smita S. Patel, R. P. Bandwar, G. Tang, 2005, Journal of Biological Chemistry.

T7 Lysozyme Represses T7 RNA Polymerase Transcription by Destabilizing the Open Complex during Initiation*

Smita S Patel, Smita S. Patel, Natalie M Stano, 2004, Journal of Biological Chemistry.

The +2 NTP Binding Drives Open Complex Formation in T7 RNA Polymerase*

Smita S. Patel, Mikhail K. Levin, Natalie M. Stano, 2002, The Journal of Biological Chemistry.

Kinetic Mechanism of GTP Binding and RNA Synthesis during Transcription Initiation by Bacteriophage T7 RNA Polymerase*

Smita S. Patel, Y. Jia, S. Patel, 1997, The Journal of Biological Chemistry.

Equilibrium and Stopped-flow Kinetic Studies of Interaction between T7 RNA Polymerase and Its Promoters Measured by Protein and 2-Aminopurine Fluorescence Changes*

A Kumar, A. Kumar, Smita S. Patel, 1996, The Journal of Biological Chemistry.

Real-time dynamic single-molecule protein sequencing on an integrated semiconductor device

Matthew D. Dyer, Antoine M. van Oijen, J. Rothberg, 2022, bioRxiv.

RIG-I Uses an ATPase-Powered Translocation-Throttling Mechanism for Kinetic Proofreading of RNAs and Oligomerization.

Smita S. Patel, J. Marcotrigiano, Chen Wang, 2018, Molecular cell.

Branch migration enzyme as a Brownian ratchet

S. McKinney, T. Ha, Smita S. Patel, 2008, The EMBO journal.

Mechanochemistry of transcription termination factor Rho.

G. Oster, J. Liao, Dong-Eun Kim, 2006, Molecular cell.

Mechanochemistry of t7 DNA helicase.

G. Oster, J. Liao, Dong-Eun Kim, 2005, Journal of molecular biology.

Switching from single-stranded to double-stranded DNA limits the unwinding processivity of ring-shaped T7 DNA helicase

Smita S. Patel, V. Rajagopal, Yong-Joo Jeong, 2013, Nucleic acids research.

Loss of Chromosome 16 From Renal Epithelial Cells in Humans

J. Skurnick, A. Aviv, P. Wilson, 2002, Hypertension.

Direct measurements of torque during Holliday junction migration.

Michelle D. Wang, Smita S. Patel, Scott Forth, 2011, Biophysical journal.

Survival advantage of cultured human vascular endothelial cells that lost chromosome 13

A. Aviv, Smita S. Patel, M. Kimura, 2004, Chromosoma.

DNA looping mediates nucleosome transfer

Robert A. Forties, Michelle D. Wang, Smita S. Patel, 2016, Nature Communications.

Increased DNA Unwinding Efficiency of Bacteriophage T7 DNA Helicase Mutant Protein 4A′/E348K*

M. Washington, Smita S. Patel, 1998, The Journal of Biological Chemistry.

DNA is bound within the central hole to one or two of the six subunits of the T7 DNA helicase

E. Egelman, Xiong Yu, M. Hingorani, 1996, Nature Structural Biology.

The Kinetic Pathway of RNA Binding to the Escherichia coli Transcription Termination Factor Rho*

D. Kim, Smita S. Patel, S. Patel, 2001, The Journal of Biological Chemistry.

A ring‐opening mechanism for DNA binding in the central channel of the T7 helicase–primase protein

Smita S. Patel, K. M. Picha, Peter Ahnert, 2000, The EMBO journal.

Kinetic Pathway of dTTP Hydrolysis by Hexameric T7 Helicase-Primase in the Absence of DNA*

Dong-Eun Kim, Smita S. Patel, Yong-Joo Jeong, 2002, The Journal of Biological Chemistry.

Transcription Termination Factor Rho Contains Three Noncatalytic Nucleotide Binding Sites*

D. Kim, K. Shigesada, Smita S. Patel, 1999, The Journal of Biological Chemistry.

Structural basis for processivity and antiviral drug toxicity in human mitochondrial DNA replicase

Smita S. Patel, G. Patel, Qingchao Meng, 2015, The EMBO journal.

Methods to study the coupling between replicative helicase and leading-strand DNA polymerase at the replication fork.

Smita S. Patel, Divya Nandakumar, 2016, Methods.

Helicase Unwinding at the Replication Fork

Smita S. Patel, Divya Nandakumar, 2013 .

Experimental and computational analysis of DNA unwinding and polymerization kinetics.

Smita S. Patel, M. Pandey, Mikhail K. Levin, 2010, Methods in molecular biology.

Structural biology: Steps in the right direction

Smita S. Patel, 2009, Nature.

Coupling of DNA unwinding to nucleotide hydrolysis in a ring‐shaped helicase

Smita S. Patel, I. Donmez, 2008, The EMBO journal.

Nucleic Acid Unwinding by Hepatitis C Virus and Bacteriophage T7 Helicases Is Sensitive to Base Pair Stability*

Smita S. Patel, V. Rajagopal, I. Donmez, 2007, Journal of Biological Chemistry.

ATP-Induced Helicase Slippage Reveals Highly Coordinated Subunits

Michelle D. Wang, Smita S. Patel, M. Pandey, 2011, Nature.

Asymmetric Interactions of Hexameric Bacteriophage T7 DNA Helicase with the 5′- and 3′-Tails of the Forked DNA Substrate*

Smita S. Patel, P. Ahnert, 1997, The Journal of Biological Chemistry.

Fluorescence methods for studying the kinetics and thermodynamics of transcription initiation.

Smita S. Patel, R. P. Bandwar, 2003, Methods in enzymology.

Transcription Factor-dependent DNA Bending Governs Promoter Recognition by the Mitochondrial RNA Polymerase*

Smita S Patel, Smita S. Patel, Guo-Qing Tang, 2011, The Journal of Biological Chemistry.

The N-terminal domain of human mitochondrial helicase Twinkle has DNA-binding activity crucial for supporting processive DNA synthesis by polymerase γ

Smita S. Patel, Laura C. Johnson, Anupam Singh, 2022, bioRxiv.

A257T Linker Region Mutant of T7 Helicase-Primase Protein Is Defective in DNA Loading and Rescued by T7 DNA Polymerase*

Michelle D. Wang, E. Egelman, Xiong Yu, 2011, The Journal of Biological Chemistry.

Selection, Identification, and Genetic Analysis of Random Mutants in the Cloned Primase/Helicase Gene of Bacteriophage T7*

F. Studier, A. H. Rosenberg, M. Washington, 1996, The Journal of Biological Chemistry.

Nucleotide Binding Induces Conformational Changes in Escherichia coli Transcription Termination Factor Rho*

Dong-Eun Kim, Smita S. Patel, Yong-Joo Jeong, 2004, Journal of Biological Chemistry.

The intercalating beta-hairpin of T7 RNA polymerase plays a role in promoter DNA melting and in stabilizing the melted DNA for efficient RNA synthesis.

Smita S. Patel, Natalie M. Stano, 2002, Journal of molecular biology.

The Transition to an Elongation Complex by T7 RNA Polymerase Is a Multistep Process*

M. Anikin, W. Mcallister, D. Vassylyev, 2007, Journal of Biological Chemistry.

DNA polymerase beta. 5. Dissecting the functional roles of the two metal ions with Cr(III)dTTP

X. Zhong, M. Tsai, Smita S. Patel, 1998 .

DNA Polymerase β: Multiple Conformational Changes in the Mechanism of Catalysis†

X. Zhong, B. Werneburg, M. Tsai, 1997 .

Fluorescence Mapping of the Open Complex of Yeast Mitochondrial RNA Polymerase*

Smita S. Patel, G. Tang, S. Paratkar, 2009, Journal of Biological Chemistry.

Enzymic synthesis of L-acetylcarnitine and citric acid using acetyl coenzyme A recycling

D. Walt, Smita S. Patel, H. D. Conlon, 1986 .

Overcoming a nucleosomal barrier to replication

Smita S. Patel, V. Studitsky, M. Pandey, 2016, Science Advances.

Assembly and Cryo-EM structure determination of yeast mitochondrial RNA polymerase initiation complex intermediates

K. Das, C. Dharia, Smita S. Patel, 2021, STAR protocols.

HDX-MS reveals dysregulated checkpoints that compromise discrimination against self RNA during RIG-I mediated autoimmunity

Ruben D. Garcia-Ordonez, P. Griffin, Smita S. Patel, 2018, Nature Communications.

Escherichia coli RNase R Has Dual Activities, Helicase and RNase

M. Inouye, J. Hunt, Smita S. Patel, 2009, Journal of bacteriology.

The C-terminal tails of the mitochondrial transcription factors Mtf1 and TFB2M are part of an autoinhibitory mechanism that regulates DNA binding

Smita S. Patel, Laura C. Johnson, Urmimala Basu, 2020, The Journal of Biological Chemistry.

Helicase promotes replication re-initiation from an RNA transcript

Michelle D. Wang, Smita S. Patel, James T. Inman, 2018, bioRxiv.

Peculiar 2-Aminopurine Fluorescence Monitors the Dynamics of Open Complex Formation by Bacteriophage T7 RNA Polymerase*

Smita S. Patel, S S Patel, S. Patel, 2001, The Journal of Biological Chemistry.

RIG-I recognizes metabolite-capped RNAs as signaling ligands

Smita S. Patel, Pranita Hanpude, Brandon D Schweibenz, 2023, Nucleic acids research.

Autotomic behavior of the propeptide in propeptide-mediated folding of prosubtilisin E.

M. Inouye, Smita S. Patel, Liliana Falzon, 2007, Journal of molecular biology.

Kinetic analysis of macromolecules : a practical approach

Smita S. Patel, K. Johnson, R. P. Bandwar, 2003 .

Model-based global analysis of heterogeneous experimental data using gfit.

Mikhail K Levin, Manju M Hingorani, Raquell M Holmes, 2009, Methods in molecular biology.

Bacteriophage T7 helicase/primase proteins form rings around single-stranded DNA that suggest a general structure for hexameric helicases.

E. Egelman, Xiong Yu, M. Hingorani, 1995, Proceedings of the National Academy of Sciences of the United States of America.

Kinetic and thermodynamic basis of promoter strength: multiple steps of transcription initiation by T7 RNA polymerase are modulated by the promoter sequence.

Smita S. Patel, R. P. Bandwar, Yiping Jia, 2002, Biochemistry.

Kinetic partitioning between the exonuclease and polymerase sites in DNA error correction.

Smita S. Patel, M. Donlin, K. Johnson, 1991, Biochemistry.

Pre-steady-state kinetic analysis of processive DNA replication including complete characterization of an exonuclease-deficient mutant.

Smita S. Patel, K. Johnson, S. Patel, 1991, Biochemistry.

Error-prone replication of repeated DNA sequences by T7 DNA polymerase in the absence of its processivity subunit.

T. Kunkel, Smita S. Patel, K. Johnson, 1994, Proceedings of the National Academy of Sciences of the United States of America.

Structural basis for processivity and antiviral drug toxicity in human mitochondrial DNA replicase

Smita S. Patel, G. Patel, Qingchao Meng, 2015, The EMBO journal.

Highly efficient 5 ' capping of mitochondrial RNA with NAD + and NADH by yeast 1 and human mitochondrial RNA polymerase 2 3

R. Ebright, D. Wallace, Smita S. Patel, 2022 .

Applying Modified K-Nearest Neighbor toDetect Insider Threat in CollaborativeInformation Systems

Aruna Singh, Smita Shukla Patel, Smita S. Patel, 2014 .

Escherichia coli RNase R Has Dual Activities, Helicase and RNase

M. Inouye, J. Hunt, Smita S. Patel, 2009, Journal of bacteriology.

Involvement of Neurospora mitochondrial tyrosyl-tRNA synthetase in RNA splicing. A new method for purifying the protein and characterization of physical and enzymatic properties pertinent to splicing.

R. Saldanha, A. Lambowitz, Smita S. Patel, 1995, Biochemistry.

Loss of Chromosome 16 From Renal Epithelial Cells in Humans

J. Skurnick, A. Aviv, P. Wilson, 2002, Hypertension.

The dynamic landscape of transcription initiation in yeast mitochondria

Seung-won Lee, K. Das, Hajin Kim, 2020, Nature Communications.

Auto-inhibitory regulation of DNA binding by the C-terminal tails of the mitochondrial transcription factors Mtf1 and TFB2M

Smita S. Patel, Laura C. Johnson, Urmimala Basu, 2020, bioRxiv.