S. Marqués

发表

Promoter‐upstream activator sequences are required for expression of the xylS gene and upper‐pathway operon on the Pseudomonas TOL plasmid

K. Timmis, J. Ramos, M. Abril, 1990, Molecular microbiology.

Evidence for in situ crude oil biodegradation after the Prestige oil spill.

J. Ramos, S. Marqués, J. Medina-Bellver, 2005, Environmental microbiology.

Transcriptional control of the Pseudomonas TOL plasmid catabolic operons is achieved through an interplay of host factors and plasmid-encoded regulators.

K. Timmis, J. Ramos, S. Marqués, 1997, Annual review of microbiology.

Occurrence and diversity of the oxidative hydroxyhydroquinone pathway for the anaerobic degradation of aromatic compounds in nitrate-reducing bacteria.

S. Marqués, Patricia Marín, Daniel Pacheco-Sánchez, 2019, Environmental microbiology reports.

Heterologous Expression and Identification of the Genes Involved in Anaerobic Degradation of 1,3-Dihydroxybenzene (Resorcinol) in Azoarcus anaerobius

S. Marqués, B. Schink, J. Medina-Bellver, 2007, Journal of bacteriology.

Diversity of benzylsuccinate synthase-like (bssA) genes in hydrocarbon-polluted marine sediments suggests substrate-dependent clustering.

R. Rosselló-Móra, S. Marqués, Alejandro Acosta-González, 2013, Applied and environmental microbiology.

The Azoarcus anaerobius 1,3-Dihydroxybenzene (Resorcinol) Anaerobic Degradation Pathway Is Controlled by the Coordinated Activity of Two Enhancer-Binding Proteins

S. Marqués, J. Medina-Bellver, Patricia Marín, 2017, Applied and Environmental Microbiology.

Taxonomic and functional metagenomic profiling of the microbial 2 community in the anoxic sediment of a sub-saline shallow lake ( Laguna 3 de Carrizo – Central Spain ) 4

J. Ramos, F. Rojo, R. Rosselló-Móra, 2011 .

Sequential XylS-CTD Binding to the Pm Promoter Induces DNA Bending Prior to Activation

J. Ramos, S. Marqués, P. Domínguez-Cuevas, 2010, Journal of bacteriology.

XylS-Pm promoter interactions through two helix-turn-helix motifs: identifying XylS residues important for DNA binding and activation.

J. Ramos, S. Marqués, Patricia Marín, 2008, Journal of molecular biology.

Current View of The Mechanisms Controlling The Transcription of The TOL Plasmid Aromatic Degradation Pathways

S. Marqués, P. Domínguez-Cuevas, 2017 .

RegulatorsEnhancer-Like Positive Family Receptor Domain of XylR, a Member of a Modulation of the Function of the Signal

J. Ramos, S. Marqués, R. Salto, 2012 .

22 Transcriptional Control of the TOL Plasmid Pathways

S. Marqués, P. Domínguez-Cuevas, 2010 .

Activation and Repression of Transcription at the Double Tandem Divergent Promoters for the xylR and xylS Genes of the TOL Plasmid of Pseudomonas putida

K. Timmis, J. Ramos, A. Holtel, 1998, Journal of bacteriology.

Modulation of the Function of the Signal Receptor Domain of XylR, a Member of a Family of Prokaryotic Enhancer-Like Positive Regulators

Asunción Delgado, S. Marqués, R. Salto, 1998, Journal of bacteriology.

Single Amino Acids Changes in the Signal Receptor Domain of XylR Resulted in Mutants That Stimulate Transcription in the Absence of Effectors (*)

J. Ramos, S. Marqués, R. Salto, 1995, The Journal of Biological Chemistry.

Gene expression in Pseudomonas

J. Ramos, S. Marqués, S. Marqués, 1993, World journal of microbiology & biotechnology.

Cross talk between catabolic pathways in Pseudomonas putida: XylS-dependent and -independent activation of the TOL meta operon requires the same cis-acting sequences within the Pm promoter

V. de Lorenzo, K. Timmis, J. Ramos, 1994, Journal of bacteriology.

Critical Nucleotides in the Upstream Region of the XylS-dependent TOL meta-Cleavage Pathway Operon Promoter as Deduced from Analysis of Mutants*

J. Ramos, S. Marqués, M. González-Pérez, 1999, The Journal of Biological Chemistry.

Laboratory research aimed at closing the gaps in microbial bioremediation.

J. Ramos, T. Krell, S. Marqués, 2011, Trends in biotechnology.

Bacterial nanocellulose production from naphthalene

A. Retegi, S. Marqués, A. Eceiza, 2019, Microbial biotechnology.

Analysis of the mRNA structure of the Pseudomonas putida TOL meta fission pathway operon around the transcription initiation point, the xylTE and the xylFJ regions.

K. Timmis, J. Ramos, S. Marqués, 1993, Biochimica et biophysica acta.

Purification and characterization of the ferredoxin-glutamate synthase from the unicellular cyanobacterium Synechococcus sp. PCC 6301.

S. Marqués, F. Florencio, P. Candau, 1992, European journal of biochemistry.

Carbon source-dependent inhibition of xyl operon expression of the Pseudomonas putida TOL plasmid

K. Timmis, A. Holtel, S. Marqués, 1994, Journal of bacteriology.

The effect of oil spills on the bacterial diversity and catabolic function in coastal sediments: a case study on the Prestige oil spill

R. Rosselló-Móra, S. Marqués, Alejandro Acosta-González, 2015, Environmental Science and Pollution Research.

New insights in the early extracellular events in hydrocarbon and lipid biodegradation.

S. Marqués, M. Espinosa-Urgel, 2017, Environmental microbiology.

The extracellular matrix of the oleolytic biofilms of Marinobacter hydrocarbonoclasticus comprises cytoplasmic proteins and T 2 SS effectors that promote growth on hydrocarbons and lipids

S. Marqués, M. Espinosa-Urgel, 2016 .

Bacterial diversity in oil-polluted marine coastal sediments.

S. Marqués, Alejandro Acosta-González, 2016, Current opinion in biotechnology.

XylS activator and RNA polymerase binding sites at the Pm promoter overlap

J. Ramos, S. Marqués, M. González-Pérez, 2002, FEBS letters.

Integration of Signals through Crc and PtsN in Catabolite Repression of Pseudomonas putida TOL Plasmid pWW0

J. Ramos, S. Marqués, I. Aranda-Olmedo, 2005, Applied and Environmental Microbiology.

Inducibility of the TOL catabolic pathway in Pseudomonas putida (pWW0) growing on succinate in continuous culture: evidence of carbon catabolite repression control

J. Ramos, W. Duetz, S. Marqués, 1994, Journal of bacteriology.

Role of the ptsN Gene Product in Catabolite Repression of the Pseudomonas putida TOL Toluene Degradation Pathway in Chemostat Cultures▿

J. Ramos, S. Marqués, Patricia Marín, 2006, Applied and Environmental Microbiology.

Highly mercury-resistant strains from different Colombian Amazon ecosystems affected by artisanal gold mining activities

S. Marqués, Patricia Marín, Alejandro Acosta-González, 2022, Applied Microbiology and Biotechnology.

Current View of the Mechanisms Controlling the Transcription of the TOL Plasmid Aromatic Degradation Pathways

S. Marqués, P. Domínguez-Cuevas, 2019, Aerobic Utilization of Hydrocarbons, Oils, and Lipids.

Subtle sequence differences between two interacting σ54‐dependent regulators lead to different activation mechanisms

S. Marqués, Patricia Marín, Daniel Pacheco-Sánchez, 2022, The FEBS journal.

Identification of the Gene Cluster for the Anaerobic Degradation of 3,5-Dihydroxybenzoate (α-Resorcylate) in Thauera aromatica Strain AR-1

S. Marqués, B. Schink, Patricia Marín, 2015, Applied and Environmental Microbiology.

Transcriptional Tradeoff between Metabolic and Stress-response Programs in Pseudomonas putida KT2440 Cells Exposed to Toluene*

V. de Lorenzo, J. Ramos, S. Marqués, 2006, Journal of Biological Chemistry.

Insights in the regulation of the degradation of PAHs in Novosphingobium sp. HR1a and utilization of this regulatory system as a tool for the detection of PAHs.

S. Marqués, A. Segura, Lázaro Molina, 2017, The Science of the total environment.

Combining electrokinetic transport and bioremediation for enhanced removal of crude oil from contaminated marine sediments: Results of a long-term, mesocosm-scale experiment.

F. Aulenta, N. Kalogerakis, F. Rojo, 2019, Water research.

Compiling Sigma-70-Dependent Promoters

S. Marqués, P. Domínguez-Cuevas, 2004 .

Repression of IS200 transposase synthesis by RNA secondary structures.

S. Marqués, J. Casadesús, C. Beuzón, 1999, Nucleic acids research.

Species-specific repetitive extragenic palindromic (REP) sequences in Pseudomonas putida.

J. Ramos, S. Marqués, M. Manzanera, 2002, Nucleic acids research.

Regulation of finP Transcription by DNA Adenine Methylation in the Virulence Plasmid of Salmonella enterica

S. Marqués, J. Casadesús, F. de la Cruz, 2005, Journal of bacteriology.

Roles of Effectors in XylS-Dependent Transcription Activation: Intramolecular Domain Derepression and DNA Binding

Juan L. Ramos, Stephen Busby, J. Ramos, 2008, Journal of bacteriology.

Response of sulfate-reducing bacteria to an artificial oil-spill in a coastal marine sediment.

R. Amann, R. Rosselló-Móra, S. Marqués, 2011, Environmental microbiology.

Polycyclic Aromatic Hydrocarbon-Induced Changes in Bacterial Community Structure under Anoxic Nitrate Reducing Conditions

S. Marqués, Patricia Marín, Sophie-Marie Martirani-von Abercron, 2016, Front. Microbiol..

Characterization of the anaerobic microbial community in oil-polluted subtidal sediments: aromatic biodegradation potential after the Prestige oil spill.

R. Rosselló-Móra, S. Marqués, Alejandro Acosta-González, 2013, Environmental microbiology.

RNA Polymerase Holoenzymes Can Share a Single Transcription Start Site for the Pm Promoter

J. Ramos, S. Marqués, Patricia Marín, 2005, Journal of Biological Chemistry.

Transcriptional Regulation of the Toluene Catabolic Pathways

S. Marqués, M. Ramos-González, P. Domínguez-Cuevas, 2004 .

Chapter 12 Regulation of toluene catabolic pathways and toluene efflux pump expression in bacteria of the genus Pseudomonas

J. Ramos, S. Marqués, E. Duque, 2004 .

Leucines 193 and 194 at the N-Terminal Domain of the XylS Protein, the Positive Transcriptional Regulator of the TOL meta-Cleavage Pathway, Are Involved in Dimerization

J. Ramos, S. Marqués, R. Ruíz, 2003, Journal of bacteriology.

Responses of Gram-negative bacteria to certain environmental stressors.

J. Ramos, S. Marqués, M. Ramos-González, 2001, Current opinion in microbiology.

Mutational analysis of the highly conserved C‐terminal residues of the XylS protein, a member of the AraC family of transcriptional regulators

J. Ramos, S. Marqués, M. Manzanera, 2000, FEBS letters.

The XylS‐dependent Pm promoter is transcribed in vivo by RNA polymerase with σ32 or σ38 depending on the growth phase

Juan L. Ramos, S. Marqués, M. González-Pérez, 1999 .

The TACAN4TGCA motif upstream from the -35 region in the sigma70-sigmaS-dependent Pm promoter of the TOL plasmid is the minimum DNA segment required for transcription stimulation by XylS regulators

J. Ramos, S. Marqués, M. Gallegos, 1996, Journal of bacteriology.

Ammonia assimilating enzymes from cyanobacteria: in situ and in vitro assay using high-performance liquid chromatography.

S. Marqués, F. Florencio, P. Candau, 1989, Analytical Biochemistry.

Light-mediated regulation of glutamine synthetase activity in the unicellular cyanobacterium Synechococcus sp. PCC 6301

Á. Mérida, S. Marqués, F. Florencio, 1992, Planta.

Transcriptional control of the Pseudomonas putida TOL plasmid catabolic pathways

J. Ramos, S. Marqués, 1993, Molecular microbiology.

Expression of the TOL plasmid xylS gene in Pseudomonas putida occurs from a alpha 70-dependent promoter or from alpha 70- and alpha 54-dependent tandem promoters according to the compound used for growth

J. Ramos, S. Marqués, M. Gallegos, 1996, Journal of bacteriology.

The TACAN 4 TGCA Motif Upstream from the (cid:50) 35 Region in the S -Dependent Pm Promoter of the TOL Plasmid Is the Minimum DNA Segment Required for Transcription Stimulation by XylS Regulators

J. Ramos, S. Marqués, M. Gallegos, 1996 .

stimulation by XylS regulators. DNA segment required for transcription promoter of the TOL plasmid is the minimum region in the sigma70-sigmaS-dependent Pm The TACAN4TGCA motif upstream from the -35

J. Ramos, S. Marqués, M. Gallegos, 2013 .

Role of σs in transcription from the positively controlled Pm promoter of the TOL plasmid of Pseudomonas putida

J. Ramos, S. Marqués, M. Gallegos, 1995, Molecular microbiology.

Catabolite repression of the toluene degradation pathway in Pseudomonas putida harboring pWW0 under various conditions of nutrient limitation in chemostat culture

J. Ramos, W. Duetz, S. Marqués, 1996, Applied and environmental microbiology.

Synthesis of FinP RNA by plasmids F and pSLT is regulated by DNA adenine methylation.

S. Marqués, J. Casadesús, J. Torreblanca, 1999, Genetics.

DbdR, a New Member of the LysR Family of Transcriptional Regulators, Coordinately Controls Four Promoters in the Thauera aromatica AR-1 3,5-Dihydroxybenzoate Anaerobic Degradation Pathway

S. Marqués, Patricia Marín, Daniel Pacheco-Sánchez, 2018, Applied and Environmental Microbiology.

Mineralization of p-methyl-14C-benzoate in soils by Pseudomonas putida (pWW0).

J. Ramos, S. Marqués, E. Duque, 1993, Microbial releases : viruses, bacteria, fungi.

Activation of the toluene‐responsive regulator XylR causes a transcriptional switch between σ54 and σ70 promoters at the divergent Pr/Ps region of the TOL plasmid

Giovanni Bertoni, Víctor De Lorenzo, V. de Lorenzo, 1998, Molecular microbiology.

Highly mercury-resistant strains from different Colombian Amazon ecosystems affected by artisanal gold mining activities

S. Marqués, Patricia Marín, Alejandro Acosta-González, 2022, Applied microbiology and biotechnology.

Naphthalene biodegradation under oxygen‐limiting conditions: community dynamics and the relevance of biofilm‐forming capacity

S. Marqués, Patricia Marín, Sophie-Marie Martirani-von Abercron, 2017, Microbial biotechnology.

The XylS-dependent Pm promoter is transcribed in vivo by RNA polymerase with sigma 32 or sigma 38 depending on the growth phase.

J. Ramos, S. Marqués, M. González-Pérez, 1999, Molecular microbiology.

Survival in Soil of Different Toluene-Degrading Pseudomonas Strains after Solvent Shock

S. Marqués, E. Duque, M. Huertas, 1998, Applied and Environmental Microbiology.

Controlling bacterial physiology for optimal expression of gene reporter constructs.

J. Ramos, S. Marqués, I. Aranda-Olmedo, 2006, Current opinion in biotechnology.

Transcriptional induction kinetics from the promoters of the catabolic pathways of TOL plasmid pWW0 of Pseudomonas putida for metabolism of aromatics

K. Timmis, J. Ramos, A. Holtel, 1994, Journal of bacteriology.

Cellular XylS Levels Are a Function of Transcription of xylS from Two Independent Promoters and the Differential Efficiency of Translation of the Two mRNAs

J. Ramos, S. Marqués, M. González-Pérez, 2004, Journal of bacteriology.

Molecular characterization of Pseudomonas putida KT2440 rpoH gene regulation.

J. Ramos, S. Marqués, M. Manzanera, 2001, Microbiology.

Taxonomic and Functional Metagenomic Profiling of the Microbial Community in the Anoxic Sediment of a Sub-saline Shallow Lake (Laguna de Carrizo, Central Spain)

J. Ramos, F. Rojo, R. Rosselló-Móra, 2011, Microbial Ecology.