Kaneyoshi Yamamoto

发表

Functional Characterization of the Receiver Domain for Phosphorelay Control in Hybrid Sensor Kinases

Y. Eguchi, R. Utsumi, E. Kinoshita, 2015, PloS one.

The hierarchic network of metal-response transcription factors in Escherichia coli

Kaneyoshi Yamamoto, Kaneyoshi Yamamoto, 2014, Bioscience, biotechnology, and biochemistry.

Characterization of CitA-CitB Signal Transduction Activating Genes Involved in Anaerobic Citrate Catabolism in Escherichia coli

N. Ogasawara, T. Oshima, N. Fujita, 2009, Bioscience, biotechnology, and biochemistry.

Novel Members of the Cra Regulon Involved in Carbon Metabolism in Escherichia coli

A. Ishihama, T. Shimada, Kaneyoshi Yamamoto, 2010, Journal of Bacteriology.

Novel Roles of cAMP Receptor Protein (CRP) in Regulation of Transport and Metabolism of Carbon Sources

N. Fujita, A. Ishihama, T. Shimada, 2011, PloS one.

Functional Characterization in Vitro of All Two-component Signal Transduction Systems from Escherichia coli*

R. Utsumi, T. Oshima, A. Ishihama, 2005, Journal of Biological Chemistry.

Transcription factor CecR (YbiH) regulates a set of genes affecting the sensitivity of Escherichia coli against cefoperazone and chloramphenicol.

A. Ishihama, Yuki Yamanaka, T. Shimada, 2016, Microbiology.

PdhR (Pyruvate Dehydrogenase Complex Regulator) Controls the Respiratory Electron Transport System in Escherichia coli

Akira Ishihama, Yuji Ishida, Kayoko Yamada, 2007, Journal of bacteriology.

Regulatory roles of pyruvate-sensing two-component system PyrSR (YpdAB) in Escherichia coli K-12.

A. Ishihama, Kaneyoshi Yamamoto, Yukari Miyake, 2019, FEMS microbiology letters.

Identification of the Set of Genes, Including Nonannotated morA, under the Direct Control of ModE in Escherichia coli

A. Ishihama, Tomoyuki Watanabe, Kaneyoshi Yamamoto, 2013, Journal of bacteriology.

Cytotoxic Mechanism of Excess Polyamines Functions through Translational Repression of Specific Proteins Encoded by Polyamine Modulon

A. Ishihama, G. Kawai, K. Kashiwagi, 2020, International journal of molecular sciences.

Epistatic Effect of Regulators to the Adaptive Growth of Escherichia coli

Kaneyoshi Yamamoto, Yukari Miyake, 2020, Scientific Reports.

Negative regulation of DNA repair gene (uvrA) expression by ArcA/ArcB two-component system in Escherichia coli.

R. Utsumi, A. Ishihama, Kaneyoshi Yamamoto, 2005, FEMS microbiology letters.

A Novel Two-Component Signaling System That Activates Transcription of an Enterohemorrhagic Escherichia coli Effector Involved in Remodeling of Host Actin

Nicola C. Reading, V. Sperandio, A. Torres, 2007, Journal of bacteriology.

Role of a non-natural beta-C-nucleotide unit in DNA as a template for DNA and RNA syntheses and as a substrate for nucleolytic digestion.

A. Ishihama, Kentaro Tanaka, Kaneyoshi Yamamoto, 2003, European journal of pharmaceutical sciences : official journal of the European Federation for Pharmaceutical Sciences.

Identiﬁcation and Molecular Characterization of the Mg 2 (cid:1) Stimulon of Escherichia coli

Y. Eguchi, R. Utsumi, T. Oshima, 2003 .

Targeting two-component signal transduction: a novel drug discovery system.

R. Utsumi, Kaneyoshi Yamamoto, E. Furuta, 2007, Methods in enzymology.

Screening of promoter-specific transcription factors: multiple regulators for the sdiA gene involved in cell division control and quorum sensing.

A. Ishihama, Kayoko Yamada, Yuki Yamanaka, 2013, Microbiology.

Role of the Bioﬁlm Master Regulator CsgD in Cross-Regulation between Bioﬁlm Formation and Flagellar Synthesis (cid:1) †

A. Ishihama, Kaneyoshi Yamamoto, H. Ogasawara, 2011 .

Isolation and characterization of inhibitors of the essential histidine kinase, YycG in Bacillus subtilis and Staphylococcus aureus.

R. Utsumi, A. Ishihama, Kaneyoshi Yamamoto, 2003, The Journal of antibiotics.

Negative Regulation of DNA Repair Gene (ung) Expression by the CpxR/CpxA Two-Component System in Escherichia coli K-12 and Induction of Mutations by Increased Expression of CpxR

R. Utsumi, A. Ishihama, Kaneyoshi Yamamoto, 2004, Journal of bacteriology.

Regulation of constant cell elongation and Sfm pili synthesis in Escherichia coli via two active forms of FimZ orphan response regulator

S. Iyoda, Yuki Yamanaka, Kaneyoshi Yamamoto, 2022, Genes to cells : devoted to molecular & cellular mechanisms.

Induction of YdeO, a Regulator for Acid Resistance Genes, by Ultraviolet Irradiation in Escherichia coli

A. Ishihama, Yuki Yamanaka, Kaneyoshi Yamamoto, 2012, Bioscience, biotechnology, and biochemistry.

Induction of the Escherichia coli cysK gene by genetic and environmental factors.

T. Oshima, A. Ishihama, G. Nonaka, 2011, FEMS microbiology letters.

Two Modes of Autoregulation of the murR Repressor in Escherichia coli

A. Ishihama, Kaneyoshi Yamamoto, Daiki Ishii, 2009, Bioscience, biotechnology, and biochemistry.

Involvement of multiple transcription factors for metal-induced spy gene expression in Escherichia coli.

A. Ishihama, Kaneyoshi Yamamoto, H. Ogasawara, 2008, Journal of biotechnology.

Involvement of the Leucine Response Transcription Factor LeuO in Regulation of the Genes for Sulfa Drug Efﬂux (cid:1) †

A. Ishihama, T. Shimada, Kaneyoshi Yamamoto, 2009 .

Altered Distribution of RNA Polymerase Lacking the Omega Subunit within the Prophages along the Escherichia coli K-12 Genome

A. Ishihama, Yuki Yamanaka, T. Shimada, 2018, mSystems.

In Vitro Properties of RpoS (σS) Mutants of Escherichia coli with Postulated N-Terminal Subregion 1.1 or C-Terminal Region 4 Deleted

A. Ishihama, J. Gowrishankar, Kaneyoshi Yamamoto, 2003, Journal of bacteriology.

Three Members of Polyamine Modulon under Oxidative Stress Conditions: Two Transcription Factors (SoxR and EmrR) and a Glutathione Synthetic Enzyme (GshA)

Hideyuki Suzuki, A. Ishihama, K. Kashiwagi, 2015, PloS one.

Signal Transduction Cascade between EvgA/EvgS and PhoP/PhoQ Two-Component Systems of Escherichia coli

Hirotada Mori, Akira Ishihama, Taku Oshima, 2004, Journal of bacteriology.

RutR is the uracil/thymine‐sensing master regulator of a set of genes for synthesis and degradation of pyrimidines

A. Ishihama, T. Shimada, Kaneyoshi Yamamoto, 2007, Molecular microbiology.

Regulatory Role of PlaR (YiaJ) for Plant Utilization in Escherichia coli K-12

A. Ishihama, T. Shimada, Kaneyoshi Yamamoto, 2019, Scientific Reports.

Enhancement of +1 Frameshift by Polyamines during Translation of Polypeptide Release Factor 2 in Escherichia coli*

A. Ishihama, K. Kashiwagi, Kaneyoshi Yamamoto, 2006, Journal of Biological Chemistry.

Role for σ38 in Prolonged Survival of Escherichia coli in Drosophila melanogaster

A. Ishihama, Kaneyoshi Yamamoto, A. Shiratsuchi, 2014, The Journal of Immunology.

Transcriptional Response of Escherichia coli to External Zinc

A. Ishihama, Kaneyoshi Yamamoto, 2005, Journal of bacteriology.

Two Trk/Ktr/HKT-type potassium transporters, TrkG and TrkH, perform distinct functions in Escherichia coli K-12

Kaneyoshi Yamamoto, N. Uozumi, K. Ihara, 2022, The Journal of biological chemistry.

Expression levels of transcription factors in Escherichia coli: growth phase- and growth condition-dependent variation of 90 regulators from six families.

A. Ishihama, Kaneyoshi Yamamoto, Hiroki Watanabe, 2014, Microbiology.

The QseC Adrenergic Signaling Cascade in Enterohemorrhagic E. coli (EHEC)

V. Sperandio, D. Rasko, Kaneyoshi Yamamoto, 2009, PLoS pathogens.

Expanded roles of two‐component response regulator OmpR in Escherichia coli: genomic SELEX search for novel regulation targets

A. Ishihama, T. Shimada, Kaneyoshi Yamamoto, 2015, Genes to cells : devoted to molecular & cellular mechanisms.

Cross-regulation between two common ancestral response regulators, HprR and CusR, in Escherichia coli.

A. Ishihama, Myu Yoshida, Kaneyoshi Yamamoto, 2017, Microbiology.

Cooperative regulation of the common target genes between H₂O₂-sensing YedVW and Cu²⁺-sensing CusSR in Escherichia coli.

Akira Ishihama, Kaneyoshi Yamamoto, A. Ishihama, 2015, Microbiology.

Characterization of Copper-Inducible Promoters Regulated by CpxA/CpxR in Escherichia coli

A. Ishihama, Kaneyoshi Yamamoto, 2006, Bioscience, biotechnology, and biochemistry.

Transcriptomic Responses of Bacterial Cells to Sublethal Metal Ion Stress

T. Oshima, J. Hobman, Kaneyoshi Yamamoto, 2007 .

Anaerobic Regulation of Citrate Fermentation by CitAB in Escherichia coli

Naotake Ogasawara, Akira Ishihama, Taku Oshima, 2008, Bioscience, biotechnology, and biochemistry.

Effect of Spermidine Analogues on Cell Growth of Escherichia coli Polyamine Requiring Mutant MA261

A. Ishihama, K. Kashiwagi, Kaneyoshi Yamamoto, 2016, PloS one.

Ribosome Modulation Factor, an Important Protein for Cell Viability Encoded by the Polyamine Modulon*

A. Ishihama, K. Kashiwagi, Kaneyoshi Yamamoto, 2010, The Journal of Biological Chemistry.

Title Differential Regulation of rRNA and tRNA Transcription from the rRNA-tRNA Composite Operon in Escherichia coli

A. Ishihama, T. Shimada, Kaneyoshi Yamamoto, 2018 .

Differential Regulation of rRNA and tRNA Transcription from the rRNA-tRNA Composite Operon in Escherichia coli

A. Ishihama, T. Shimada, Kaneyoshi Yamamoto, 2016, PloS one.

Characterization of the YdeO Regulon in Escherichia coli

T. Oshima, A. Ishihama, Yuki Yamanaka, 2014, PloS one.

Role of the Biofilm Master Regulator CsgD in Cross-Regulation between Biofilm Formation and Flagellar Synthesis

A. Ishihama, Kaneyoshi Yamamoto, H. Ogasawara, 2011, Journal of bacteriology.

Regulatory role of MlrA in transcription activation of csgD, the master regulator of biofilm formation in Escherichia coli.

A. Ishihama, Kaneyoshi Yamamoto, H. Ogasawara, 2010, FEMS microbiology letters.

Genomic SELEX Search for Target Promoters under the Control of the PhoQP-RstBA Signal Relay Cascade

Akira Ishihama, Kaneyoshi Yamamoto, A. Ishihama, 2007, Journal of bacteriology.

Syntheses and structure-activity relationships of nonnatural beta-C-nucleoside 5'-triphosphates bearing an aromatic nucleobase with phenolic hydroxy groups: inhibitory activities against DNA polymerases.

A. Ishihama, Kentaro Tanaka, Kaneyoshi Yamamoto, 2002, Journal of medicinal chemistry.

Dimerization site 2 of the bacterial DNA-binding protein H-NS is required for gene silencing and stiffened nucleoprotein filament formation

A. Ishihama, Jie Yan, I. Kawagishi, 2018, The Journal of Biological Chemistry.

Regulation of the Escherichia coli csgD promoter: interplay between five transcription factors.

A. Ishihama, Kayoko Yamada, Kaneyoshi Yamamoto, 2010, Microbiology.

Regulation of the E. coli csgD gene encoding the master regulator of biofilm formation: Interplay between multiple transcription factors

A. Ishihama, Kayoko Yamada, Kaneyoshi Yamamoto, 2009, 2009 International Symposium on Micro-NanoMechatronics and Human Science.

Involvement of the Leucine Response Transcription Factor LeuO in Regulation of the Genes for Sulfa Drug Efflux

A. Ishihama, T. Shimada, Kaneyoshi Yamamoto, 2009, Journal of bacteriology.

Novel mode of transcription regulation of divergently overlapping promoters by PhoP, the regulator of two‐component system sensing external magnesium availability

Akira Ishihama, Kaneyoshi Yamamoto, R. Utsumi, 2002, Molecular microbiology.

Cross talk in promoter recognition between six NarL‐family response regulators of Escherichia coli two‐component system

A. Ishihama, Myu Yoshida, Kaneyoshi Yamamoto, 2015, Genes to cells : devoted to molecular & cellular mechanisms.

Induction of the Escherichia coli yijE gene expression by cystine

Akira Ishihama, Kaneyoshi Yamamoto, A. Ishihama, 2015, Bioscience, biotechnology, and biochemistry.

Regulatory role of transcription factor SutR (YdcN) in sulfur utilization in Escherichia coli.

Akira Ishihama, Masahiro Nakano, Kaneyoshi Yamamoto, 2015, Microbiology.

A novel regulator RcdA of the csgD gene encoding the master regulator of biofilm formation in Escherichia coli

Akira Ishihama, Masahiro Nakano, Kaneyoshi Yamamoto, 2012, MicrobiologyOpen.

Transcriptional regulation of drug efflux genes by EvgAS, a two-component system in Escherichia coli.

H. Mori, Y. Eguchi, R. Utsumi, 2003, Microbiology.

Identification and Molecular Characterization of the Mg2+ Stimulon of Escherichia coli

Hirotada Mori, Akira Ishihama, Taku Oshima, 2003, Journal of bacteriology.

Antibacterial Agents that Inhibit Histidine Protein Kinase YycG of Bacillus subtilis

R. Utsumi, T. Watanabe, T. Okamoto, 2001, Bioscience, biotechnology, and biochemistry.

Involvement of cAMP-CRP in transcription activation and repression of the pck gene encoding PEP carboxykinase, the key enzyme of gluconeogenesis.

A. Ishihama, T. Shimada, Kaneyoshi Yamamoto, 2014, FEMS microbiology letters.

A Unifying Model for the Role of Polyamines in Bacterial Cell Growth, the Polyamine Modulon*

A. Ishihama, H. Makinoshima, K. Kashiwagi, 2004, Journal of Biological Chemistry.

Transcriptional response of Escherichia coli to external copper

Akira Ishihama, Kaneyoshi Yamamoto, A. Ishihama, 2005, Molecular microbiology.

Novel regulation targets of the metal-response BasS-BasR two-component system of Escherichia coli.

A. Ishihama, Kaneyoshi Yamamoto, H. Ogasawara, 2012, Microbiology.

Isolation and Molecular Characterization of the Locked-on Mutant of Mg2+ Sensor PhoQ in Escherichia coli

R. Utsumi, Kaneyoshi Yamamoto, S. Minagawa, 2005, Bioscience, biotechnology, and biochemistry.

Involvement of EnvZ-OmpR two-component system in virulence control of Escherichia coli in Drosophila melanogaster.

A. Ishihama, Kaneyoshi Yamamoto, A. Shiratsuchi, 2013, Biochemical and biophysical research communications.

Novel mode of transcription regulation by SdiA, an Escherichia coli homologue of the quorum‐sensing regulator

N. Fujita, A. Ishihama, Kaneyoshi Yamamoto, 2001, Molecular microbiology.

Profiling of protein thiophosphorylation by Phos‐tag affinity electrophoresis: Evaluation of adenosine 5′‐O‐(3‐thiotriphosphate) as a phosphoryl donor in protein kinase reactions

E. Kinoshita, Emiko Kinoshita-Kikuta, T. Koike, 2014, Proteomics.

Regulatory role of XynR (YagI) in catabolism of xylonate in Escherichia coli K‐12

A. Ishihama, Yuki Yamanaka, T. Shimada, 2017, FEMS microbiology letters.

Genomic SELEX for the genome-wide search of regulation targets by transcription factors: SELEX-clos and SELEX-chip procedures

N. Fujita, A. Ishihama, T. Shimada, 2009, 2009 International Symposium on Micro-NanoMechatronics and Human Science.

Two different modes of transcription repression of the Escherichia coli acetate operon by IclR

Akira Ishihama, Kaneyoshi Yamamoto, A. Ishihama, 2002, Molecular microbiology.

Enhancement of the Synthesis of RpoE and StpA by Polyamines at the Level of Translation in Escherichia coli under Heat Shock Conditions

A. Ishihama, K. Kashiwagi, Kaneyoshi Yamamoto, 2009, Journal of bacteriology.

Enhanced biofilm formation and/or cell viability by polyamines through stimulation of response regulators UvrY and CpxR in the two-component signal transducing systems, and ribosome recycling factor.

A. Ishihama, K. Kashiwagi, Kaneyoshi Yamamoto, 2012, The international journal of biochemistry & cell biology.

The Escherichia coli K-12 MntR Miniregulon Includes dps, Which Encodes the Major Stationary-Phase DNA-Binding Protein

Akira Ishihama, Kaneyoshi Yamamoto, A. Ishihama, 2011, Journal of bacteriology.

Increase in cell viability by polyamines through stimulation of the synthesis of ppGpp regulatory protein and ω protein of RNA polymerase in Escherichia coli.

A. Ishihama, K. Kashiwagi, Kaneyoshi Yamamoto, 2012, The international journal of biochemistry & cell biology.

Enhancement of the Synthesis of RpoN, Cra, and H-NS by Polyamines at the Level of Translation in Escherichia coli Cultured with Glucose and Glutamate

A. Ishihama, K. Kashiwagi, Kaneyoshi Yamamoto, 2007, Journal of bacteriology.

Regulatory role of CsqR (YihW) in transcription of the genes for catabolism of the anionic sugar sulfoquinovose (SQ) in Escherichia coli K-12.

A. Ishihama, T. Shimada, Kaneyoshi Yamamoto, 2019, Microbiology.

and Akira Ishihama to External Zinc coli Escherichia Transcriptional Response of

A. Ishihama, Kaneyoshi Yamamoto, 2005 .

Targeting protein homodimerization: A novel drug discovery system

R. Utsumi, K. Watabe, Kaneyoshi Yamamoto, 2005, FEBS letters.

Comprehensive analysis fortherecognition sequences ofDNA-binding transcription factors within theE.coli genomeusingthenewlydeveloped "Promoter Chip"

T. Shimada, Kaneyoshi Yamamoto, 2008 .

Novel regulation targets of the metal-response BasS-BasR two-component system of Escherichia coli.

A. Ishihama, Kaneyoshi Yamamoto, H. Ogasawara, 2012, Microbiology.

Regulatory role of MlrA in transcription activation of csgD, the master regulator of biofilm formation in Escherichia coli.

A. Ishihama, Kaneyoshi Yamamoto, H. Ogasawara, 2010, FEMS microbiology letters.

Molecular Characterization of the Essential Response Regulator Protein YycF in Bacillus subtilis

R. Utsumi, Kaneyoshi Yamamoto, T. Fukamizo, 2004, Journal of Molecular Microbiology and Biotechnology.

Involvement of cAMP-CRP in transcription activation and repression of the pck gene encoding PEP carboxykinase, the key enzyme of gluconeogenesis.

A. Ishihama, T. Shimada, Kaneyoshi Yamamoto, 2014, FEMS microbiology letters.

Single molecule analysis of transcription factor-DNA complexes using atomic force microscopy

Masahiro Nakano, Tomohiro Shimada, Akira Ishihama, 2011, 2011 International Symposium on Micro-NanoMechatronics and Human Science.