Shuangjia Zheng

发表

Deep learning enables discovery of highly potent anti-osteoporosis natural products.

Zhihong Liu, Dane Huang, Shuangjia Zheng, 2020, European journal of medicinal chemistry.

Deep Learning Enables Accurate Diagnosis of Novel Coronavirus (COVID-19) With CT Images

Yuedong Yang, Y. Chong, Shuangjia Zheng, 2020, IEEE/ACM Transactions on Computational Biology and Bioinformatics.

To improve the predictions of binding residues with DNA, RNA, carbohydrate, and peptide via multiple-task deep neural networks

Yi Pan, Yuedong Yang, Huiying Zhao, 2020, bioRxiv.

Interpretable Retrosynthesis Prediction in Two Steps

Junzhou Huang, P. Zhao, Shuangjia Zheng, 2020 .

RetroXpert: Decompose Retrosynthesis Prediction Like A Chemist

Yang Yu, Peilin Zhao, Shuangjia Zheng, 2020, NeurIPS 2020.

MolRep: A Deep Representation Learning Library for Molecular Property Prediction

Yuedong Yang, Chengtao Li, Shuangjia Zheng, 2021, bioRxiv.

SyntaLinker: Automatic Fragment Linking with Deep Conditional Transformer Neural Networks

Shuangjia Zheng, Hongming Chen, Chao Zhao, 2020 .

Deep learning driven biosynthetic pathways navigation for natural products with BioNavi-NP

Connor W. Coley, Yuedong Yang, Chengtao Li, 2022, Nature Communications.

Predicting Retrosynthetic Reaction using Self-Corrected Transformer Neural Networks pdf

Yuedong Yang, Jun Xu, Shuangjia Zheng, 2019, ArXiv.

Quantitative evaluation of explainable graph neural networks for molecular property prediction pdf

Jiahua Rao, Yuedong Yang, Shuangjia Zheng, 2021, Patterns.

Amelioration of Alzheimer’s disease pathology by mitophagy inducers identified via machine learning and a cross-species workflow

K. Caldwell, G. Caldwell, K. Palikaras, 2022, Nature Biomedical Engineering.

A Deep Learning Based Scaffold Hopping Strategy for the Design of Kinase Inhibitors

Hongming Chen, Shuangjia Zheng, L Hu, 2021 .

Deep scaffold hopping with multimodal transformer neural networks

Yuedong Yang, Zengrong Lei, Shuangjia Zheng, 2020, Journal of Cheminformatics.

AlphaFold2-aware protein-DNA binding site prediction using graph transformer

Yuedong Yang, Huiying Zhao, Shuangjia Zheng, 2022, Briefings Bioinform..

Deep Learning Enables Accurate Diagnosis of Novel Coronavirus (COVID-19) With CT Images

Yuedong Yang, Shuangjia Zheng, Yunfei Yunfei Zha Zha, 2021, Ieee/Acm Transactions on Computational Biology and Bioinformatics.

PharmKG: a dedicated knowledge graph benchmark for bomedical data mining

Yuedong Yang, Shuangjia Zheng, Ying Song, 2020, Briefings Bioinform..

Predicting drug–protein interaction using quasi-visual question answering system

Shuangjia Zheng, Sheng Chen, Yongjian Li, 2020, Nat. Mach. Intell..

QBMG: quasi-biogenic molecule generator with deep recurrent neural network

Jun Xu, Yuedong Yang, Xin Yan, 2019, Journal of Cheminformatics.

Identifying Structure-Property Relationships through SMILES Syntax Analysis with Self-Attention Mechanism

Yuedong Yang, Xin Yan, Jun Xu, 2018, J. Chem. Inf. Model..

RetroXpert: Decompose Retrosynthesis Prediction like a Chemist pdf

Yang Yu, Peilin Zhao, Shuangjia Zheng, 2020, NeurIPS.

TANKBind: Trigonometry-Aware Neural NetworKs for Drug-Protein Binding Structure Prediction

Chengtao Li, Shuangjia Zheng, Jiahua Rao, 2022, bioRxiv.

Structure-Aware Multimodal Deep Learning for Drug-Protein Interaction Prediction

Yuedong Yang, Chengtao Li, Shuangjia Zheng, 2022, J. Chem. Inf. Model..

Predicting drug–protein interaction using quasi-visual question answering system

Yongjian Li, Shuangjia Zheng, Jun Xu, 2019, Nature Machine Intelligence.

Communicative Message Passing for Inductive Relation Reasoning

Haifeng Hu, Shuangjia Zheng, Sijie Mai, 2020, AAAI.

Meta Learning for Low-Resource Molecular Optimization

Jianwen Chen, Yuedong Yang, Shuangjia Zheng, 2021, J. Chem. Inf. Model..

Structure-aware protein solubility prediction from sequence through graph convolutional network and predicted contact map

Yuedong Yang, Shuangjia Zheng, Huiying Zhao, 2020, bioRxiv.

Measurement of the transverse momentum distribution of W bosons in pp collisions at √s = 7 TeV with the ATLAS detector

Bb, Dd, D. Whiteson, 2012 .

Hybrid Contrastive Learning of Tri-Modal Representation for Multimodal Sentiment Analysis pdf

Sijie Mai, Haifeng Hu, Shuangjia Zheng, 2021, IEEE Transactions on Affective Computing.

Communicative Representation Learning on Attributed Molecular Graphs

Yuedong Yang, Yutong Lu, Shuangjia Zheng, 2020, IJCAI.

Learning Attributed Graph Representations with Communicative Message Passing Transformer pdf

Jiahua Rao, Jianwen Chen, Yuedong Yang, 2021, IJCAI.

Precise estimation of residue relative solvent accessible area from Cα atom distance matrix using a deep learning method.

Shuangjia Zheng, Jianzhao Gao, Mengting Yao, 2021, Bioinformatics.

Measurement of the transverse momentum distribution of W bosons in pp collisions at √s = 7 TeV with the ATLAS detector

Bb, Dd, D. Whiteson, 2012 .

Measurement of the transverse momentum distribution of W bosons in pp collisions at √s = 7 TeV with the ATLAS detector

Bb, Dd, B. Wosiek, 2012 .

Measurement of the transverse momentum distribution of W bosons in pp collisions at √s = 7 TeV with the ATLAS detector

Bb, Dd, B. Wosiek, 2012 .

Strategy for instantaneous formaldehyde (CH2O) imaging by planar laser-induced fluorescence (PLIF) in a scramjet with intense flame emissions

Zhenguo Wang, Shuangjia Zheng, Minggang Wan, 2023, Combustion and Flame.

SyntaLinker: automatic fragment linking with deep conditional transformer neural networks

Shuangjia Zheng, Hongming Chen, Chao Zhao, 2020, Chemical science.

Predicting the Feasibility of Copper(I)-Catalyzed Alkyne-Azide Cycloaddition Reactions Using a Recurrent Neural Network with a Self-Attention Mechanism

Chao Zhao, Jun Xu, Shuangjia Zheng, 2020, J. Chem. Inf. Model..

Predicting Retrosynthetic Reactions Using Self-Corrected Transformer Neural Networks

Jun Xu, Shuangjia Zheng, Jiahua Rao, 2019, J. Chem. Inf. Model..