Xin Lin

发表

H3K27me3 natural variation selectively marks genes predicted to be important for differentiation in unicellular algae

A. Genovesio, Alaguraj Veluchamy, C. Bowler, 2020 .

Physiological and molecular responses to ocean acidification among strains of a model diatom

K. Gao, C. Bowler, Xin Lin, 2020, Limnology and Oceanography.

An integrative analysis of post-translational histone modifications in the marine diatom Phaeodactylum tricornutum

Alaguraj Veluchamy, C. Bowler, A. Allen, 2015, Genome Biology.

Transcriptomic and physiological analyses of the dinoflagellate Karenia mikimotoi reveal non‐alkaline phosphatase‐based molecular machinery of ATP utilisation

Senjie Lin, Xin Lin, Hao Luo, 2017, Environmental microbiology.

Genome-Wide Analysis of NAC Gene Family in Betula pendula

S. Chen, Xin Lin, Xiyang Zhao, 2019, Forests.

Comparative transcriptomics unveil distinctive metabolic pathway of phosphonate utilization by diatom Phaeodactylum tricornutum

Xin Lin, Ling Li, Yanchun You, 2022, bioRxiv.

Non-Conventional Metal Ion Cofactor Requirement of Dinoflagellate Alkaline Phosphatase and Translational Regulation by Phosphorus Limitation

Senjie Lin, Xin Lin, Ling Li, 2019, Microorganisms.

Histone extraction protocol from the two model diatoms Phaeodactylum tricornutum and Thalassiosira pseudonana.

C. Bowler, L. Tirichine, Bérangère Lombard, 2014, Marine genomics.

Functional differentiation and complementation of alkaline phosphatases and choreography of DOP scavenging in a marine diatom

Senjie Lin, Xin Lin, Ling Li, 2022, Molecular ecology.

Comparative Genomics Reveals Two Major Bouts of Gene Retroposition Coinciding with Crucial Periods of Symbiodinium Evolution

Wenbin Chen, Shifeng Cheng, Xin Liu, 2017, Genome biology and evolution.

Genome Size, rDNA Copy, and qPCR Assays for Symbiodiniaceae

Senjie Lin, Xin Lin, Ling Li, 2020, Frontiers in Microbiology.

The Symbiodinium kawagutii genome illuminates dinoflagellate gene expression and coral symbiosis

Huanming Yang, Jun Wang, Shifeng Cheng, 2015, Science.

Elevated pCO2 Impedes Succession of Phytoplankton Community From Diatoms to Dinoflagellates Along With Increased Abundance of Viruses and Bacteria

Tifeng Wang, He Li, Nanou Bao, 2021, Frontiers in Marine Science.

Genome Improvement and Core Gene Set Refinement of Fugacium kawagutii

Senjie Lin, Xin Lin, Yue Song, 2020, Microorganisms.

Species richness and generalists–specialists mosaicism of symbiodiniacean symbionts in corals from Hong Kong revealed by high-throughput ITS sequencing

Senjie Lin, Xin Lin, Ling Li, 2021, Coral Reefs.

Transcriptomic-Guided Phosphonate Utilization Analysis Unveils Evidence of Clathrin-Mediated Endocytosis and Phospholipid Synthesis in the Model Diatom, Phaeodactylum tricornutum

Xin Lin, Ling Li, Yanchun You, 2022, mSystems.

Insights into the role of DNA methylation in diatoms by genome-wide profiling in Phaeodactylum tricornutum.

Jaysheel D. Bhavsar, Gregory K. Farrant, T. Creasy, 2013, Nature Communications.

Insights into the role of DNA methylation in diatoms by genome-wide profiling in Phaeodactylum tricornutum

Jaysheel D. Bhavsar, Gregory K. Farrant, T. Creasy, 2013, Nature Communications.

Remarkable Metabolic Reconfiguration due to N Deficiency and an Ammonium‐to‐Nitrate Shift in the Free‐Living Effrenium voratum (Symbiodiniaceae)

Senjie Lin, Xin Lin, Liying Yu, 2021 .

Glyphosate Shapes a Dinoflagellate-Associated Bacterial Community While Supporting Algal Growth as Sole Phosphorus Source

Senjie Lin, Xin Lin, Ling Li, 2017, Front. Microbiol..

Differential Growth Responses of Marine Phytoplankton to Herbicide Glyphosate

Senjie Lin, Xin Lin, Ling Li, 2016, PloS one.

Genome wide natural variation of H3K27me3 selectively marks genes predicted to be important for cell differentiation in Phaeodactylum tricornutum.

A. Genovesio, Alaguraj Veluchamy, C. Bowler, 2020, The New phytologist.

Genome wide natural variation of H3K27me3 selectively marks genes predicted to be important for cell differentiation in Phaeodactylum tricornutum

A. Genovesio, Alaguraj Veluchamy, C. Bowler, 2019, bioRxiv.

A Potential Role for Epigenetic Processes in the Acclimation Response to Elevated pCO2 in the Model Diatom Phaeodactylum tricornutum

K. Gao, C. Bowler, L. Tirichine, 2018, bioRxiv.

PhnW-PhnX Pathway in Dinoflagellates Not Functional to Utilize Extracellular Phosphonates

Senjie Lin, Huan Zhang, Xin Lin, 2016, Front. Mar. Sci..

Probing the evolutionary history of epigenetic mechanisms: what can we learn from marine diatoms

Achal Rastogi, L. Tirichine, Bérangère Lombard, 2015, AIMS Genetics.

Protocol: Chromatin immunoprecipitation (ChIP) methodology to investigate histone modifications in two model diatom species

C. Bowler, L. Tirichine, Xin Lin, 2012, Plant methods.

Comparative metatranscriptomic profiling and microRNA sequencing to reveal active metabolic pathways associated with a dinoflagellate bloom.

Senjie Lin, Xin Lin, Mei-zhen Li, 2020, The Science of the total environment.

Alkaline phosphatase gene sequence characteristics and transcriptional regulation by phosphate limitation in Karenia brevis (Dinophyceae)

Senjie Lin, Huan Zhang, Bangqin Huang, 2012 .

Phylogenetic Analyses of Three Genes of Pedinomonas noctilucae, the Green Endosymbiont of the Marine Dinoflagellate Noctiluca scintillans, Reveal its Affiliation to the Order Marsupiomonadales (Chlorophyta, Pedinophyceae) under the Reinstated Name Protoeuglena noctilucae.

Senjie Lin, Xin Lin, J. Goes, 2016, Protist.

Metatranscriptomic Signatures Associated With Phytoplankton Regime Shift From Diatom Dominance to a Dinoflagellate Bloom

Senjie Lin, Xin Lin, Xinguo Shi, 2019, Front. Microbiol..

An integrative analysis of post-translational histone modifications in the marine diatom Phaeodactylum tricornutum

Alaguraj Veluchamy, C. Bowler, A. Allen, 2015, Genome Biology.

Single‐base methylome profiling of the giant kelp Saccharina japonica reveals significant differences in DNA methylation to microalgae and plants

M. Pellegrini, L. Tirichine, Xin Lin, 2019, The New phytologist.

Phytate as a Phosphorus Nutrient with Impacts on Iron Stress-Related Gene Expression for Phytoplankton: Insights from the Diatom Phaeodactylum tricornutum

Senjie Lin, Xin Lin, Ling Li, 2021, Applied and environmental microbiology.

Identification and Expression Analysis of an Atypical Alkaline Phosphatase in Emiliania huxleyi

Senjie Lin, Xin Lin, Cong Wang, 2018, Front. Microbiol..

Rapidly diverging evolution of an atypical alkaline phosphatase (PhoAaty) in marine phytoplankton: insights from dinoflagellate alkaline phosphatases

Senjie Lin, Xin Lin, Xinguo Shi, 2015, Front. Microbiol..

High Sequence Variability, Diverse Subcellular Localizations, and Ecological Implications of Alkaline Phosphatase in Dinoflagellates and Other Eukaryotic Phytoplankton

Senjie Lin, Huan Zhang, Xin Lin, 2012, Front. Microbio..

Alkaline Phosphatase Gene Sequence And Transcriptional Regulation By Phosphate Limitation In Amphidinium Carterae (Dinophyceae) 1

Senjie Lin, Huan Zhang, Bangqin Huang, 2011, Journal of phycology.

Niches and Seasonal Changes, Rather Than Transgenic Events, Affect the Microbial Community of Populus × euramericana ‘Neva’

Xin Lin, Yachao Ren, Minsheng Yang, 2022, Frontiers in Microbiology.

High throughput sequencing of 18S rRNA and its gene to characterize a Prorocentrum shikokuense (Dinophyceae) bloom.

Senjie Lin, Xin Lin, Hao Luo, 2020, Harmful algae.

Differential responses of bloom-forming Ulva intestinalis and economically important Gracilariopsis lemaneiformis to marine heatwaves under changing nitrate conditions.

Xin Lin, Ruiping Huang, Guang Gao, 2022, The Science of the total environment.

Transcriptomic and microRNAomic profiling reveals multi-faceted mechanisms to cope with phosphate stress in a dinoflagellate

Senjie Lin, Xin Lin, B. Palenik, 2017, The ISME Journal.

Species-dependent effects of seawater acidification on alkaline phosphatase activity in dinoflagellates

Senjie Lin, Xin Lin, Ling Li, 2022, bioRxiv.

Eukaryotic Plankton Community Assembly and Influencing Factors Between Continental Shelf and Slope Sites in the Northern South China Sea

Xin Lin, Jianwei Chen, Guilin Liu, 2022, bioRxiv.

DNA barcoding species in Alexandrium tamarense complex using ITS and proposing designation of five species.

Senjie Lin, Huan Zhang, Xin Lin, 2014, Harmful algae.

Diversity Distribution, Driving Factors and Assembly Mechanisms of Free-Living and Particle-Associated Bacterial Communities at a Subtropical Marginal Sea.

Senjie Lin, Xin Lin, Ling Li, 2021, Microorganisms.

SAGER: a database of Symbiodiniaceae and Algal Genomic Resource

Xin Lin, Ling Li, Liying Yu, 2020, Database J. Biol. Databases Curation.

One enzyme many faces: alkaline phosphatase-based phosphorus-nutrient strategies and the regulatory cascade revealed by CRISPR/Cas9 gene knockout

Senjie Lin, Xin Lin, Ling Li, 2020, bioRxiv.

Rhodopsin gene expression regulated by the light dark cycle, light spectrum and light intensity in the dinoflagellate Prorocentrum

Senjie Lin, Xin Lin, Mei-zhen Li, 2015, Front. Microbiol..

Biogenic phosphonate utilization by globally distributed diatom Thalassiosira

Xin Lin, Yuan Shen, Huilin Shu, 2023, bioRxiv.

The dynamic duo: how DNA methylation and gene transcription help diatoms thrive in modern oceans

L. Tirichine, Xin Lin, Xu Zhang, 2023, Journal of experimental botany.

Protocol: Chromatin immunoprecipitation (ChIP) methodology to investigate histone modifications in two model diatom species

C. Bowler, L. Tirichine, Xin Lin, 2012, Plant Methods.

Transcriptomic and microRNAomic profiling reveals multi-faceted mechanisms to cope with phosphate stress in a dinoflagellate

Senjie Lin, Xin Lin, B. Palenik, 2017, The ISME Journal.

RNA-seq profiling of Fugacium kawagutii reveals strong responses in metabolic processes and symbiosis potential to deficiencies of iron and other trace metals.

Senjie Lin, Xin Lin, Liying Yu, 2020, The Science of the total environment.

Diversity Distribution, Driving Factors and Assembly Mechanisms of Free-Living and Particle-Associated Bacterial Communities at a Subtropical Marginal Sea

Senjie Lin, Xin Lin, Ling Li, 2021, Microorganisms.