David Lewis

The Dilemma of Species Recognition in the Field When Sequence Data are not in Phase with Phenotypic Variability

B. Buyck, V. Hofstetter, I. Olariaga, 2016, Cryptogamie Mycologie.

Hypoxia shapes the immune landscape in lung injury and promotes the persistence of inflammation

J. Baillie, S. Forbes, P. Ratcliffe, 2022, Nature Immunology.

Hypoxia shapes the immune landscape in lung injury promoting inflammation persistence

S. Forbes, P. Ratcliffe, J. Schwarze, 2022, bioRxiv.

Low Cell Number Proteomic Analysis Using In-Cell Protease Digests Reveals a Robust Signature for Cell Cycle State Classification

T. Ly, David Lewis, G. Kustatscher, 2020, bioRxiv.

Cell cycle state proteomics and classification using in-cell protease digests and mass spectrometry

T. Ly, David Lewis, V. Kelly, 2020 .

Identification and correction of phase switches with Hi-C data in the Nanopore and HiFi chromosome-scale assemblies of the dikaryotic leaf rust fungus Puccinia triticina

David Lewis, B. Schwessinger, P. Dodds, 2021, bioRxiv.