I. Blaby

发表

The Path to Triacylglyceride Obesity in the sta6 Strain of Chlamydomonas reinhardtii

Matteo Pellegrini, Ian K. Blaby, Ian Blaby, 2014, Eukaryotic Cell.

Nitrogen-Sparing Mechanisms in Chlamydomonas Affect the Transcriptome, the Proteome, and Photosynthetic Metabolism[W]

Mark Stitt, Matteo Pellegrini, Timo Mühlhaus, 2014, Plant Cell.

ManiNetCluster: a novel manifold learning approach to reveal the functional links between gene networks

Ian K. Blaby, Nam D. Nguyen, I. Blaby, 2019, BMC Genomics.

Review of the algal biology program within the National Alliance for Advanced Biofuels and Bioproducts

Joshua S. Yuan, Ian K. Blaby, Shawn R. Starkenburg, 2017 .

Lawrence Berkeley National Laboratory Recent Work Title Deep Learning in Label-free Cell Classification

Ian K. Blaby, B. Jalali, I. Blaby, 2016 .

Towards a Systems Approach in the Genetic Analysis of Archaea: Accelerating Mutant Construction and Phenotypic Analysis in Haloferax volcanii

Ian K. Blaby, V. de Crécy-Lagard, Crysten E. Blaby-Haas, 2010, Archaea.

The archaeal COG1901/DUF358 SPOUT-methyltransferase members, together with pseudouridine synthase Pus10, catalyze the formation of 1-methylpseudouridine at position 54 of tRNA.

Ian K. Blaby, V. de Crécy-Lagard, I. Blaby, 2012, RNA.

The Chlamydomonas genome project: a decade on.

Ian K. Blaby, Erik F. Y. Hom, J. Grimwood, 2014, Trends in plant science.

Gene Expression Analysis by Arylsulfatase Assays in the Green Alga Chlamydomonas reinhardtii.

Crysten E. Blaby-Haas, I. Blaby, 2018, Methods in molecular biology.

Zng1 is a GTP-dependent zinc transferase needed for activation of methionine aminopeptidase.

Ian K. Blaby, K. Hixson, M. Lipton, 2022, Cell reports.

Sensitivity analysis of genome-scale metabolic flux prediction

Ian K. Blaby, Francis J. Alexander, Maria J. Soto, 2022, bioRxiv.

A roadmap for the functional annotation of protein families: a community perspective

Benjamin M. Gyori, Lucy J. Colwell, Ian K. Blaby, 2022, Database J. Biol. Databases Curation.

Structural characterization of a soil viral auxiliary metabolic gene encoding a functional chitosanase

Ian K. Blaby, N. Kyrpides, J. Jansson, 2022 .

High-Resolution Profiling of a Synchronized Diurnal Transcriptome from Chlamydomonas reinhardtii Reveals Continuous Cell and Metabolic Differentiation[OPEN]

Ian K. Blaby, S. Merchant, J. Umen, 2015, Plant Cell.

Genomics-driven Reconstruction of Acinetobacter NAD Metabolism

Ian K. Blaby, A. Osterman, S. Gerdes, 2010, The Journal of Biological Chemistry.

Synergistic use of plant-prokaryote comparative genomics for functional annotations

Andreas Wilke, Ross Overbeek, Ian K. Blaby, 2011, BMC Genomics.

Deep Learning in Label-free Cell Classification

Ata Mahjoubfar, Bahram Jalali, Ian K. Blaby, 2016, Scientific Reports.

Thermophile from a Mesophilic Ancestor Experimental Evolution of a Facultative

Ian K. Blaby, S. Benner, S. G. Chamberlin, 2014 .

Experimental Evolution of a Facultative Thermophile from a Mesophilic Ancestor

Ian K. Blaby, Steven A. Benner, S. Benner, 2011, Applied and Environmental Microbiology.

Three Acyltransferases and Nitrogen-responsive Regulator Are Implicated in Nitrogen Starvation-induced Triacylglycerol Accumulation in Chlamydomonas*

Ian K. Blaby, Nanette R. Boyle, M. Pellegrini, 2012, The Journal of Biological Chemistry.

Systems-Level Analysis of Nitrogen Starvation–Induced Modifications of Carbon Metabolism in a Chlamydomonas reinhardtii Starchless Mutant[W]

Mark Stitt, Matteo Pellegrini, Nanette R Boyle, 2013, Plant Cell.

Exploiting algal NADPH oxidase for biophotovoltaic energy

Ian K. Blaby, C. Howe, S. Merchant, 2015, Plant biotechnology journal.

Activation of Autophagy by Metals in Chlamydomonas reinhardtii

Ian K. Blaby, J. Crespo, Crysten E. Blaby-Haas, 2015, Eukaryotic Cell.

Plant single-cell solutions for energy and the environment

Ian K. Blaby, D. Dickel, A. Visel, 2021, Communications biology.

A Gateway platform for functional genomics in Haloferax volcanii: deletion of three tRNA modification genes.

Ian K. Blaby, V. de Crécy-Lagard, I. Blaby, 2009, Archaea.

TRIMER: Transcription Regulation Integrated with Metabolic Regulation

Ian K. Blaby, Francis J. Alexander, Maria J. Soto, 2021, bioRxiv.

Pseudouridine formation in archaeal RNAs: The case of Haloferax volcanii.

Ian K. Blaby, V. de Crécy-Lagard, I. Blaby, 2011, RNA.

Genomics and Functional Genomics in Chlamydomonas reinhardtii

Ian K. Blaby, Crysten E. Blaby-Haas, I. Blaby, 2017 .

Modes of Culture/Microbial

T. Lyons, V. Crécy-Lagard, I. Blaby, 2011 .

FolX and FolM Are Essential for Tetrahydromonapterin Synthesis in Escherichia coli and Pseudomonas aeruginosa

Ian K. Blaby, V. de Crécy-Lagard, J. Gregory, 2009, Journal of bacteriology.

Deciphering the Translation Initiation Factor 5A Modification Pathway in Halophilic Archaea

Ian K. Blaby, Daniel N. Wilson, V. de Crécy-Lagard, 2016, Archaea.

Quinolinate Salvage and Insights for Targeting NAD Biosynthesis in Group A Streptococci

Ian K. Blaby, V. de Crécy-Lagard, A. Osterman, 2012, Journal of bacteriology.

A 5-formyltetrahydrofolate cycloligase paralog from all domains of life: comparative genomic and experimental evidence for a cryptic role in thiamin metabolism

Ian K. Blaby, J. Gregory, A. Hanson, 2011, Functional & Integrative Genomics.

Bacterial genome editing by coupling Cre-lox and CRISPR-Cas9 systems

Ian K. Blaby, Yasuo Yoshikuni, Hualan Liu, 2020, PloS one.

A mutational analysis of the ColE1-encoded cell cycle regulator Rcd confirms its role in plasmid stability.

Ian K. Blaby, I. Blaby, D. Summers, 2006, Plasmid.

A role for tetrahydrofolates in the metabolism of iron-sulfur clusters in all domains of life

Ian K. Blaby, V. de Crécy-Lagard, T. Vickers, 2010, Proceedings of the National Academy of Sciences.

Building a custom high-throughput platform at the Joint Genome Institute for DNA construct design and assembly-present and future challenges.

Ian K. Blaby, Ian K Blaby, Jan Fang Cheng, 2020, Synthetic biology.

Genome-wide analysis on Chlamydomonas reinhardtii reveals the impact of hydrogen peroxide on protein stress responses and overlap with other stress transcriptomes.

Ian K. Blaby, Crysten E. Blaby-Haas, S. Merchant, 2015, The Plant journal : for cell and molecular biology.

Multimodal biological analysis using NLP and expression profile

Shinjae Yoo, Ian K. Blaby, Peggy Yin, 2018, 2018 New York Scientific Data Summit (NYSDS).

ManiNetCluster: A Manifold Learning Approach to Reveal the Functional Linkages Across Multiple Gene Networks

Nam Nguyen, Daifeng Wang, Ian K. Blaby, 2018, bioRxiv.

Extracting Protein-Protein Interactions (PPIs) from Biomedical Literature using Attention-based Relational Context Information

Gilchan Park, S. McCorkle, I. Blaby, 2022, 2022 IEEE International Conference on Big Data (Big Data).