Tobias Neumann

发表

Thiol-linked alkylation of RNA to assess expression dynamics

Johannes Zuber, Philipp Rescheneder, Tobias Neumann, 2017, Nature Methods.

Transcriptional plasticity promotes primary and acquired resistance to BET inhibition

Łukasz M. Boryń, J. Zuber, A. Stark, 2015, Nature.

The First Myriapod Genome Sequence Reveals Conservative Arthropod Gene Content and Genome Organisation in the Centipede Strigamia maritima

Galina A. Erikson, Peshtewani K. Aqrawi, Adelaide C. Rhodes, 2014, PLoS biology.

SLAM-seq defines direct gene-regulatory functions of the BRD4-MYC axis

Jesse J. Lipp, Johannes Zuber, Philipp Rescheneder, 2018, Science.

Cohesin-Dependent and -Independent Mechanisms Mediate Chromosomal Contacts between Promoters and Enhancers

J. Peters, J. Zuber, P. Fraser, 2020, Cell reports.

Cohesin-dependent and independent mechanisms support chromosomal contacts between promoters and enhancers

J. Peters, J. Zuber, P. Fraser, 2020, bioRxiv.

LSD1 inhibitors induce neuronal differentiation of Merkel cell carcinoma by disrupting the LSD1-CoREST complex and activating TGFβ signaling

Tobias Neumann, A. Obenauf, T. Wiesner, 2020, bioRxiv.

LSD1 inhibition induces differentiation and cell death in Merkel cell carcinoma

K. Mechtler, A. Schleiffer, Tobias Neumann, 2020, EMBO molecular medicine.

Canonical NF-κB signaling in myeloid cells promotes lung metastasis in a mouse breast cancer model

F. Greten, Tobias Neumann, Ö. Canlı, 2018, Oncotarget.

Thiol-linked alkylation for the metabolic sequencing of RNA

Veronika A. Herzog, Stefan L Ameres, A. von Haeseler, 2017, bioRxiv.

Multilayered VBC score predicts sgRNAs that efficiently generate loss-of-function alleles

J. Zuber, A. Schleiffer, Tobias Neumann, 2020, Nature Methods.

The genomic basis of circadian and circalunar timing adaptations in a midge

A. von Haeseler, T. Hummel, S. Dorner, 2016, Nature.

Somatic Hypermutation Spectra Are Independent of the Local Transcriptional and Epigenetic Landscape

Rushad Pavri, H. Mouquet, Tobias Neumann, 2022, SSRN Electronic Journal.

Isolating live cell clones from barcoded populations using CRISPRa-inducible reporters

Jesse J. Lipp, J. Zuber, Tobias Neumann, 2020, Nature Biotechnology.

Sequencing cell-type-specific transcriptomes with SLAM-ITseq

Veronika A. Herzog, Stefan L Ameres, E. Miska, 2019, Nature Protocols.

DNA replication timing directly regulates the frequency of oncogenic chromosomal translocations

Rushad Pavri, Tobias Neumann, U. Schoeberl, 2021, bioRxiv.

AKIRIN2 controls the nuclear import of proteasomes in vertebrates

J. Zuber, K. Mechtler, D. Haselbach, 2021, Nature.

Myeloid Cell-Derived Reactive Oxygen Species Induce Epithelial Mutagenesis.

U. Şahin, F. Greten, Tobias Neumann, 2017, Cancer cell.

Regulation of RNA polymerase II processivity by Spt5 is restricted to a narrow window during elongation

Rushad Pavri, Tobias Neumann, J. Fitz, 2018, The EMBO journal.

Spt5-mediated enhancer transcription directly couples enhancer activation with physical promoter interaction

Rushad Pavri, Tobias Neumann, U. Schoeberl, 2020, Nature Genetics.

SLAM-ITseq: sequencing cell type-specific transcriptomes without cell sorting

Veronika A. Herzog, Stefan L Ameres, E. Miska, 2017, Development.

Human Papillomavirus 42 Drives Digital Papillary Adenocarcinoma and Elicits a Germ Cell–like Program Conserved in HPV-Positive Cancers

K. Mechtler, L. Cerroni, F. Stubenrauch, 2022, Cancer discovery.

Multiplexed detection of SARS-CoV-2 and other respiratory infections in high throughput by SARSeq

Stefan L Ameres, P. Hufnagl, J. Peters, 2021, Nature Communications.

Spt5-mediated enhancer transcription directly couples enhancer activation with physical promoter interaction

Rushad Pavri, Tobias Neumann, U. Schoeberl, 2020, Nature Genetics.

Quantification of experimentally induced nucleotide conversions in high-throughput sequencing datasets

Veronika A. Herzog, Stefan L Ameres, J. Zuber, 2019, BMC Bioinform..

Multilayered VBC score predicts sgRNAs that efficiently generate loss-of-function alleles

J. Zuber, A. Schleiffer, Tobias Neumann, 2020, Nature Methods.

Acquired resistance to anti-MAPK targeted therapy confers an immune-evasive tumour microenvironment and cross-resistance to immunotherapy in melanoma

J. Zuber, S. Vanharanta, K. Harrington, 2021, Nature Cancer.

Isolating live cell clones from barcoded populations using CRISPRa-inducible reporters

J. Zuber, Tobias Neumann, T. Burkard, 2020, Nature Biotechnology.

RIF1 regulates replication origin activity and early replication timing in B cells

Kyle N. Klein, Rushad Pavri, Tobias Neumann, 2023, bioRxiv.

Somatic hypermutation patterns in immunoglobulin variable regions are established independently of the local transcriptional landscape

Rushad Pavri, H. Mouquet, Tobias Neumann, 2023, bioRxiv.

Quantification of experimentally induced nucleotide conversions in high-throughput sequencing datasets

Arndt von Haeseler, Johannes Zuber, Philipp Rescheneder, 2019, BMC Bioinformatics.

EVI1 drives leukemogenesis through aberrant ERG activation.

J. Zuber, L. Smeenk, Tobias Neumann, 2022, Blood.

RIF1 regulates early replication timing in murine B cells

Kyle N. Klein, Rushad Pavri, M. Di Virgilio, 2023, Nature communications.