Lei Yang

发表

Identification of novel prognostic indicators for triple-negative breast cancer patients through integrative analysis of cancer genomics data and protein interactome data

Junwei Han, Fei Su, E. Sobie, 2016, Oncotarget.

Molecular classification of prostate adenocarcinoma by the integrated somatic mutation profiles and molecular network

Xiaowen Chen, Wei Jiang, Yongchun Zuo, 2017, Scientific Reports.

Predicting peroxidase subcellular location by hybridizing different descriptors of Chou' pseudo amino acid patterns.

Wei Chen, Yongchun Zuo, Guo-Liang Fan, 2014, Analytical biochemistry.

EmExplorer: a database for exploring time activation of gene expression in mammalian embryos

Yongchun Zuo, Lei Yang, Bosu Hu, 2019, Open Biology.

Discovery of potential prognostic long non-coding RNA biomarkers for predicting the risk of tumor recurrence of breast cancer patients

Hengqiang Zhao, Lei Yang, Meng Zhou, 2016, Scientific Reports.

Prediction of presynaptic and postsynaptic neurotoxins by combining various Chou’s pseudo components

Lei Yang, Yingli Lv, Yongchun Zuo, 2017, Scientific Reports.

Identification and validation of potential prognostic lncRNA biomarkers for predicting survival in patients with multiple myeloma

Lei Yang, Haixiu Yang, Liang Cheng, 2015, Journal of Experimental & Clinical Cancer Research.

Characterize the relationship between essential and TATA-containing genes for S. cerevisiae by network topologies in the perturbation sensitivity network.

Lei Yang, Yingli Lv, Yongchun Zuo, 2016, Genomics.

Characterization of BioPlex network by topological properties.

Xiaowen Chen, Yongchun Zuo, Lei Yang, 2016, Journal of theoretical biology.

Characterization of the relationship between FLI1 and immune infiltrate level in tumour immune microenvironment for breast cancer

Yongchun Zuo, Lei Yang, Shiyuan Wang, 2020, Journal of cellular and molecular medicine.

Analysis and prediction of animal toxins by various Chou's pseudo components and reduced amino acid compositions.

Lei Yang, Yongchun Zuo, Shiyuan Wang, 2019, Journal of theoretical biology.

Identifying FL11 subtype by characterizing tumor immune microenvironment in prostate adenocarcinoma via Chou's 5-steps rule.

Yongchun Zuo, Lei Yang, Shiyuan Wang, 2020, Genomics.

The spatial binding model of the pioneer factor Oct4 with its target genes during cell reprogramming

Lei Yang, Yongchun Zuo, Chunshen Long, 2019, Computational and structural biotechnology journal.

Characterize the difference between TMPRSS2-ERG and non-TMPRSS2-ERG fusion patients by clinical and biological characteristics in prostate cancer.

Xiaowen Chen, Yongchun Zuo, Lei Yang, 2018, Gene.

Characterization of proteins in S. cerevisiae with subcellular localizations.

Wei Jiang, Yongchun Zuo, Lei Yang, 2015, Molecular bioSystems.

Characterization of TATA-containing genes and TATA-less genes in S. cerevisiae by network topologies and biological properties.

Wei Jiang, Yongchun Zuo, Lei Yang, 2014, Genomics.

Analysis and identification of essential genes in humans using topological properties and biological information.

Wei Jiang, Yongchun Zuo, Lei Yang, 2014, Gene.

Deep learning-based transcription factor activity for stratification of breast cancer patients.

Yongchun Zuo, Lei Yang, Shiyuan Wang, 2022, Biochimica et biophysica acta. Gene regulatory mechanisms.

Characterization of proteins in different subcellular localizations for Escherichia coli K12.

Yongchun Zuo, Lei Yang, Shiyuan Wang, 2019, Genomics.

Characterization of human proteins with different subcellular localizations by topological and biological properties.

Yongchun Zuo, Lei Yang, Shiyuan Wang, 2019, Genomics.

Genome-wide characterization of essential, toxicity-modulating and no-phenotype genes in S. cerevisiae.

Wei Jiang, Yongchun Zuo, Lei Yang, 2015, Gene.

Propofol inhibited the delayed rectifier potassium current (I(k)) via activation of protein kinase C epsilon in rat parietal cortical neurons.

Lei Yang, Wen-zhi Li, Wei Gao, 2011, European journal of pharmacology.

Comparative analysis of housekeeping and tissue-selective genes in human based on network topologies and biological properties

Xiaowen Chen, Yongchun Zuo, Lei Yang, 2016, Molecular Genetics and Genomics.

Berberine Hydrochloride Prevents Postsurgery Intestinal Adhesion and Inflammation in Rats

Chaoqian Xu, Yanjie Lu, Baofeng Yang, 2014, The Journal of Pharmacology and Experimental Therapeutics.

The expression of miRNAs is associated with tumour genome instability and predicts the outcome of ovarian cancer patients treated with platinum agents

Lei Yang, D. Hao, Di Wu, 2017, Scientific Reports.

Comparative analysis of housekeeping and tissue-selective genes in human based on network topologies and biological properties

Lei Yang, Yingli Lv, Yongchun Zuo, 2016, Molecular Genetics and Genomics.

A Comparison for Dimensionality Reduction Methods of Single-Cell RNA-seq Data

Xiaowen Chen, Lei Yang, Chaohan Xu, 2021, Frontiers in Genetics.

let-7e replacement yields potent anti-arrhythmic efficacy via targeting beta 1-adrenergic receptor in rat heart

Chaoqian Xu, Yanjie Lu, W. Chu, 2014, Journal of cellular and molecular medicine.

Identification of associations between small molecule drugs and miRNAs based on functional similarity

Jing Wang, Lei Yang, Wei Jiang, 2016, Oncotarget.

Dissection of human MiRNA regulatory influence to subpathway

Wei Li, Lei Yang, Xia Li, 2012, Briefings Bioinform..

Synergistic Transcriptional and Post-Transcriptional Regulation of ESC Characteristics by Core Pluripotency Transcription Factors in Protein-Protein Interaction Networks

Mingzhi Liao, Lei Yang, Yongshuai Jiang, 2014, PloS one.

Identification and validation of potential prognostic lncRNA biomarkers for predicting survival in patients with multiple myeloma

Haixiu Yang, Liang Cheng, Hongbo Shi, 2015, Journal of experimental & clinical cancer research : CR.

Clinical significance of the immune microenvironment in ovarian cancer patients.

Xiaowen Chen, Yongchun Zuo, Lei Yang, 2018, Molecular omics.

Predicting human microRNA precursors based on an optimized feature subset generated by GA-SVM.

Mingzhi Liao, Lei Yang, Yingli Lv, 2011, Genomics.

Characterization of long non-coding RNA-associated ceRNA network to reveal potential prognostic lncRNA biomarkers in human ovarian cancer

Lei Yang, Liang Cheng, Hengqiang Zhao, 2016, Oncotarget.

HelPredictor models single-cell transcriptome to predict human embryo lineage allocation

Lei Yang, Wuritu Yang, Yongchun Zuo, 2021, Briefings Bioinform..

RAACBook: a web server of reduced amino acid alphabet for sequence-dependent inference by using Chou’s five-step rule

Yu Chang, Lei Zheng, Shenghui Huang, 2019, Database J. Biol. Databases Curation.

Large-scale identification of adverse drug reaction-related proteins through a random walk model

Hongbo Shi, Lei Yang, Wei Jiang, 2016, Scientific Reports.

Discrimination of membrane transporter protein types using K-nearest neighbor method derived from the similarity distance of total diversity measure.

Lei Yang, Wen-Xia Su, Cheng-Yan Wu, 2015, Molecular bioSystems.

Clinical significance and immunogenomic landscape analyses of the immune cell signature based prognostic model for patients with breast cancer

Yongchun Zuo, Lei Yang, Shiyuan Wang, 2020, Briefings Bioinform..

Immune cell infiltration-based signature for prognosis and immunogenomic analysis in breast cancer

Lei Yang, Yongchun Zuo, Shiyuan Wang, 2020, Briefings Bioinform..

Human proteins characterization with subcellular localizations.

Lei Yang, Wei Jiang, Yingli Lv, 2014, Journal of theoretical biology.

Downregulation of miR-151-5p Contributes to Increased Susceptibility to Arrhythmogenesis during Myocardial Infarction with Estrogen Deprivation

Yanjie Lu, Zhenwei Pan, H. Shan, 2013, PloS one.

Effects of PKC on inhibition of delayed rectifier potassium currents by N/OFQ.

Lei Yang, Hua Tian, Zhigang Wang, 2007, Biochemical and biophysical research communications.

Identifying novel associations between small molecules and miRNAs based on integrated molecular networks

Jing Wang, Lei Yang, Xia Li, 2015, Bioinform..

iDEF-PseRAAC: Identifying the Defensin Peptide by Using Reduced Amino Acid Composition Descriptor

Lei Yang, Yongchun Zuo, Lei Zheng, 2019, Evolutionary bioinformatics online.

Five miRNAs Considered as Molecular Targets for Predicting Esophageal Cancer

Wei Wang, Lei Yang, Yi Li, 2015, Medical science monitor : international medical journal of experimental and clinical research.

Prediction of presynaptic and postsynaptic neurotoxins by combining various Chou’s pseudo components

Yongchun Zuo, Lei Yang, Shiyuan Wang, 2017, Scientific Reports.

Using reduced amino acid alphabet and biological properties to analyze and predict animal neurotoxin protein.

Yongchun Zuo, Lei Yang, Shiyuan Wang, 2020, Current drug metabolism.

A computational framework of routine test data for the cost-effective chronic disease prediction

Yongchun Zuo, Lei Yang, Pengfei Liang, 2023, Briefings Bioinform..

Molecular classification of prostate adenocarcinoma by the integrated somatic mutation profiles and molecular network

Xiaowen Chen, Wei Jiang, Yongchun Zuo, 2017, Scientific Reports.

Integrated analysis of ovarian cancer patients from prospective transcription factor activity reveals subtypes of prognostic significance

Yongchun Zuo, Lei Yang, Shiyuan Wang, 2023, Heliyon.

Stratification of ovarian cancer patients from the prospect of drug target-related transcription factor protein activity: the prognostic and genomic landscape analyses.

Tao Wang, Yongchun Zuo, Lei Yang, 2023, Briefings in functional genomics.

RaacLogo: a new sequence logo generator by using reduced amino acid clusters

Lei Yang, Wuritu Yang, Yongchun Zuo, 2020, Briefings Bioinform..

System Analysis of LWDH Related Genes Based on Text Mining in Biological Networks

Yang Wang, Mingzhi Liao, Lei Yang, 2014, BioMed research international.

Effect of miR-483-5p on apoptosis of lung cancer cells through targeting of RBM5.

Lei Yang, Maomao Zhang, Yi Li, 2018, International journal of clinical and experimental pathology.

Identifying novel associations between small molecules and miRNAs based on integrated molecular networks

Xiaowen Chen, Jing Wang, Wei Jiang, 2015, Bioinform..

Characterization of essential genes by topological properties in the perturbation sensitivity network.

Lei Yang, Wei Jiang, Yingli Lv, 2014, Biochemical and biophysical research communications.

Analysis and identification of toxin targets by topological properties in protein-protein interaction network.

Huiping Wang, Lei Yang, Wei Jiang, 2014, Journal of theoretical biology.

Structural deep clustering network for stratification of breast cancer patients through integration of somatic mutation profiles

Yongchun Zuo, Lei Yang, Shiyuan Wang, 2023, Comput. Methods Programs Biomed..

Characterized the diversity of ABCB1 subtypes in immunogenomic landscape for predicting the drug response in breast cancer.

Yongchun Zuo, Lei Yang, Shiyuan Wang, 2022, Methods.

Prediction of conotoxin superfamilies by the Naive Bayes classifier

Lei Yang, Haiyan Huo, Lei Yang, 2017, 2017 10th International Congress on Image and Signal Processing, BioMedical Engineering and Informatics (CISP-BMEI).

Differential whole-genome doubling based signatures for improvement on clinical outcomes and drug response in patients with breast cancer

Hongbo Shi, Lei Yang, Chaohan Xu, 2024, Heliyon.

Integrating somatic mutation profiles with structural deep clustering network for metabolic stratification in pancreatic cancer: a comprehensive analysis of prognostic and genomic landscapes

Yongchun Zuo, Lei Yang, Shiyuan Wang, 2023, Briefings Bioinform..