Jianrong Li

发表

Integrative genomics analyses unveil downstream biological effectors of disease-specific polymorphisms buried in intergenic regions

Lorenzo L. Pesce, Jason H. Moore, J. Denny, 2016, npj Genomic Medicine.

Evaluation of an Ontology-anchored Natural Language-based Approach for Asserting Multi-scale Biomolecular Networks for Systems Medicine

Matthew G. Crowson, C. Friedman, Y. Lussier, 2010, Summit on translational bioinformatics.

Identifying clinically disruptive International Classification of Diseases 10th Revision Clinical Modification conversions to mitigate financial costs using an online tool.

Yves A Lussier, Andrew D Boyd, Neeta K Venepalli, 2014, Journal of oncology practice.

The complexity and challenges of the International Classification of Diseases, Ninth Revision, Clinical Modification to International Classification of Diseases, 10th Revision, Clinical Modification transition in EDs.

Yves A. Lussier, Andrew D. Boyd, Jacob Krive, 2015, The American journal of emergency medicine.

Curation-free biomodules mechanisms in prostate cancer predict recurrent disease

Y. Lussier, X. Yang, Haiquan Li, 2013, BMC Medical Genomics.

Deregulation of a Hox Protein Regulatory Network Spanning Prostate Cancer Initiation and Progression

Y. Lussier, T. Antic, Jianrong Li, 2012, Clinical Cancer Research.

Novel disease syndromes unveiled by integrative multiscale network analysis of diseases sharing molecular effectors and comorbidities

Pradeep C. Koripella, E. Bedrick, Jiali Han, 2018, BMC Medical Genomics.

Simulation of ICD-9 to ICD-10-CM Transition for Family Medicine: Simple or Convoluted?

Mike D. Burton, L. Green, Y. Lussier, 2016, The Journal of the American Board of Family Medicine.

Potential utility of miRNAs for liquid biopsy in breast cancer

Yan Liu, Zhixiang Wang, Jianrong Li, 2022, Frontiers in Oncology.

‘N-of-1-pathways’ unveils personal deregulated mechanisms from a single pair of RNA-Seq samples: towards precision medicine

Ian T. Foster, Neil Bahroos, Yves A. Lussier, 2014, J. Am. Medical Informatics Assoc..

Rhinovirus Infections in Individuals with Asthma Increase ACE2 Expression and Cytokine Pathways Implicated in COVID-19

D. Cusanovich, Y. Lussier, N. Pouladi, 2020, American journal of respiratory and critical care medicine.

Genome-wide interaction analysis identified low-frequency variants with sex disparity in lung cancer risk

Kristen S Purrington, Y. Bossé, Hongbing Shen, 2021, Human molecular genetics.

Novel disease syndromes unveiled by integrative multiscale network analysis of diseases sharing molecular effectors and comorbidities

Pradeep C. Koripella, E. Bedrick, Jiali Han, 2018, BMC Medical Genomics.

Convergent downstream candidate mechanisms of independent intergenic polymorphisms between co-classified diseases implicate epistasis among noncoding elements§

Ian T. Foster, Yves A. Lussier, Jianrong Li, 2017, PSB.

Complex-disease networks of trait-associated single-nucleotide polymorphisms (SNPs) unveiled by information theory

Yves A. Lussier, Jianrong Li, Haiquan Li, 2012, J. Am. Medical Informatics Assoc..

Protein interaction network underpins concordant prognosis among heterogeneous breast cancer signatures

Yves A. Lussier, Jianrong Li, Younghee Lee, 2010, J. Biomed. Informatics.

eQTL networks unveil enriched mRNA master integrators downstream of complex disease-associated SNPs

Yves A. Lussier, Jianrong Li, Haiquan Li, 2015, J. Biomed. Informatics.

Network Modeling Identifies Molecular Functions Targeted by miR-204 to Suppress Head and Neck Tumor Metastasis

Mark Gerstein, Yong Huang, Yves A. Lussier, 2010, PLoS Comput. Biol..

Protein-network modeling of prostate cancer gene signatures reveals essential pathways in disease recurrence

Yves A. Lussier, Jianrong Li, James L. Chen, 2011, J. Am. Medical Informatics Assoc..

Network models of genome-wide association studies uncover the topological centrality of protein interactions in complex diseases

Yves A. Lussier, Jianrong Li, Haiquan Li, 2013, J. Am. Medical Informatics Assoc..

PhenoGO: an integrated resource for the multiscale mining of clinical and biological data

Carol Friedman, Judith A. Blake, Eneida A. Mendonça, 2009, BMC Bioinformatics.

Evaluation of high-throughput functional categorization of human disease genes

Yves A. Lussier, Jianrong Li, James L. Chen, 2007, BMC Bioinformatics.

Translating Mendelian and complex inheritance of Alzheimer's disease genes for predicting unique personal genome variants

Yves A. Lussier, Jianrong Li, Haiquan Li, 2012, J. Am. Medical Informatics Assoc..

Terminological Mapping for High Throughput Comparative Biology of Phenotypes

Yves A. Lussier, Jianrong Li, Y. Lussier, 2003, Pacific Symposium on Biocomputing.

GO-Module: functional synthesis and improved interpretation of Gene Ontology patterns

Yves A. Lussier, Jianrong Li, Younghee Lee, 2011, Bioinform..

Single Sample Expression-Anchored Mechanisms Predict Survival in Head and Neck Cancer

Yong Huang, Yves A. Lussier, Jianrong Li, 2012, PLoS Comput. Biol..

1 Title : Deregulation of a Hox Protein Regulatory Network Spanning Prostate Cancer Initiation and Progression

Y. Lussier, T. Antic, Jianrong Li, 2012 .

Genetic Interactions between Chromosomes 11 and 18 Contribute to Airway Hyperresponsiveness in Mice

Yves A. Lussier, Jianrong Li, Xinan Yang, 2012, PloS one.

Integration of curated databases to identify genotype-phenotype associations

Mark Gerstein, Yang Liu, Jianrong Li, 2006, BMC Genomics.

Information theory applied to the sparse gene ontology annotation network to predict novel gene function

Carol Friedman, Ying Tao, Yves A. Lussier, 2007, ISMB/ECCB.

Microbes Are Associated with Host Innate Immune Response in Idiopathic Pulmonary Fibrosis

Yves A. Lussier, Jianrong Li, Naftali Kaminski, 2017, American journal of respiratory and critical care medicine.

Physician nurse care: A new use of UMLS to measure professional contribution

Sabita Acharya, Barbara Di Eugenio, Camillo Lugaresi, 2018, Int. J. Medical Informatics.

Integration of Neuroimaging and Microarray Datasets through Mapping and Model-Theoretic Semantic Decomposition of Unstructured Phenotypes

Yves A. Lussier, Paul Pavlidis, Spiro P. Pantazatos, 2009, Summit on translational bioinformatics.

A genome-by-environment interaction classifier for precision medicine: personal transcriptome response to rhinovirus identifies children prone to asthma exacerbations

Yves A. Lussier, Jianrong Li, Haiquan Li, 2017, J. Am. Medical Informatics Assoc..

Information-Theoretic Classification of SNOMED Improves the Organization of Context-Sensitive Excerpts from Cochrane Reviews

Carol Friedman, Barry Smith, Ying Tao, 2007, AMIA.

Towards a PBMC "virogram assay" for precision medicine: Concordance between ex vivo and in vivo viral infection transcriptomes

Yves A. Lussier, Jianrong Li, Vincent Gardeux, 2015, J. Biomed. Informatics.

PatientNarr: Towards generating patient-centric summaries of hospital stays

Barbara Di Eugenio, Camillo Lugaresi, Gail M. Keenan, 2014, INLG.

Discovery of Protein Interaction Networks Shared by Diseases

Carol Friedman, Yves A. Lussier, Jianrong Li, 2006, Pacific Symposium on Biocomputing.

The discriminatory cost of ICD-10-CM transition between clinical specialties: metrics, case study, and mitigating tools

Neil Bahroos, Yves A. Lussier, Jianrong Li, 2013, J. Am. Medical Informatics Assoc..

An Integrative Genomic Approach to Uncover Molecular Mechanisms of Prokaryotic Traits

Mark Gerstein, Yves A. Lussier, Jianrong Li, 2006, PLoS Comput. Biol..

Precision drug repurposing via convergent eQTL-based molecules and pathway targeting independent disease-associated polymorphisms

Yves A. Lussier, Haiquan Li, Joanne Berghout, 2018, PSB.

Research and applications: The discriminatory cost of ICD-10-CM transition between clinical specialties: metrics, case study, and mitigating tools

Mike D. Burton, Y. Lussier, V. Gardeux, 2013, J. Am. Medical Informatics Assoc..

ICD-10 procedure codes produce transition challenges

Yves A. Lussier, Mike D. Burton, Andrew D. Boyd, 2018, AMIA Joint Summits on Translational Science proceedings. AMIA Joint Summits on Translational Science.

Metrics and tools for consistent cohort discovery and financial analyses post-transition to ICD-10-CM

Neil Bahroos, Yves A. Lussier, Jianrong Li, 2015, J. Am. Medical Informatics Assoc..

Challenges and remediation for Patient Safety Indicators in the transition to ICD-10-CM

Yves A. Lussier, Jianrong Li, Mike D. Burton, 2014, J. Am. Medical Informatics Assoc..

Integration of Curated Databases to Identify Genotype-phenotype Associations

M. Gerstein, Alberto Paccanaro, T. Gianoulis, 2006 .

Robust methods for accurate diagnosis using pan-microbiological oligonucleotide microarrays

Yves A. Lussier, Jianrong Li, Lee T. Sam, 2009, BMC Bioinformatics.

COPD Hospitalization Risk Increased with Distinct Patterns of Multiple Systems Comorbidities Unveiled by Network Modeling

Yves A. Lussier, Jianrong Li, Andrew D. Boyd, 2014, AMIA.

Network models of genome-wide association studies uncover the topological centrality of protein interactions in complex diseases

E. Gamazon, Y. Lussier, X. Yang, 2013, J. Am. Medical Informatics Assoc..

Biomolecular Systems of Disease Buried Across Multiple GWAS Unveiled by Information Theory and Ontology

Yves A. Lussier, Jianrong Li, Nancy J. Cox, 2010, Summit on translational bioinformatics.

Semantic Modeling for Exposomics with Exploratory Evaluation in Clinical Context

Yves A Lussier, Jianrong Li, Jung-Wei Fan, 2017, Journal of healthcare engineering.

The discriminatory cost of ICD-10-CM transition between clinical specialties: metrics, case study, and mitigating tools

Mike D. Burton, I. Achour, Jianrong Li, 2013, Journal of the American Medical Informatics Association : JAMIA.

Protein interaction network underpins concordant prognosis among heterogeneous breast cancer signatures

Yang Liu, Jianrong Li, Younghee Lee, 2010, J. Biomed. Informatics.

Kinase inhibition-related adverse events predicted from in vitro kinome and clinical trial data

Yong Huang, Yves A. Lussier, Jianrong Li, 2010, J. Biomed. Informatics.

Network models of genome-wide association studies uncover the topological centrality of protein interactions in complex diseases

E. Gamazon, Y. Lussier, X. Yang, 2013, J. Am. Medical Informatics Assoc..

Epithelial cell responses to rhinovirus identify an early-life-onset asthma phenotype in adults.

Y. Lussier, N. Pouladi, S. Guerra, 2022, The Journal of allergy and clinical immunology.