K. Virtaneva

发表

Host-microbe interaction systems biology: lifecycle transcriptomics and comparative genomics.

R. Heinzen, D. Greenberg, D. Sturdevant, 2010, Future microbiology.

Expression profiling reveals fundamental biological differences in acute myeloid leukemia with isolated trisomy 8 and normal cytogenetics.

M. Caligiuri, C. Bloomfield, F. Wright, 2001, Proceedings of the National Academy of Sciences of the United States of America.

Transcriptome analysis identifies Bacillus anthracis genes that respond to CO2 through an AtxA-dependent mechanism

S. Leppla, S. Anzick, S. Ricklefs, 2014, BMC Genomics.

Increased circulation time of Plasmodium falciparum underlies persistent asymptomatic infection in the dry season

Peter D. Crompton, Joana S. Martins, M. Llinás, 2020, Nature Medicine.

Exposure-Dependent Control of Malaria-Induced Inflammation in Children

Peter D. Crompton, O. Doumbo, J. Skinner, 2014, PLoS pathogens.

In Vivo Interactions of Ecotropic and Polytropic Murine Leukemia Viruses in Mixed Retrovirus Infections

K. Virtaneva, S. Robertson, L. Evans, 2006, Journal of Virology.

Unstable minisatellite expansion causing recessively inherited myoclonus epilepsy, EPM1

Len A. Pennacchio, Ralf Krahe, Silvana Franceschetti, 1997, Nature Genetics.

Group A Streptococcus Gene Expression in Humans and Cynomolgus Macaques with Acute Pharyngitis

J. Musser, M. Graham, E. Graviss, 2003, Infection and Immunity.

Adaptive response of Yersinia pestis to extracellular effectors of innate immunity during bubonic plague.

Roberto Rebeil, B. J. Hinnebusch, D. Sturdevant, 2006, Proceedings of the National Academy of Sciences of the United States of America.

Comparative Pathogenesis of Three Human and Zoonotic SARS-CoV Strains in Cynomolgus Macaques

R. Baric, H. Feldmann, D. Sturdevant, 2011, PloS one.

Longitudinal analysis of the group A Streptococcus transcriptome in experimental pharyngitis in cynomolgus macaques.

J. Musser, M. Graham, I. Babar, 2005, Proceedings of the National Academy of Sciences of the United States of America.

Genome Sequence Analysis of the Emerging Human Pathogenic Acetic Acid Bacterium Granulibacter bethesdensis

S. Holland, D. Greenberg, D. Sturdevant, 2007, Journal of bacteriology.

Virulence control in group A Streptococcus by a two-component gene regulatory system: Global expression profiling and in vivo infection modeling

J. Musser, M. Graham, M. Federle, 2002, Proceedings of the National Academy of Sciences of the United States of America.

Genome-wide protective response used by group A Streptococcus to evade destruction by human polymorphonuclear leukocytes

J. Musser, B. Lei, D. Sturdevant, 2003, Proceedings of the National Academy of Sciences of the United States of America.

Acute Pharyngitis Humans and Cynomolgus Macaques with Gene Expression in Streptococcus Group A

J. Musser, M. Graham, E. Graviss, 2003 .

Chlamydia trachomatis Plasmid-Encoded Pgp4 Is a Transcriptional Regulator of Virulence-Associated Genes

H. Caldwell, D. Sturdevant, S. Porcella, 2013, Infection and Immunity.

Mutations in the Gene Encoding Cystatin B in Progressive Myoclonus Epilepsy (EPM1)

Len A. Pennacchio, David R. Cox, Malek Faham, 1996, Science.

Genome Sequence Analysis of the Emerging Human Pathogenic Acetic Acid Bacterium Granulibacter bethesdensis (cid:1) †

S. Holland, D. Greenberg, D. Sturdevant, 2007 .

Imbalanced immune response and dysregulation of neural functions underline fatal opportunistic encephalitis caused by astrovirus

K. Wollenberg, A. Nath, M. Weller, 2022, bioRxiv.

A toxin-antitoxin system ensures plasmid stability in Coxiella burnetii

R. Heinzen, K. Virtaneva, Kishore Kanakabandi, 2022, bioRxiv.

Plasmodium falciparum increased time in circulation underlies persistent asymptomatic infection in the dry season

Peter D. Crompton, Winkler, M. Llinás, 2020 .

BMX, a novel nonreceptor tyrosine kinase gene of the BTK/ITK/TEC/TXK family located in chromosome Xp22.2.

C. Larsson, K. Alitalo, C. I. Smith, 1994, Oncogene.

Plasmid-mediated transformation tropism of chlamydial biovars.

H. Caldwell, S. Porcella, K. Virtaneva, 2014, Pathogens and disease.

Interactome analysis of longitudinal pharyngeal infection of cynomolgus macaques by group A Streptococcus

F. Wright, W. Barry, J. Musser, 2010, Proceedings of the National Academy of Sciences.

The Chlamydia trachomatis Plasmid Is a Transcriptional Regulator of Chromosomal Genes and a Virulence Factor

R. Heinzen, D. Crane, H. Caldwell, 2008, Infection and Immunity.

Recurrent Granulibacter bethesdensis Infections and Chronic Granulomatous Disease

S. Holland, P. Murray, D. Greenberg, 2010, Emerging infectious diseases.

Genetic Diversity of the Q Fever Agent, Coxiella burnetii, Assessed by Microarray-Based Whole-Genome Comparisons

R. Heinzen, J. Samuel, S. Porcella, 2006, Journal of bacteriology.

Host cell-free growth of the Q fever bacterium Coxiella burnetii

R. Heinzen, E. Fischer, D. Sturdevant, 2009, Proceedings of the National Academy of Sciences.

Mobilization of Endogenous Retroviruses in Mice after Infection with an Exogenous Retrovirus

K. Rosenke, K. Virtaneva, K. Barbian, 2008, Journal of Virology.

Transcriptome profiling of Plasmodium vivax in Saimiri monkeys identifies potential ligands for invasion

Juliana M. Sá, J. Barnwell, J. Ribeiro, 2019, Proceedings of the National Academy of Sciences.

Endogenous intrahepatic IFNs and association with IFN-free HCV treatment outcome.

L. Prokunina-Olsson, Honghui Wang, A. Fauci, 2014, The Journal of clinical investigation.

Limited Transcriptional Responses of Rickettsia rickettsii Exposed to Environmental Stimuli

T. Hackstadt, D. Sturdevant, K. Virtaneva, 2009, PloS one.

Sequencing, Annotation and Analysis of the Syrian Hamster (Mesocricetus auratus) Transcriptome

M. Katze, H. Ebihara, H. Feldmann, 2014, PloS one.

Transcriptomic profiling of the digestive tract of the rat flea, Xenopsylla cheopis, following blood feeding and infection with Yersinia pestis

J. Ribeiro, B. J. Hinnebusch, K. Virtaneva, 2020, PLoS neglected tropical diseases.

Progressive myoclonus epilepsy EPM1 locus maps to a 175-kb interval in distal 21q.

R. Myers, D. Cox, J. Weissenbach, 1996, American journal of human genetics.

Interval in Distal 21q

R. Myers, D. Cox, J. Weissenbach, 1996 .

Effect of the Leptin Receptor Q223R Polymorphism on the Host Transcriptome following Infection with Entamoeba histolytica

A. Sher, W. Petri, D. Sturdevant, 2013, Infection and Immunity.

Effect of the Leptin Receptor Q223R Polymorphism on the Host Transcriptome following Infection with Entamoeba histolytica

A. Sher, W. Petri, D. Sturdevant, 2013, Infection and Immunity.

Analysis of the transcriptome of group A Streptococcus in mouse soft tissue infection.

F. Wright, W. Barry, J. Musser, 2006, The American journal of pathology.

Chromoanasynthesis as a cause of Jacobsen syndrome

A. Thurm, S. Anzick, K. Virtaneva, 2020, American journal of medical genetics. Part A.

Group A Streptococcus transcriptome dynamics during growth in human blood reveals bacterial adaptive and survival strategies.

F. Wright, W. Barry, J. Musser, 2005, The American journal of pathology.

Expression and characterization of a B cell growth promoting polypeptide derived from the 12 kDa B cell growth factor gene (BCGF 1)

P. Kovanen, C. Gahmberg, K. Virtaneva, 1995, FEBS letters.

Profound Amplification of Pathogenic Murine Polytropic Retrovirus Release from Coinfected Cells

K. Rosenke, K. Virtaneva, A. Kolokithas, 2012, Journal of Virology.

The genes for CD37, CD53, and R2, all members of a novel gene family, are located on different chromosomes

Heli Nevanlinna, H. Nevanlinna, K. Virtaneva, 2004, Immunogenetics.

Genomic Comparison of Virulent Rickettsia rickettsii Sheila Smith and Avirulent Rickettsia rickettsii Iowa

T. Hackstadt, D. Sturdevant, S. Porcella, 2007, Infection and Immunity.

Group A Streptococcus Vaccine Research

J. Musser, K. Virtaneva, S. Reid, 2003 .

Malaria-associated atypical memory B cells exhibit markedly reduced B cell receptor signaling and effector function

Peter D. Crompton, O. Doumbo, J. Skinner, 2015, eLife.

Clinical Characterization of Host Response to Simian Hemorrhagic Fever Virus Infection in Permissive and Refractory Hosts: A Model for Determining Mechanisms of VHF Pathogenesis

D. O’Connor, James Pettitt, J. Kuhn, 2018, bioRxiv.

Comparative Transcriptomic Response of Primary and Immortalized Macrophages to Murine Norovirus Infection

S. Ricklefs, S. Porcella, K. Virtaneva, 2018, The Journal of Immunology.

Transcriptomic and Innate Immune Responses to Yersinia pestis in the Lymph Node during Bubonic Plague

B. J. Hinnebusch, D. Sturdevant, S. Porcella, 2010, Infection and Immunity.

Therapeutic responses to Roseomonas mucosa in atopic dermatitis may involve lipid-mediated TNF-related epithelial repair

M. Ferrer, T. Myers, R. Silverman, 2020, Science Translational Medicine.

Induction of Salmonella pathogenicity island 1 under different growth conditions can affect Salmonella-host cell interactions in vitro.

E. Fischer, D. Sturdevant, S. Porcella, 2010, Microbiology.

Chromosomal localization of three human genes coding for A15, L6, and S5.7(TAPA1): all members of the transmembrane 4 superfamily of proteins

N. Spurr, A. Aruffo, K. Virtaneva, 2004, Immunogenetics.

miR-182 and miR-10a Are Key Regulators of Treg Specialisation and Stability during Schistosome and Leishmania-associated Inflammation

P. Sethupathy, Y. Belkaid, Isobel S Okoye, 2013, PLoS pathogens.

Achieving sustained virologic response after interferon‐free hepatitis C virus treatment correlates with hepatic interferon gene expression changes independent of cirrhosis

H. Masur, D. Sturdevant, S. Porcella, 2016, Journal of viral hepatitis.

MAdCAM-1 costimulation in the presence of retinoic acid and TGF-β promotes HIV infection and differentiation of CD4+ T cells into CCR5+ TRM-like cells

M. Soares, C. Cicala, J. Arthos, 2023, PLoS pathogens.

Characterization of the cystatin B gene promoter harboring the dodecamer repeat expanded in progressive myoclonus epilepsy, EPM1.

T. Joensuu, K. Virtaneva, J. Palvimo, 2000, Gene.

Evolutionary origin and emergence of a highly successful clone of serotype M1 group a Streptococcus involved multiple horizontal gene transfer events.

J. Musser, M. Graham, P. Sumby, 2005, The Journal of infectious diseases.

Intracellular biology and virulence determinants of Francisella tularensis revealed by transcriptional profiling inside macrophages

D. Crane, E. Fischer, D. Sturdevant, 2009, Cellular microbiology.

Increased circulation time of Plasmodium falciparum underlies persistent asymptomatic infection in the dry season

Peter D. Crompton, Joana S. Martins, M. Llinás, 2020, Nature Medicine.

Simtuzumab treatment of advanced liver fibrosis in HIV and HCV‐infected adults: results of a 6‐month open‐label safety trial

Brad J. Wood, J. Kovacs, H. Masur, 2016, Liver international : official journal of the International Association for the Study of the Liver.

The endogenous Coxiella burnetii plasmid encodes a functional toxin–antitoxin system

R. Heinzen, K. Virtaneva, Kishore Kanakabandi, 2022, Molecular microbiology.

A Survey of Two-Component Systems in Coxiella burnetii Reveals Redundant Regulatory Schemes and a Requirement for an Atypical PhoBR System in Mammalian Cell Infection

R. Heinzen, K. Virtaneva, Kishore Kanakabandi, 2023, Journal of bacteriology.

Rapid Emergence of T Follicular Helper and Germinal Center B Cells Following Antiretroviral Therapy in Advanced HIV Disease

S. Pittaluga, S. Anzick, K. Virtaneva, 2021, Frontiers in Immunology.

Transcriptional Profiling of Human Epithelial Cells Infected with Plasmid-Bearing and Plasmid-Deficient Chlamydia trachomatis

H. Caldwell, D. Sturdevant, S. Porcella, 2014, Infection and Immunity.

The minisatellite expansion mutation in EPM1: resolution of an initial discrepancy. Mutatations in brief no. 186. Online.

A. de la Chapelle, L. Paulin, R. Krahe, 1998, Human mutation.

Peromyscus leucopus mouse brain transcriptome response to Powassan virus infection

S. Porcella, K. Virtaneva, Kishore Kanakabandi, 2017, Journal of NeuroVirology.

Identification of an autotransporter peptidase of Rickettsia rickettsii responsible for maturation of surface exposed autotransporters

T. Hackstadt, S. Ricklefs, D. Sturdevant, 2023, PLoS pathogens.

Original Articles Forthcoming Papers in Cellular Microbiology Original Articles Vaccinia-induced Epidermal Growth Factor Receptor-mek Signalling and the Anti-apoptotic Protein F1l Synergize to Suppress Cell Death during Infection Thematic Reviews: Modelling Pathogenesis Resistance to Non-oxidative K

H. Augustin, F. Stadermann, C. Louis, 2022 .

Pathogenesis and outcome of VA1 astrovirus infection in the human brain are defined by disruption of neural functions and imbalanced host immune responses

K. Wollenberg, A. Nath, M. Weller, 2023, PLoS pathogens.

Analysis of the transcriptome of group A Streptococcus in mouse soft tissue infection.

F. Wright, W. Barry, J. Musser, 2006, The American journal of pathology.

Endogenous intrahepatic IFNs and association with IFN-free HCV treatment outcome.

L. Prokunina-Olsson, Honghui Wang, A. Fauci, 2014, The Journal of clinical investigation.

Intracellular biology and virulence determinants of Francisella tularensis revealed by transcriptional profiling inside macrophages

D. Crane, E. Fischer, D. Sturdevant, 2009, Cellular microbiology.

Recurrent Granulibacter bethesdensis Infections and Chronic Granulomatous Disease

S. Holland, P. Murray, D. Greenberg, 2010, Emerging infectious diseases.

MAdCAM-1 Co-stimulation Combined with Retinoic Acid and TGF-β Induces Blood CD8+ T cells to Adopt a Gut CD101+ TRM Phenotype.

C. Cicala, J. Arthos, K. Virtaneva, 2024, Mucosal immunology.

Endogenous intrahepatic IFNs and association with IFN-free HCV treatment outcome.

L. Prokunina-Olsson, Honghui Wang, A. Fauci, 2014, The Journal of clinical investigation.