Thomas Van Parys

Arabidopsis Ensemble Reverse-Engineered Gene Regulatory Network Discloses Interconnected Transcription Factors in Oxidative Stress[W]

Frank Van Breusegem, Yves Van de Peer, Thomas Van Parys, 2014, Plant Cell.

GenomeView: a next-generation genome browser

Y. Saeys, J. Galagan, Y. van de Peer, 2011, Nucleic acids research.

PLAZA: A Comparative Genomics Resource to Study Gene and Genome Evolution in Plants[W]

Y. van de Peer, K. Vandepoele, L. Sterck, 2009, The Plant Cell Online.

Characterizing regulatory path motifs in integrated networks using perturbational data

Yves Van de Peer, Anagha Joshi, Tom Michoel, 2010, Genome Biology.

The Plant PTM Viewer, a central resource for exploring plant protein modifications.

P. Willems, F. Van Breusegem, K. Gevaert, 2019, The Plant journal : for cell and molecular biology.

MorphDB: Prioritizing Genes for Specialized Metabolism Pathways and Gene Ontology Categories in Plants

Ron Shamir, David Amar, Arthur Zwaenepoel, 2018, Front. Plant Sci..

hfAIM: A reliable bioinformatics approach for in silico genome-wide identification of autophagy-associated Atg8-interacting motifs in various organisms

Y. van de Peer, G. Galili, O. Tzfadia, 2016, Autophagy.

Top 10 metrics for life science software good practices

Rafael C. Jimenez, Pedro L. Fernandes, Manuel Corpas, 2016, F1000Research.

hfAIM: A reliable bioinformatics approach for in silico genome-wide identification of autophagy-associated Atg8-interacting motifs in various organisms

G. Galili, O. Tzfadia, Thomas Van Parys, 2016, Autophagy.