V. Voillet

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Integrated Analysis of Proteomic and Transcriptomic Data Highlights Late Fetal Muscle Maturation Process*

Laurence Liaubet, Valentin Voillet, Laurianne Canario, 2018, Molecular & Cellular Proteomics.

A Targeted Multi-omic Analysis Approach Measures Protein Expression and Low-Abundance Transcripts on the Single-Cell Level

R. Gottardo, A. Tyznik, M. Prlic, 2019, bioRxiv.

Multi-Omics Resolves a Sharp Disease-State Shift between Mild and Moderate COVID-19

Mark M. Davis, John C. Earls, N. Price, 2020, Cell.

A targeted multi-omic analysis approach measures protein expression and low abundance transcripts on the single cell level

R. Gottardo, A. Tyznik, M. Prlic, 2019, bioRxiv.

A new approach of gene co-expression network inference reveals significant biological processes involved in porcine muscle development in late gestation

L. Liaubet, V. Voillet, M. Marti-Marimon, 2018, Scientific Reports.

Muscle transcriptomic investigation of late fetal development identifies candidate genes for piglet maturity

M. Sancristobal, L. Liaubet, Y. Lippi, 2014, BMC Genomics.

Multiomic Immunophenotyping of COVID-19 Patients Reveals Early Infection Trajectories

Raphael Gottardo, Nathan D. Price, Jennifer Hadlock, 2020, bioRxiv.

Engineered Adoptive T-cell Therapy Prolongs Survival in a Preclinical Model of Advanced-Stage Ovarian Cancer

R. Gottardo, P. Greenberg, C. Drescher, 2019, Cancer Immunology Research.

Development of a clinically relevant ovarian cancer model incorporating surgical cytoreduction to evaluate treatment of micro-metastatic disease.

R. Gottardo, P. Greenberg, V. Voillet, 2020, Gynecologic oncology.

Mucosal viral infection induces a regulatory T cell activation phenotype distinct from tissue residency in mouse and human tissues

M. Prlic, V. Voillet, J. Erickson, 2022, Mucosal Immunology.

Extricating human tumour immune alterations from tissue inflammation

R. Gottardo, M. Prlic, A. Rongvaux, 2022, Nature.

Abstract CT131: A phase I study of adoptive immunotherapy for advanced ROR1+ malignancies with defined subsets of autologous T cells expressing a ROR1-specific chimeric antigen receptor (ROR1-CAR)

R. Gottardo, D. Maloney, R. Pierce, 2018, Clinical Trials.

Achieving intracellular cytokine staining assay concordance on two continents to assess HIV vaccine‐induced T‐cell responses

M. McElrath, Yunda Huang, V. Voillet, 2022, Journal of leukocyte biology.

An In Vivo Model of Human Macrophages in Metastatic Melanoma

W. J. Valente, J. Bielas, R. Gottardo, 2022, The Journal of Immunology.

Targeting an alternate Wilms’ tumor antigen 1 peptide bypasses immunoproteasome dependency

Thomas M. Schmitt, J. Bielas, M. Bar, 2022, Science Translational Medicine.

T cell receptor gene therapy targeting WT1 prevents acute myeloid leukemia relapse post-transplant

Thomas M. Schmitt, M. Bar, R. Gottardo, 2019, Nature Medicine.

Comparative analysis of TCR and CAR signaling informs CAR designs with superior antigen sensitivity and in vivo function

Jeffrey R. Whiteaker, Jacob J. Kennedy, A. Paulovich, 2021, Science Signaling.

Phosphoproteomic analysis of chimeric antigen receptor signaling reveals kinetic and quantitative differences that affect cell function

Jeffrey R. Whiteaker, Uliana J. Voytovich, Jacob J. Kennedy, 2018, Science Signaling.

Immunogenic Chemotherapy Enhances Recruitment of CAR-T Cells to Lung Tumors and Improves Antitumor Efficacy when Combined with Checkpoint Blockade.

A. M. Houghton, R. Gottardo, S. Furlan, 2020, Cancer cell.

Acquired cancer resistance to combination immunotherapy from transcriptional loss of class I HLA

W. J. Valente, J. Bielas, R. Gottardo, 2018, Nature Communications.

Handling missing rows in multi-omics data integration: multiple imputation in multiple factor analysis framework

Philippe C. Besse, L. Liaubet, V. Voillet, 2016, BMC Bioinformatics.

PD-1 and TIGIT coexpression identifies a circulating CD8 T cell subset predictive of response to anti-PD-1 therapy

R. Gottardo, S. Riddell, B. Dréno, 2020, Journal for ImmunoTherapy of Cancer.

A faithful in vivo model of human macrophages in metastatic melanoma

W. J. Valente, J. Bielas, R. Gottardo, 2021, bioRxiv.

Acquired cancer resistance to combination immunotherapy from transcriptional loss of class I HLA

W. J. Valente, J. Bielas, R. Gottardo, 2018, Nature Communications.

Clonal kinetics and single-cell transcriptional profiling of CAR-T cells in patients undergoing CD19 CAR-T immunotherapy

Mark R. Enstrom, P. Linsley, R. Gottardo, 2020, Nature Communications.

Human MAIT cells exit peripheral tissues and recirculate via lymph in steady state conditions.

R. Gottardo, M. Betts, Chloe K. Slichter, 2018, JCI insight.

Handling missing rows in multi-omics data integration: multiple imputation in multiple factor analysis framework

Ignacio González, Philippe Besse, Laurence Liaubet, 2016, BMC Bioinformatics.

Muscle transcriptomic investigation of late fetal development identifies candidate genes for piglet maturity

M. Sancristobal, L. Liaubet, Y. Lippi, 2014, BMC Genomics.

The human memory T cell compartment changes across tissues of the female reproductive tract

R. Gottardo, L. Pattacini, V. Voillet, 2021, Mucosal Immunology.

Innate immune signatures to a partially-efficacious HIV vaccine predict correlates of HIV-1 infection risk

Lindsay N. Carpp, J. Kublin, M. McElrath, 2021, PLoS pathogens.

Comparing the intestinal transcriptome of Meishan and Large White piglets during late fetal development reveals genes involved in glucose and lipid metabolism and immunity as valuable clues of intestinal maturity

Laurence Liaubet, Valentin Voillet, Hélène Quesnel, 2017, BMC Genomics.

Dysfunctional effector memory CD8 T cells in the bronchoalveolar compartment of people living with HIV

T. Ndung’u, K. Nyamande, V. Voillet, 2023, bioRxiv.

Signaling via a CD27-TRAF2-SHP-1 axis during naive T cell activation promotes memory-associated gene regulatory networks.

C. Correnti, V. Voillet, Vishaka Muhunthan, 2024, Immunity.