K. D. Preter

发表

SCORPIUS improves trajectory inference and identifies novel modules in dendritic cell development

Y. Saeys, B. Lambrecht, Robrecht Cannoodt, 2016, bioRxiv.

Detection of DNA copy number alterations in cancer by array comparative genomic hybridization

Frank Speleman, Katleen De Preter, Nadine Van Roy, 2007 .

The RNA Atlas, a single nucleotide resolution map of the human transcriptome

G. Schroth, Y. Saeys, J. Kjems, 2019, bioRxiv.

Quantification of MYCN, DDX1, and NAG Gene Copy Number in Neuroblastoma Using a Real-Time Quantitative PCR Assay

F. Speleman, J. Vandesompele, J. Lunec, 2002, Modern Pathology.

Outcome Prediction of Children with Neuroblastoma using a Multigene Expression Signature, a Retrospective SIOPEN/COG/ GPOH Study

A. Naranjo, F. Speleman, J. Vandesompele, 2011 .

ID2 expression in neuroblastoma does not correlate to MYCN levels and lacks prognostic value

F. Speleman, J. Vandesompele, H. Axelson, 2003, Oncogene.

Computational deconvolution of transcriptomics data from mixed cell populations

Francisco Avila Cobos, Jo Vandesompele, Pieter Mestdagh, 2018, Bioinform..

CADM 1 is a strong neuroblastoma candidate gene that maps within a 3 . 72 Mb critical region of loss on 11 q 23 .

F. Speleman, J. Vandesompele, A. Paepe, 2019 .

Differential module analysis in neuroblastoma regulatory networks

Y. Saeys, Robrecht Cannoodt, K. D. Preter, 2014 .

Clinical Cancer esearch an Cancer Biology a-analysis of Neuroblastomas Reveals a Skewed ALK R ation Spectrum in Tumors with MYCN Amplification

Vermeulen, F. Speleman, J. Vandesompele, 2010 .

DNA Copy Number Changes and Beyond

F. Speleman, K. D. Preter, A. Fieuw, 2015 .

arrayCGHbase: an analysis platform for comparative genomic hybridization microarrays

Bart De Moor, Yves Moreau, Jo Vandesompele, 2005, BMC Bioinformatics.

Biallelic and monoallelic ESR2 variants associated with 46,XY disorders of sex development

L. Looijenga, H. Stoop, K. De Bosscher, 2017, Genetics in Medicine.

Gene sets enrichment analysis of chromosomal regions

Y. Moreau, F. Speleman, J. Vandesompele, 2008 .

Biallelic and monoallelic ESR2 variants associated with 46,XY disorders of sex development

L. Looijenga, H. Stoop, K. De Bosscher, 2018, Genetics in Medicine.

regionsfor detection of mRNA expression imbalance Expression imbalance map: a new visualization

S. Ishikawa, Kunihiro Nishimura, H. Aburatani, 2015 .

The cell cycle in neuroblastoma : from genomic aberrations to targeted intervention

F. Speleman, R. Versteeg, H. Caron, 2009 .

Exon-level expression analyses identify MYCN and NTRK1 as major determinants of alternative exon usage and robustly predict primary neuroblastoma outcome

K. Morik, F. Speleman, J. Vandesompele, 2012, British Journal of Cancer.

Opportunities and challenges in interpretable deep learning for drug sensitivity prediction of cancer cells

K. De Preter, V. Vermeirssen, K. D. Preter, 2022, Frontiers in Bioinformatics.

The MYCN/miR-26a-5p/LIN28B regulatory axis controls MYCN-driven LIN28B upregulation in neuroblastoma

F. Speleman, J. Vandesompele, K. D. Preter, 2014 .

A versatile method for circulating cell-free DNA methylome profiling by reduced representation bisulfite sequencing

N. Callewaert, K. De Preter, K. D. Preter, 2019, bioRxiv.

Cross-Cohort Analysis Identifies a TEAD4-MYCN Positive Feedback Loop as the Core Regulatory Element of High-Risk Neuroblastoma.

Mariano J. Alvarez, J. Khan, Jun S. Wei, 2018, Cancer discovery.

RNA pre-amplification enables large-scale RT-qPCR gene-expression studies on limiting sample amounts

F. Speleman, J. Vandesompele, F. Pattyn, 2009 .

Comparison of miRNA Profiles of Microdissected Hodgkin/Reed-Sternberg Cells and Hodgkin Cell Lines Versus CD77+ B-Cells Reveals a Distinct Subset of Differentially Expressed miRNAs

F. Speleman, J. Vandesompele, B. Poppe, 2008 .