S. Dequin

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A population genomics insight into the Mediterranean origins of wine yeast domestication

A. Couloux, D. Bensasson, B. Turchetti, 2015, Molecular ecology.

A comparative transcriptomic, fluxomic and metabolomic analysis of the response of Saccharomyces cerevisiae to increases in NADPH oxidation

V. Fromion, A. Goelzer, M. Celton, 2012, BMC Genomics.

Cofactor engineering in Saccharomyces cerevisiae: Expression of a H2O-forming NADH oxidase and impact on redox metabolism.

S. Dequin, S. Heux, R. Cachon, 2006, Metabolic engineering.

Functional analysis of the ALD gene family of Saccharomyces cerevisiae during anaerobic growth on glucose: the NADP+-dependent Ald6p and Ald5p isoforms play a major role in acetate formation.

S. Dequin, Florence Saint-Prix, Linda Bönquist, 2004, Microbiology.

Reversal of coenzyme specificity of 2,3‐butanediol dehydrogenase from Saccharomyces cerevisae and in vivo functional analysis

S. Dequin, M. Ehsani, María Fernández, 2009, Biotechnology and bioengineering.

Eukaryote-to-eukaryote gene transfer events revealed by the genome sequence of the wine yeast Saccharomyces cerevisiae EC1118

Brigitte Cambon, Emmanuelle Beyne, Jean-Luc Legras, 2009, Proceedings of the National Academy of Sciences.

Adaptation of S. cerevisiae to Fermented Food Environments Reveals Remarkable Genome Plasticity and the Footprints of Domestication

A. Couloux, T. Gabaldón, M. Marcet-Houben, 2018, Molecular biology and evolution.

Intrastrain genomic and phenotypic variability of the commercial Saccharomyces cerevisiae strain Zymaflore VL1 reveals microevolutionary adaptation to vineyard environments.

Manuel A. S. Santos, L. Carreto, S. Dequin, 2015, FEMS yeast research.

A novel fungal family of oligopeptide transporters identified by functional metatranscriptomics of soil eukaryotes

L. Fraissinet-Tachet, R. Marmeisse, S. Dequin, 2011, The ISME Journal.

Diversity and adaptive evolution of Saccharomyces wine yeast: a review

S. Dequin, S. Marsit, 2015, FEMS yeast research.

Genomic signatures of adaptation to wine biological ageing conditions in biofilm‐forming flor yeasts

P. Gladieux, J. Legras, S. Dequin, 2017, Molecular ecology.

Construction of a flocculating yeast for fructose production from inulin

S. Dequin, F. Remize, S. Schorr-Galindo, 1998, Biotechnology Letters.

The yeast mating-type switching endonuclease HO is a domesticated member of an unorthodox homing genetic element family

Kevin P. Byrne, K. H. Wolfe, S. Dequin, 2020, bioRxiv.

Computational Models for Prediction of Yeast Strain Potential for Winemaking from Phenotypic Profiles

B. Zupan, L. Umek, S. Dequin, 2013, PloS one.

Glycerol formation during wine fermentation is mainly linked to Gpd1p and is only partially controlled by the HOG pathway

S. Dequin, F. Remize, B. Cambon, 2003, Yeast.

Mixed Lactic Acid–Alcoholic Fermentation by Saccharomyes cerevisiae Expressing the Lactobacillus casei L(+)–LDH

P. Barré, S. Dequin, 1994, Bio/Technology.

Analysis of the chromosomal DNA polymorphism of wine strains of Saccharomyces cerevisiae

S. Dequin, B. Blondin, C. Bidenne, 1992, Current Genetics.

Flor Yeast: New Perspectives Beyond Wine Aging

J. Moreno, J. Legras, S. Dequin, 2016, Front. Microbiol..

The yeast mating-type switching endonuclease HO is a domesticated member of an unorthodox homing genetic element family

Kevin P. Byrne, K. H. Wolfe, S. Dequin, 2020, eLife.

Characterization of Schizosaccharomyces pombe Malate Permease by Expression in Saccharomyces cerevisiae

P. Barré, S. Dequin, C. Camarasa, 2001, Applied and Environmental Microbiology.

Engineering of 2,3-Butanediol Dehydrogenase To Reduce Acetoin Formation by Glycerol-Overproducing, Low-Alcohol Saccharomyces cerevisiae

S. Dequin, M. Ehsani, María Fernández, 2009, Applied and Environmental Microbiology.

The Saccharomyces cerevisiae zinc factor protein Stb5p is required as a basal regulator of the pentose phosphate pathway.

S. Dequin, V. Galeote, A. Cadiere, 2010, FEMS yeast research.

Enantioselective synthesis of vicinal (R,R)-diols by yeast butanediol dehydrogenase

S. Dequin, X. Parés, J. Biosca, 2019 .

Quantitative 13C‐isotope labelling‐based analysis to elucidate the influence of environmental parameters on the production of fermentative aromas during wine fermentation

A. Bloem, S. Dequin, I. Sanchez, 2017, Microbial biotechnology.

Glucose utilization of strains lacking PGI1 and expressing a transhydrogenase suggests differences in the pentose phosphate capacity among Saccharomyces cerevisiae strains.

S. Dequin, S. Heux, A. Cadiere, 2008, FEMS yeast research.

Effects of GPD 1 Overexpression in Saccharomyces cerevisiae Commercial Wine Yeast Strains Lacking ALD 6 Genes

S. Dequin, F. Remize, C. Camarasa, 2005 .

Construction of an EBNA-producing line of well-differentiated human hepatoma cells and of appropriate Epstein-Barr virus-based shuttle vectors.

G. Lutfalla, S. Dequin, R. Bertolotti, 1989, Gene.

Aborting meiosis overcomes hybrid sterility

S. Loeillet, A. Nicolas, Jia-Xing Yue, 2020, bioRxiv.

Management of multiple nitrogen sources during wine fermentation by S. cerevisiae

A. Bloem, S. Dequin, I. Sanchez, 2016 .

Metabolic analysis of S. cerevisiae strains engineered for malolactic fermentation

P. Barré, S. Dequin, C. Camarasa, 1997, FEBS letters.

Control of lactate production by Saccharomyces cerevisiae expressing a bacterial LDH gene

S. Colombié, S. Dequin, J. Sablayrolles, 2003 .

Sequential Use of Nitrogen Compounds by Saccharomyces cerevisiae during Wine Fermentation: a Model Based on Kinetic and Regulation Characteristics of Nitrogen Permeases

S. Dequin, Thibault Nidelet, I. Sanchez, 2012, Applied and Environmental Microbiology.

Acidification of Grape Musts by Saccharomyces cerevisiae Wine Yeast Strains Genetically Engineered to Produce Lactic Acid

P. Barré, S. Dequin, E. Baptista, 1999, American Journal of Enology and Viticulture.

Specific Phenotypic Traits of Starmerella bacillaris Related to Nitrogen Source Consumption and Central Carbon Metabolite Production during Wine Fermentation

L. Cocolin, A. Bloem, S. Dequin, 2018, Applied and Environmental Microbiology.

Engineering a Saccharomyces cerevisiae Wine Yeast That Exhibits Reduced Ethanol Production during Fermentation under Controlled Microoxygenation Conditions

S. Dequin, S. Heux, R. Cachon, 2006, Applied and Environmental Microbiology.

Malolactic fermentation by engineered Saccharomyces cerevisiae as compared with engineered Schizosaccharomyces pombe

P. Barré, V. Schaeffer, S. Dequin, 1996, Yeast.

Reducing alcohol levels in wines through rational and evolutionary engineering of Saccharomyces cerevisiae.

S. Dequin, M. Ehsani, A. Cadiere, 2015, International journal of food microbiology.

Survey of molecular methods for the typing of wine yeast strains.

M. Casal, S. Dequin, D. Schuller, 2004, FEMS microbiology letters.

A comparative transcriptomic, fluxomic and metabolomic analysis of the response of Saccharomyces cerevisiae to increases in NADPH oxidation

V. Fromion, A. Goelzer, M. Celton, 2012, BMC Genomics.

Glycerol Overproduction by Engineered Saccharomyces cerevisiae Wine Yeast Strains Leads to Substantial Changes in By-Product Formation and to a Stimulation of Fermentation Rate in Stationary Phase

P. Barré, S. Dequin, F. Remize, 1999, Applied and Environmental Microbiology.

Cloning, sequencing and analysis of the yeastS. uvarum ERG10 gene encoding acetoacetyl CoA thiolase

S. Dequin, R. Gloeckler, Christopher J. Herberte, 1988, Current Genetics.

The potential of genetic engineering for improving brewing, wine-making and baking yeasts

S. Dequin, S. Dequin, 2001, Applied Microbiology and Biotechnology.

The genomes of fermentative Saccharomyces.

S. Casaregola, S. Dequin, 2011, Comptes rendus biologies.

Ecology, Diversity and Applications of Saccharomyces Yeasts in Food and Beverages

J. Legras, S. Dequin, C. Camarasa, 2017 .

Role of Saccharomyces cerevisiae Oxidoreductases Bdh1p and Ara1p in the Metabolism of Acetoin and 2,3-Butanediol

L. Sumoy, S. Dequin, X. Parés, 2009, Applied and Environmental Microbiology.

Biodiversity of Saccharomyces yeast strains from grape berries of wine-producing areas using starter commercial yeasts.

M. Casal, S. Dequin, B. Cambon, 2007, FEMS yeast research.

Dissemination and survival of commercial wine yeast in the vineyard: a large-scale, three-years study.

M. Casal, S. Dequin, B. Cambon, 2005, FEMS yeast research.

Modulation of Glycerol and Ethanol Yields During Alcoholic Fermentation in Saccharomyces cerevisiae Strains Overexpressed or Disrupted for GPD1 Encoding Glycerol 3‐Phosphate Dehydrogenase

P. Barré, S. Dequin, F. Remize, 1997, Yeast.

Lipids modulate acetic acid and thiol final concentrations in wine during fermentation by Saccharomyces cerevisiae × Saccharomyces kudriavzevii hybrids

J. Legras, S. Dequin, P. Rigou, 2018, AMB Express.

Cloning, sequence and expression of the gene encoding the malolactic enzyme from Lactococcus lactis

P. Barré, S. Dequin, B. Blondin, 1993, FEBS letters.

Deciphering the Molecular Basis of Wine Yeast Fermentation Traits Using a Combined Genetic and Genomic Approach

Christian Brion, S. Dequin, H. Chiapello, 2011, G3: Genes | Genomes | Genetics.

FSY1, a horizontally transferred gene in the Saccharomyces cerevisiae EC1118 wine yeast strain, encodes a high-affinity fructose/H+ symporter.

Christian Brion, S. Dequin, P. Gonçalves, 2010, Microbiology.

Combined effects of nutrients and temperature on the production of fermentative aromas by Saccharomyces cerevisiae during wine fermentation

Jean-Roch Mouret, Jean-Marie Sablayrolles, Sylvie Dequin, 2015, Applied Microbiology and Biotechnology.

Enantioselective Synthesis of Vicinal (R,R)-Diols by Saccharomyces cerevisiae Butanediol Dehydrogenase

Sylvie Dequin, S. Dequin, X. Parés, 2016, Applied and Environmental Microbiology.

Engineering of the Pyruvate Dehydrogenase Bypass inSaccharomyces cerevisiae: Role of the Cytosolic Mg2+ and Mitochondrial K+ Acetaldehyde Dehydrogenases Ald6p and Ald4p in Acetate Formation during Alcoholic Fermentation

Sylvie Dequin, E. Andrieu, S. Dequin, 2000, Applied and Environmental Microbiology.

Reduction of Ethanol Yield and Improvement of Glycerol Formation by Adaptive Evolution of the Wine Yeast Saccharomyces cerevisiae under Hyperosmotic Conditions

Sylvie Dequin, S. Dequin, Anne Ortiz-Julien, 2014, Applied and Environmental Microbiology.

Stress effect of ethanol on fermentation kinetics by stationary-phase cells of Saccharomyces cerevisiae

S. Dequin, J. Sablayrolles, B. Blondin, 2001, Biotechnology Letters.

Phenotypic Landscape of Saccharomyces cerevisiae during Wine Fermentation: Evidence for Origin-Dependent Metabolic Traits

S. Dequin, I. Sanchez, C. Camarasa, 2011, PloS one.

Evolutionary Advantage Conferred by an Eukaryote-to-Eukaryote Gene Transfer Event in Wine Yeasts

A. Couloux, J. Legras, S. Dequin, 2015, Molecular biology and evolution.

Fungi as a Source of Food.

T. Giraud, J. Dupont, F. Richard, 2017, Microbiology spectrum.

Amplification of a Zygosaccharomyces bailii DNA Segment in Wine Yeast Genomes by Extrachromosomal Circular DNA Formation

S. Casaregola, J. Legras, S. Dequin, 2011, PloS one.

A set of haploid strains available for genetic studies of Saccharomyces cerevisiae flor yeasts.

J. Legras, S. Dequin, G. Zara, 2016, FEMS yeast research.

Glycerol export and glycerol-3-phosphate dehydrogenase, but not glycerol phosphatase, are rate limiting for glycerol production in Saccharomyces cerevisiae.

S. Dequin, F. Remize, F Remize, 2001, Metabolic engineering.

Global gene expression during short‐term ethanol stress in Saccharomyces cerevisiae

S. Dequin, H. Alexandre, B. Blondin, 2001, FEBS letters.

Sfl1p acts as an activator of the HSP30 gene in Saccharomyces cerevisiae

S. Dequin, H. Alexandre, P. Delobel, 2007, Current Genetics.

Genetic characterization of commercial Saccharomyces cerevisiae isolates recovered from vineyard environments

M. Casal, S. Dequin, B. Cambon, 2007, Yeast.

QTL mapping of volatile compound production in Saccharomyces cerevisiae during alcoholic fermentation

J. Legras, S. Dequin, I. Sanchez, 2018, BMC Genomics.

evolution of Saccharomyces cerevisiae wine yeast under

S. Dequin, A. Ortiz‐Julien, Valentin Tilloy, 2014 .

Effects of GPD1 Overexpression in Saccharomyces cerevisiae Commercial Wine Yeast Strains Lacking ALD6 Genes

S. Dequin, F. Remize, C. Camarasa, 2006, Applied and Environmental Microbiology.

Aborting meiosis allows recombination in sterile diploid yeast hybrids

S. Loeillet, A. Nicolas, Jia-Xing Yue, 2021, Nature Communications.

Genome of Saccharomyces cerevisiae and Related Yeasts

J. Legras, S. Dequin, A. Querol, 2009 .

Ecological survey of Saccharomyces cerevisiae strains from vineyards in the Vinho Verde Region of Portugal.

M. Casal, S. Dequin, D. Schuller, 2005, FEMS microbiology ecology.

Exploring the potential of Saccharomyces eubayanus as a parent for new interspecies hybrid strains in winemaking

S. Dequin, K. Krogerus, F. Magalhães, 2017, FEMS yeast research.

Evolutionary engineered Saccharomyces cerevisiae wine yeast strains with increased in vivo flux through the pentose phosphate pathway.

Sylvie Dequin, Carole Camarasa, S. Dequin, 2011, Metabolic engineering.

14 – Wine yeasts

S. Dequin, J. Salmon, Huu-Vang Nguyen, 2003 .

Stuck fermentation: development of a synthetic stuck wine and study of a restart procedure.

S. Dequin, I. Sanchez, V. Galeote, 2013, International journal of food microbiology.

Yeast multistress resistance and lag-phase characterisation during wine fermentation

J. Legras, S. Dequin, I. Sanchez, 2017, FEMS yeast research.

Investigation by 13C-NMR and tricarboxylic acid (TCA) deletion mutant analysis of pathways for succinate formation in Saccharomyces cerevisiae during anaerobic fermentation.

Jean-Philippe Grivet, Sylvie Dequin, Carole Camarasa, 2003, Microbiology.

Malolactic Fermentation by cerevisiae as Compared with Schizosaccharomyces pombe Engineered Engineered Saccharomy ces

P. Barré, V. Schaeffer, S. Dequin, 1996 .

Re‐assessment of the influence of yeast strain and environmental factors on glycerol production in wine

S. Dequin, F. Remize, J. Sablayrolles, 2000, Journal of applied microbiology.

Horizontally acquired oligopeptide transporters favour adaptation of Saccharomyces cerevisiae wine yeast to oenological environment.

S. Dequin, I. Sanchez, V. Galeote, 2016, Environmental microbiology.

Natural Yeast Promoter Variants Reveal Epistasis in the Generation of Transcriptional-Mediated Noise and Its Potential Benefit in Stressful Conditions

J. François, Jian Liu, S. Dequin, 2015, Genome biology and evolution.

Adaptability of the Saccharomyces cerevisiae yeasts to wine fermentation conditions relies on their strong ability to consume nitrogen

Francisco A. Cubillos, F. Cubillos, C. Martínez, 2018, PloS one.

A constraint-based model analysis of the metabolic consequences of increased NADPH oxidation in Saccharomyces cerevisiae.

V. Fromion, A. Goelzer, M. Celton, 2012, Metabolic engineering.

New Insights into γ-Aminobutyric Acid Catabolism: Evidence for γ-Hydroxybutyric Acid and Polyhydroxybutyrate Synthesis in Saccharomyces cerevisiae

Bruno Blondin, Sylvie Dequin, Tristan Rossignol, 2009, Applied and Environmental Microbiology.

Cloning and analysis of a FLO5 flocculation gene from S. cerevisiae

P. Barré, S. Dequin, F. Bidard, 1994, Current Genetics.

Key role of lipid management in nitrogen and aroma metabolism in an evolved wine yeast strain

Jean-Roch Mouret, Jean-Marie Sablayrolles, Sylvie Dequin, 2016, Microbial Cell Factories.

Influence of nutrients and temperature on the production of fermentative aromas in winemaking conditions by an evolved wine strain of Saccharomyces cerevisiae

S. Dequin, I. Sanchez, J. Sablayrolles, 2014 .

DNA sequences in chromosomes 11 and VII code for pyruvate carboxylase isoenzymes in Saccharomyces cerevisiae: analysis of pyruvate carboxylase-deficient strains

S. Dequin, J. Salmon, R. Stucka, 1991, Molecular and General Genetics MGG.

Dynamics and quantitative analysis of the synthesis of fermentative aromas by an evolved wine strain of Saccharomyces cerevisiae

S. Dequin, J. Sablayrolles, J. Mouret, 2014, Yeast.

Pilot-scale evaluation the enological traits of a novel, aromatic wine yeast strain obtained by adaptive evolution.

Sylvie Dequin, Evelyne Aguera, S. Dequin, 2012, Food microbiology.

Genome Sequence of the Food Spoilage Yeast Zygosaccharomyces bailii CLIB 213T

C. Neuvéglise, S. Dequin, H. Devillers, 2013, Genome Announcements.

Role in anaerobiosis of the isoenzymes for Saccharomyces cerevisiae fumarate reductase encoded by OSM1 and FRDS1

S. Dequin, C. Camarasa, Virginie Faucet, 2007, Yeast.

Management of Multiple Nitrogen Sources during Wine Fermentation by Saccharomyces cerevisiae

A. Bloem, S. Dequin, I. Sanchez, 2017, Applied and Environmental Microbiology.

Efficient ammonium uptake and mobilization of vacuolar arginine by Saccharomyces cerevisiae wine strains during wine fermentation

S. Dequin, Thibault Nidelet, I. Sanchez, 2014, Microbial Cell Factories.

Membrane Potential-generating Malate (MleP) and Citrate (CitP) Transporters of Lactic Acid Bacteria Are Homologous Proteins

N. Rachidi, S. Dequin, J. Lolkema, 1997, Journal of Biological Chemistry.

How to adapt winemaking practices to modified grape composition under climate change conditions

S. Dequin, I. Masneuf-Pomarède, M. Bely, 2016 .

Effect of acetoacetyl coa thiolase amplification on sterol synthesis in the yeasts S. cerevisiae and S. uvarum

F. Karst, S. Dequin, M. Servouse, 1988, Biotechnology Letters.

Diversity of Saccharomyces cerevisiae strains isolated from Borassus akeassii palm wines from Burkina Faso in comparison to other African beverages.

J. Legras, S. Dequin, A. Savadogo, 2015, International journal of food microbiology.

Integrating transcriptomics and metabolomics for the analysis of the aroma profiles of Saccharomyces cerevisiae strains from diverse origins

M. Sousa, S. Dequin, I. Sanchez, 2017, BMC Genomics.

Lipids modulate acetic acid and thiol final concentrations in wine during fermentation by Saccharomyces cerevisiae × Saccharomyces kudriavzevii hybrids

J. Legras, S. Dequin, P. Rigou, 2018, AMB Express.

Diversity of flux distribution in central carbon metabolism of S. cerevisiae strains from diverse environments

S. Dequin, Thibault Nidelet, C. Camarasa, 2016, Microbial Cell Factories.

Beyond S. cerevisiae for winemaking: Fermentation-related trait diversity in the genus Saccharomyces.

S. Dequin, C. Camarasa, E. Louis, 2023, Food microbiology.

QTL mapping of modelled metabolic fluxes reveals gene variants impacting yeast central carbon metabolism

J. Legras, S. Dequin, Thibault Nidelet, 2020, Scientific Reports.

Yeast Plasma Membrane Fungal Oligopeptide Transporters Display Distinct Substrate Preferences despite Their High Sequence Identity

S. Paiva, M. Casal, S. Dequin, 2021, Journal of fungi.

The Saccharomyces cerevisiae FLO1 flocculation gene encodes for a cell surface protein

P. Barré, S. Dequin, B. Blondin, 1995, Yeast.

Genome Sequence of Torulaspora microellipsoides CLIB 830T

K. H. Wolfe, C. Neuvéglise, S. Dequin, 2018, Genome Announcements.

EUKARYOTES Draft Genome Sequence of the Basidiomycetous Yeast-Like Fungus Pseudozyma hubeiensis SY62, Which Produces an Abundant Amount of the Biosurfactant Mannosylerythritol Lipids e00409-13

C. Neuvéglise, S. Dequin, Jaeyoung Choi, 2013 .

Efficient ammonium uptake and mobilization of vacuolar arginine by

S. Dequin, Thibault Nidelet, I. Sanchez, 2014 .

Genetic bases for the metabolism of the DMS precursor S-methylmethionine by Saccharomyces cerevisiae.

J. Daran, J. Legras, S. Dequin, 2022, Food microbiology.

Metabolic Impact of Redox Cofactor Perturbations on the Formation of Aroma Compounds in Saccharomyces cerevisiae

A. Bloem, S. Dequin, I. Sanchez, 2015, Applied and Environmental Microbiology.