Takayuki Nojima

发表

Mammalian NET-Seq Reveals Genome-wide Nascent Transcription Coupled to RNA Processing

H. Kimura, M. Carmo-Fonseca, N. Proudfoot, 2015, Cell.

Definition of RNA Polymerase II CoTC Terminator Elements in the Human Genome

N. Proudfoot, Takayuki Nojima, M. Dye, 2013, Cell reports.

Selective Roles of Vertebrate PCF11 in Premature and Full-Length Transcript Termination

N. Brockdorff, J. Wiśniewski, N. Proudfoot, 2018, bioRxiv.

Cross-talks between transcription and post-transcriptional events within a 'mRNA factory'.

Masatoshi Hagiwara, M. Hagiwara, Takayuki Nojima, 2007, Journal of biochemistry.

SCAF4 and SCAF8, mRNA Anti-Terminator Proteins

R. Agami, A. Stewart, N. Proudfoot, 2019, Cell.

RBM24 promotes U1 snRNP recognition of the mutated 5' splice site in the IKBKAP gene of familial dysautonomia.

M. Hagiwara, K. Ohe, N. Kataoka, 2017, RNA.

Rectifier of aberrant mRNA splicing recovers tRNA modification in familial dysautonomia

M. Hagiwara, Tsutomu Suzuki, K. Ohe, 2015, Proceedings of the National Academy of Sciences.

CDK9 and PP2A regulate RNA polymerase II transcription termination and coupled RNA maturation

Marjorie Fournier, A. Furger, Svenja Hester, 2022, EMBO reports.

CDK9 and PP2A regulate RNA polymerase II transcription termination and coupled RNA maturation

A. Furger, Svenja Hester, Takayuki Nojima, 2021, bioRxiv.

PTBP1-activated co-transcriptional splicing controls epigenetic status of pluripotent stem cells.

Takayuki Nojima, E. Makeyev, Camilla Iannone, 2022, Molecular cell.

Enhancers predominantly regulate gene expression during differentiation via transcription initiation.

R. Schwessinger, D. Downes, J. Hughes, 2021, Molecular cell.

RNA Polymerase II Phosphorylated on CTD Serine 5 Interacts with the Spliceosome during Co-transcriptional Splicing

M. Carmo-Fonseca, N. Proudfoot, A. Grosso, 2018, Molecular cell.

Mitochondrial double-stranded RNA triggers antiviral signalling in humans

A. Munnich, M. Teitell, Y. Crow, 2018, Nature.

Spliceostatin A targets SF3b and inhibits both splicing and nuclear retention of pre-mRNA

M. Hagiwara, S. Horinouchi, Minoru Yoshida, 2007, Nature Chemical Biology.

Deregulated Expression of Mammalian lncRNA through Loss of SPT6 Induces R-Loop Formation, Replication Stress, and Cellular Senescence

N. Proudfoot, G. Dujardin, Takayuki Nojima, 2018, Molecular cell.

Distinctive Patterns of Transcription and RNA Processing for Human lincRNAs

Maria Carmo-Fonseca, M. Carmo-Fonseca, N. Proudfoot, 2017, Molecular cell.

Mechanisms of lncRNA biogenesis as revealed by nascent transcriptomics

N. Proudfoot, Takayuki Nojima, 2022, Nature Reviews Molecular Cell Biology.

POINT technology illuminates the processing of polymerase-associated intact nascent transcripts

H. Kimura, M. Carmo-Fonseca, N. Proudfoot, 2020, bioRxiv.

Influenza Virus Mounts a Two-Pronged Attack on Host RNA Polymerase II Transcription

N. Proudfoot, Takayuki Nojima, E. Fodor, 2018, Cell reports.

Splicing Reporter Mice Revealed the Evolutionally Conserved Switching Mechanism of Tissue-Specific Alternative Exon Selection

M. Hagiwara, Takayuki Nojima, A. Takeuchi, 2010, PloS one.

Enhancers predominantly regulate gene expression in vivo via transcription initiation

M. Bender, R. Schwessinger, D. Downes, 2019, bioRxiv.

Herpesvirus protein ICP27 switches PML isoform by altering mRNA splicing

M. Hagiwara, N. Kataoka, Y. Kawaguchi, 2009, Nucleic acids research.

Simultaneous studies of gene expression and alternative polyadenylation in primary human immune cells.

Takayuki Nojima, M. Oliveira, Alexandra Moreira, 2021, Methods in enzymology.

Mammalian NET-seq analysis defines nascent RNA profiles and associated RNA processing genome-wide

M. Carmo-Fonseca, N. Proudfoot, Takayuki Nojima, 2016, Nature Protocols.

CDK12 globally stimulates RNA polymerase II transcription elongation and carboxyl-terminal domain phosphorylation

P. Cramer, B. Schwalb, Takayuki Nojima, 2020, Nucleic acids research.

The Interaction between Cap-binding Complex and RNA Export Factor Is Required for Intronless mRNA Export*

Hiroshi Kimura, Masatoshi Hagiwara, M. Hagiwara, 2007, Journal of Biological Chemistry.

RBM24 promotes U1 snRNP recognition of the mutated 5′ splice site in the IKBKAP gene of familial dysautonomia

M. Hagiwara, K. Ohe, N. Kataoka, 2017, RNA.

Pro-inflammatory polarization and colorectal cancer modulate alternative and intronic polyadenylation in primary human macrophages

N. Proudfoot, Takayuki Nojima, M. Oliveira, 2023, bioRxiv.

Mitochondrial double-stranded RNA triggers antiviral signalling in humans

A. Munnich, M. Teitell, A. Rötig, 2018, Nature.

NUCLEIC ACIDS AND IMMUNITY

N. Proudfoot, J. Rehwinkel, Takayuki Nojima, 2017 .

Single‐Cell Detection of Splicing Events with Fluorescent Splicing Reporters

M. Hagiwara, Takayuki Nojima, H. Kuroyanagi, 2012 .

Mitochondrial double-stranded RNA triggers antiviral signalling in humans

D. Duffy, J. Rehwinkel, Takayuki Nojima, 2018, Nature.

NELF coordinates Pol II transcription termination and DNA replication initiation

Takayuki Nojima, Yasukazu Daigaku, Y. Aoi, 2024, bioRxiv.