F. Matarese

发表

Genetic Drivers of Epigenetic and Transcriptional Variation in Human Immune Cells

Matthew T. Maurano, Warren A. Cheung, Klaudia Walter, 2016, Cell.

Chromatin-Based Classification of Genetically Heterogeneous AMLs into Two Distinct Subtypes with Diverse Stemness Phenotypes

S. Heath, P. Flicek, A. Merkel, 2019, Cell reports.

Quantitative Interaction Proteomics and Genome-wide Profiling of Epigenetic Histone Marks and Their Readers

A. Hyman, M. Mann, J. Olsen, 2010, Cell.

A Probabilistic Model of Transcription Dynamics applied to Estrogen Signalling in Breast Cancer Cells

Neil D. Lawrence, M. Rattray, A. Honkela, 2013 .

Whole-genome bisulfite sequencing of two distinct interconvertible DNA methylomes of mouse embryonic stem cells.

M. Gut, H. Stunnenberg, I. Gut, 2013, Cell stem cell.

eFORGE: A Tool for Identifying Cell Type-Specific Signal in Epigenomic Data

E. Birney, W. Ouwehand, K. Downes, 2016, Cell reports.

Estrogens do not modify MAP kinase-dependent nuclear signaling during stimulation of early G(1) progression in human breast cancer cells.

L. Altucci, F. Bresciani, A. Weisz, 2001, Cancer research.

Genome-wide modeling of transcription kinetics reveals patterns of RNA production delays

Neil D. Lawrence, M. Rattray, A. Honkela, 2015, Proceedings of the National Academy of Sciences.

miR-194-5p/BCLAF1 deregulation in AML tumorigenesis

H. Stunnenberg, J. Martens, L. Altucci, 2017, Leukemia.

Advances in Brief Estrogens Do Not Modify MAP Kinase-dependent Nuclear Signaling during Stimulation of Early G 1 Progression in Human Breast Cancer Cells 1

L. Altucci, F. Bresciani, A. Weisz, 2001 .

Inference of RNA Polymerase II Transcription Dynamics from Chromatin Immunoprecipitation Time Course Data

Neil D. Lawrence, Antti Honkela, Magnus Rattray, 2013, PLoS Comput. Biol..

Integrative Analysis of Deep Sequencing Data Identifies Estrogen Receptor Early Response Genes and Links ATAD3B to Poor Survival in Breast Cancer

Chengyu Liu, Sampsa Hautaniemi, Alejandra Cervera, 2013, PLoS Comput. Biol..

Epigenetic programming of monocyte-to-macrophage differentiation and trained innate immunity

R. Xavier, L. Joosten, C. Wijmenga, 2014, Science.

β-Glucan Reverses the Epigenetic State of LPS-Induced Immunological Tolerance

Vivien A. C. Schoonenberg, M. Netea, S. Heath, 2016, Cell.

Sequential ChIP-bisulfite sequencing enables direct genome-scale investigation of chromatin and DNA methylation cross-talk

Christoph Bock, Alexander Meissner, Hendrik Marks, 2012, Genome research.

Genome-Wide Binding of MBD2 Reveals Strong Preference for Highly Methylated Loci

H. Stunnenberg, N. Hubner, A. Brinkman, 2014, PloS one.

Dnmt3L Antagonizes DNA Methylation at Bivalent Promoters and Favors DNA Methylation at Gene Bodies in ESCs

H. Stunnenberg, F. Matarese, S. Oliviero, 2013, Cell.

Comparative genome-wide DNA methylation analysis of colorectal tumor and matched normal tissues

Thomas Lengauer, M. Esteller, H. Stunnenberg, 2012, Epigenetics.

Distinct signaling pathways mediate stimulation of cell cycle progression and prevention of apoptotic cell death by estrogen in rat pituitary tumor PR1 cells.

D. Sarkar, L. Altucci, F. Bresciani, 2003, Molecular biology of the cell.

5-Hydroxymethylcytosine: a new kid on the epigenetic block?

H. Stunnenberg, F. Matarese, E. Carrillo-de Santa Pau, 2011, Molecular systems biology.

Predicting stimulation-dependent enhancer-promoter interactions from ChIP-Seq time course data

M. Rattray, A. Honkela, H. Stunnenberg, 2017, PeerJ.

RAD21 Cooperates with Pluripotency Transcription Factors in the Maintenance of Embryonic Stem Cell Identity

Herbert Schulz, Matthias Mann, Frank Buchholz, 2011, PloS one.

Potential impact of celiac disease genetic risk factors on T cell receptor signaling in gluten-specific CD4+ T cells

C. Wijmenga, J. Martens, J. van Bergen, 2021, Scientific Reports.

ZMYND8 Co-localizes with NuRD on Target Genes and Regulates Poly(ADP-Ribose)-Dependent Recruitment of GATAD2A/NuRD to Sites of DNA Damage.

H. Stunnenberg, R. Lindeboom, M. Vermeulen, 2016, Cell reports.

Recruitment of the Mammalian Histone-modifying EMSY Complex to Target Genes Is Regulated by ZNF131*

P. V. van Diest, H. Stunnenberg, A. H. Smits, 2016, Journal of Biological Chemistry.

Context-selective death of acute myeloid leukemia cells triggered by the novel hybrid retinoid-HDAC inhibitor MC2392.

H. Stunnenberg, J. Martens, L. Altucci, 2014, Cancer Research.

Death Receptor Pathway Activation and Increase of ROS Production by the Triple Epigenetic Inhibitor UVI5008

H. Stunnenberg, L. Altucci, H. Gronemeyer, 2011, Molecular Cancer Therapeutics.

Preclinical Development Death Receptor Pathway Activation and Increase of ROS Production by the Triple Epigenetic Inhibitor UVI 5008

H. Stunnenberg, L. Altucci, H. Gronemeyer, 2011 .

Erratum: miR-194-5p/BCLAF1 deregulation in AML tumorigenesis

L. Altucci, S. Minucci, A. Di Costanzo, 2017, Leukemia.

ZMYND 8 Co-localizes with NuRD on Target Genes and Regulates Poly ( ADP-Ribose )-Dependent Recruitment ofGATAD 2 A / NuRD toSitesofDNADamage

T. C. Jansen, H. Stunnenberg, M. Vermeulen, 2017 .

ZMYND 8 Co-localizes with NuRD on Target Genes and Regulates Poly ( ADP-Ribose )-Dependent Recruitment of GATAD 2 A / NuRD to Sites of DNA Damage Graphical

H. Stunnenberg, R. Lindeboom, M. Vermeulen, 2016 .

The Hematopoietic Transcription Factors RUNX1 and ERG Prevent AML1-ETO Oncogene Overexpression and Onset of the Apoptosis Program in t(8;21) AMLs.

René A. M. Dirks, H. Stunnenberg, J. Martens, 2016, Cell reports.

Time-resolved analysis of DNA-protein interactions in living cells by UV laser pulses

H. Stunnenberg, J. Martens, L. Altucci, 2017, Scientific Reports.